Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC104090.1-201ENST00000506341 1171 ntBASIC2.61□□□□□ -1.99
CCDC50Q8IVM0 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.61□□□□□ -1.99
CCDC50Q8IVM0 RN7SKP40-201ENST00000517211 242 ntBASIC2.61□□□□□ -1.99
CCDC50Q8IVM0 RNU6-840P-201ENST00000517275 65 ntBASIC2.61□□□□□ -1.99
CCDC50Q8IVM0 AL139344.1-201ENST00000605228 195 ntBASIC2.61□□□□□ -1.99
CCDC50Q8IVM0 AL133445.2-201ENST00000611191 527 ntBASIC2.61□□□□□ -1.99
CCDC50Q8IVM0 AC135507.2-201ENST00000612443 309 ntBASIC2.61□□□□□ -1.99
CCDC50Q8IVM0 AC073308.1-201ENST00000623696 305 ntBASIC2.61□□□□□ -1.99
CCDC50Q8IVM0 AC019226.1-201ENST00000625666 515 ntBASIC2.61□□□□□ -1.99
CCDC50Q8IVM0 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.61□□□□□ -1.99
CCDC50Q8IVM0 DDX43P2-201ENST00000604753 1354 ntBASIC2.61□□□□□ -1.99
CCDC50Q8IVM0 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC50Q8IVM0 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC50Q8IVM0 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC50Q8IVM0 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.6□□□□□ -1.99
CCDC50Q8IVM0 RNU4-92P-201ENST00000363783 136 ntBASIC2.6□□□□□ -1.99
CCDC50Q8IVM0 RNU6-636P-201ENST00000384598 107 ntBASIC2.6□□□□□ -1.99
CCDC50Q8IVM0 RNU6-925P-201ENST00000384629 104 ntBASIC2.6□□□□□ -1.99
CCDC50Q8IVM0 RNU6-906P-201ENST00000384700 70 ntBASIC2.6□□□□□ -1.99
CCDC50Q8IVM0 AL109755.1-201ENST00000401791 649 ntBASIC2.6□□□□□ -1.99
CCDC50Q8IVM0 RNU6-516P-201ENST00000411381 104 ntBASIC2.6□□□□□ -1.99
CCDC50Q8IVM0 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC50Q8IVM0 AL365496.1-201ENST00000426885 215 ntBASIC2.6□□□□□ -1.99
CCDC50Q8IVM0 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.6□□□□□ -1.99
CCDC50Q8IVM0 AC007919.1-201ENST00000429380 217 ntBASIC2.6□□□□□ -1.99
CCDC50Q8IVM0 AC098826.1-201ENST00000433943 471 ntBASIC2.6□□□□□ -1.99
CCDC50Q8IVM0 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC50Q8IVM0 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.6□□□□□ -1.99
CCDC50Q8IVM0 BNIP3P2-201ENST00000441221 577 ntBASIC2.6□□□□□ -1.99
CCDC50Q8IVM0 AC009296.1-201ENST00000443146 155 ntBASIC2.6□□□□□ -1.99
CCDC50Q8IVM0 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC50Q8IVM0 MTCO1P27-201ENST00000448269 226 ntBASIC2.6□□□□□ -1.99
CCDC50Q8IVM0 AC104563.1-201ENST00000476147 376 ntBASIC2.6□□□□□ -1.99
CCDC50Q8IVM0 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.6□□□□□ -1.99
CCDC50Q8IVM0 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.6□□□□□ -1.99
CCDC50Q8IVM0 RPS27P26-201ENST00000494583 239 ntBASIC2.6□□□□□ -1.99
CCDC50Q8IVM0 AC119751.4-201ENST00000507498 357 ntBASIC2.6□□□□□ -1.99
CCDC50Q8IVM0 AC093281.2-201ENST00000510153 597 ntBASIC2.6□□□□□ -1.99
CCDC50Q8IVM0 CDC42P4-201ENST00000510507 563 ntBASIC2.6□□□□□ -1.99
CCDC50Q8IVM0 NRON-201ENST00000517270 370 ntBASIC2.6□□□□□ -1.99
CCDC50Q8IVM0 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC50Q8IVM0 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC50Q8IVM0 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC50Q8IVM0 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.6□□□□□ -1.99
CCDC50Q8IVM0 MTCO1P47-201ENST00000523889 1271 ntBASIC2.6□□□□□ -1.99
CCDC50Q8IVM0 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
CCDC50Q8IVM0 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.6□□□□□ -1.99
CCDC50Q8IVM0 HMGB1P14-201ENST00000557424 591 ntBASIC2.6□□□□□ -1.99
CCDC50Q8IVM0 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.6□□□□□ -1.99
