Protein–RNA interactions for Protein: Q8IX90

SKA3, Spindle and kinetochore-associated protein 3, humanhuman

Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3Q8IX90 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.53□□□□□ -2
SKA3Q8IX90 AP003122.5-201ENST00000527668 3766 ntBASIC2.53□□□□□ -2
SKA3Q8IX90 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SKA3Q8IX90 AL138713.1-201ENST00000624026 2130 ntBASIC2.53□□□□□ -2.01
SKA3Q8IX90 CCT4P2-201ENST00000233836 1548 ntBASIC2.52□□□□□ -2.01
SKA3Q8IX90 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.52□□□□□ -2.01
SKA3Q8IX90 SNORD56.5-201ENST00000364281 72 ntBASIC2.52□□□□□ -2.01
SKA3Q8IX90 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
SKA3Q8IX90 RNU6-1027P-201ENST00000383998 107 ntBASIC2.52□□□□□ -2.01
SKA3Q8IX90 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
SKA3Q8IX90 RNU6-754P-201ENST00000391166 107 ntBASIC2.52□□□□□ -2.01
SKA3Q8IX90 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.52□□□□□ -2.01
SKA3Q8IX90 AL451074.5-201ENST00000415894 435 ntBASIC2.52□□□□□ -2.01
SKA3Q8IX90 UBE2FP1-201ENST00000416536 447 ntBASIC2.52□□□□□ -2.01
SKA3Q8IX90 NDUFB4P7-201ENST00000423198 363 ntBASIC2.52□□□□□ -2.01
SKA3Q8IX90 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC2.52□□□□□ -2.01
SKA3Q8IX90 AL590383.1-201ENST00000428602 75 ntBASIC2.52□□□□□ -2.01
SKA3Q8IX90 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.52□□□□□ -2.01
SKA3Q8IX90 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.52□□□□□ -2.01
SKA3Q8IX90 RPS20P5-201ENST00000434808 360 ntBASIC2.52□□□□□ -2.01
SKA3Q8IX90 TAAR7P-201ENST00000436141 242 ntBASIC2.52□□□□□ -2.01
SKA3Q8IX90 RPL7P36-201ENST00000444633 681 ntBASIC2.52□□□□□ -2.01
SKA3Q8IX90 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.52□□□□□ -2.01
SKA3Q8IX90 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.52□□□□□ -2.01
SKA3Q8IX90 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.52□□□□□ -2.01
SKA3Q8IX90 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.52□□□□□ -2.01
SKA3Q8IX90 RPS29P26-201ENST00000477483 171 ntBASIC2.52□□□□□ -2.01
SKA3Q8IX90 AC011825.1-201ENST00000484967 388 ntBASIC2.52□□□□□ -2.01
SKA3Q8IX90 RPL30P5-201ENST00000494923 336 ntBASIC2.52□□□□□ -2.01
SKA3Q8IX90 AC006445.2-201ENST00000510061 472 ntBASIC2.52□□□□□ -2.01
SKA3Q8IX90 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.52□□□□□ -2.01
SKA3Q8IX90 SNORA31.15-201ENST00000516771 132 ntBASIC2.52□□□□□ -2.01
SKA3Q8IX90 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.52□□□□□ -2.01
SKA3Q8IX90 AP000907.2-201ENST00000530827 353 ntBASIC2.52□□□□□ -2.01
SKA3Q8IX90 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.52□□□□□ -2.01
SKA3Q8IX90 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
SKA3Q8IX90 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.52□□□□□ -2.01
SKA3Q8IX90 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.52□□□□□ -2.01
SKA3Q8IX90 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.52□□□□□ -2.01
SKA3Q8IX90 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.52□□□□□ -2.01
SKA3Q8IX90 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.52□□□□□ -2.01
SKA3Q8IX90 AC012435.1-202ENST00000568772 240 ntBASIC2.52□□□□□ -2.01
SKA3Q8IX90 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.52□□□□□ -2.01
SKA3Q8IX90 AC112187.2-201ENST00000604345 283 ntBASIC2.52□□□□□ -2.01
SKA3Q8IX90 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.52□□□□□ -2.01
SKA3Q8IX90 AC004908.2-201ENST00000609090 574 ntBASIC2.52□□□□□ -2.01
SKA3Q8IX90 AL020991.1-201ENST00000612314 373 ntBASIC2.52□□□□□ -2.01
SKA3Q8IX90 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.52□□□□□ -2.01
SKA3Q8IX90 TUG1_2.1-201ENST00000614234 87 ntBASIC2.52□□□□□ -2.01
SKA3Q8IX90 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.52□□□□□ -2.01
SKA3Q8IX90 AC091953.5-201ENST00000622919 233 ntBASIC2.52□□□□□ -2.01
SKA3Q8IX90 AP000676.3-201ENST00000623299 569 ntBASIC2.52□□□□□ -2.01
SKA3Q8IX90 AC027309.3-201ENST00000623419 351 ntBASIC2.52□□□□□ -2.01
SKA3Q8IX90 AP003122.6-201ENST00000623831 495 ntBASIC2.52□□□□□ -2.01
SKA3Q8IX90 AC091965.5-201ENST00000624785 342 ntBASIC2.52□□□□□ -2.01
SKA3Q8IX90 AC092192.1-201ENST00000633154 1018 ntBASIC2.52□□□□□ -2.01
SKA3Q8IX90 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SKA3Q8IX90 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.52□□□□□ -2.01
SKA3Q8IX90 SDAD1P2-201ENST00000441308 2028 ntBASIC2.52□□□□□ -2.01
SKA3Q8IX90 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SKA3Q8IX90 ZNF833P-201ENST00000424938 1494 ntBASIC2.52□□□□□ -2.01
SKA3Q8IX90 AC096644.4-201ENST00000563417 2912 ntBASIC2.52□□□□□ -2.01
SKA3Q8IX90 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.51□□□□□ -2.01
SKA3Q8IX90 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
SKA3Q8IX90 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SKA3Q8IX90 GNG5P1-201ENST00000255500 204 ntBASIC2.51□□□□□ -2.01
SKA3Q8IX90 RNU6-500P-201ENST00000362349 107 ntBASIC2.51□□□□□ -2.01
SKA3Q8IX90 UBA52P6-201ENST00000399822 382 ntBASIC2.51□□□□□ -2.01
SKA3Q8IX90 AL109755.1-201ENST00000401791 649 ntBASIC2.51□□□□□ -2.01
SKA3Q8IX90 VPS26BP1-201ENST00000417155 755 ntBASIC2.51□□□□□ -2.01
SKA3Q8IX90 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.51□□□□□ -2.01
SKA3Q8IX90 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.51□□□□□ -2.01
SKA3Q8IX90 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.51□□□□□ -2.01
SKA3Q8IX90 AL356867.1-201ENST00000429623 299 ntBASIC2.51□□□□□ -2.01
SKA3Q8IX90 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.51□□□□□ -2.01
SKA3Q8IX90 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.51□□□□□ -2.01
SKA3Q8IX90 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.51□□□□□ -2.01
SKA3Q8IX90 MTCYBP39-201ENST00000437562 491 ntBASIC2.51□□□□□ -2.01
SKA3Q8IX90 NANOGNBP1-201ENST00000448444 480 ntBASIC2.51□□□□□ -2.01
SKA3Q8IX90 RNU7-125P-201ENST00000458760 62 ntBASIC2.51□□□□□ -2.01
SKA3Q8IX90 RPS29P12-201ENST00000460178 152 ntBASIC2.51□□□□□ -2.01
SKA3Q8IX90 AC008481.1-201ENST00000463278 396 ntBASIC2.51□□□□□ -2.01
SKA3Q8IX90 RN7SL297P-201ENST00000483161 293 ntBASIC2.51□□□□□ -2.01
SKA3Q8IX90 RPS3AP22-201ENST00000488297 769 ntBASIC2.51□□□□□ -2.01
SKA3Q8IX90 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.51□□□□□ -2.01
SKA3Q8IX90 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
SKA3Q8IX90 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.51□□□□□ -2.01
SKA3Q8IX90 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.51□□□□□ -2.01
SKA3Q8IX90 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.51□□□□□ -2.01
SKA3Q8IX90 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.51□□□□□ -2.01
SKA3Q8IX90 SNORA74D-201ENST00000516404 141 ntBASIC2.51□□□□□ -2.01
SKA3Q8IX90 AC025881.1-201ENST00000518851 512 ntBASIC2.51□□□□□ -2.01
SKA3Q8IX90 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.51□□□□□ -2.01
SKA3Q8IX90 AC008015.1-201ENST00000555505 465 ntBASIC2.51□□□□□ -2.01
SKA3Q8IX90 AL355836.1-201ENST00000555951 870 ntBASIC2.51□□□□□ -2.01
SKA3Q8IX90 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.51□□□□□ -2.01
SKA3Q8IX90 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.51□□□□□ -2.01
SKA3Q8IX90 AL133153.1-201ENST00000557756 303 ntBASIC2.51□□□□□ -2.01
SKA3Q8IX90 AL158211.1-201ENST00000566763 763 ntBASIC2.51□□□□□ -2.01
SKA3Q8IX90 MIR4307-201ENST00000582802 84 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 170.4 ms