CCDC50Q8IVM0 AC024560.3-201ENST00000608482 349 ntBASIC2.6□□□□□ -1.99
CCDC50Q8IVM0 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.6□□□□□ -1.99
CCDC50Q8IVM0 AC092608.2-201ENST00000624427 218 ntBASIC2.6□□□□□ -1.99
CCDC50Q8IVM0 AL159972.1-201ENST00000625150 448 ntBASIC2.6□□□□□ -1.99
CCDC50Q8IVM0 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC50Q8IVM0 AL138713.1-201ENST00000624026 2130 ntBASIC2.6□□□□□ -1.99
CCDC50Q8IVM0 AC092447.10-201ENST00000620607 1652 ntBASIC2.6□□□□□ -1.99
CCDC50Q8IVM0 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
CCDC50Q8IVM0 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
CCDC50Q8IVM0 RNU6-853P-201ENST00000364306 107 ntBASIC2.59□□□□□ -1.99
CCDC50Q8IVM0 RNU6-7-201ENST00000364784 107 ntBASIC2.59□□□□□ -1.99
CCDC50Q8IVM0 RNU6-8-201ENST00000365467 107 ntBASIC2.59□□□□□ -1.99
CCDC50Q8IVM0 RN7SKP140-201ENST00000411196 284 ntBASIC2.59□□□□□ -1.99
CCDC50Q8IVM0 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.59□□□□□ -1.99
CCDC50Q8IVM0 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.59□□□□□ -1.99
CCDC50Q8IVM0 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CCDC50Q8IVM0 AL590383.1-201ENST00000428602 75 ntBASIC2.59□□□□□ -1.99
CCDC50Q8IVM0 HSFY7P-201ENST00000432672 318 ntBASIC2.59□□□□□ -1.99
CCDC50Q8IVM0 USP9YP24-201ENST00000434374 697 ntBASIC2.59□□□□□ -1.99
CCDC50Q8IVM0 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.59□□□□□ -1.99
CCDC50Q8IVM0 HSFY8P-201ENST00000437934 318 ntBASIC2.59□□□□□ -1.99
CCDC50Q8IVM0 SNRPEP7-201ENST00000438350 220 ntBASIC2.59□□□□□ -1.99
CCDC50Q8IVM0 MTND3P1-201ENST00000441336 220 ntBASIC2.59□□□□□ -1.99
CCDC50Q8IVM0 PIGFP3-201ENST00000441918 722 ntBASIC2.59□□□□□ -1.99
CCDC50Q8IVM0 USP9YP17-201ENST00000444617 696 ntBASIC2.59□□□□□ -1.99
CCDC50Q8IVM0 AC104389.3-201ENST00000445629 235 ntBASIC2.59□□□□□ -1.99
CCDC50Q8IVM0 CBWD4P-201ENST00000445695 655 ntBASIC2.59□□□□□ -1.99
CCDC50Q8IVM0 BMI1P1-201ENST00000445879 941 ntBASIC2.59□□□□□ -1.99
CCDC50Q8IVM0 AP000542.1-201ENST00000448473 371 ntBASIC2.59□□□□□ -1.99
CCDC50Q8IVM0 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC50Q8IVM0 HSFY5P-201ENST00000453726 309 ntBASIC2.59□□□□□ -1.99
CCDC50Q8IVM0 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.59□□□□□ -1.99
CCDC50Q8IVM0 RPL7P18-201ENST00000478965 734 ntBASIC2.59□□□□□ -1.99
CCDC50Q8IVM0 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC50Q8IVM0 MTCYBP43-201ENST00000513621 740 ntBASIC2.59□□□□□ -1.99
CCDC50Q8IVM0 MTATP6P9-201ENST00000515039 680 ntBASIC2.59□□□□□ -1.99
CCDC50Q8IVM0 RNU6-1282P-201ENST00000516735 96 ntBASIC2.59□□□□□ -1.99
CCDC50Q8IVM0 IGLV3-17-201ENST00000519099 244 ntBASIC2.59□□□□□ -1.99
CCDC50Q8IVM0 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.59□□□□□ -1.99
CCDC50Q8IVM0 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC50Q8IVM0 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC50Q8IVM0 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.59□□□□□ -1.99
CCDC50Q8IVM0 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC50Q8IVM0 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC50Q8IVM0 MIR5694-201ENST00000581190 76 ntBASIC2.59□□□□□ -1.99
CCDC50Q8IVM0 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.59□□□□□ -1.99
CCDC50Q8IVM0 MTCO2P2-201ENST00000591258 225 ntBASIC2.59□□□□□ -1.99
CCDC50Q8IVM0 AL158042.1-201ENST00000605338 460 ntBASIC2.59□□□□□ -1.99
CCDC50Q8IVM0 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC50Q8IVM0 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC50Q8IVM0 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms