Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 RNU6-611P-201ENST00000384276 104 ntBASIC5.51□□□□□ -1.53
RNF135Q8IUD6 RNU6-1081P-201ENST00000384537 107 ntBASIC5.51□□□□□ -1.53
RNF135Q8IUD6 MIR105-1-201ENST00000385222 81 ntBASIC5.51□□□□□ -1.53
RNF135Q8IUD6 RNU6-700P-201ENST00000391043 107 ntBASIC5.51□□□□□ -1.53
RNF135Q8IUD6 EI24P1-201ENST00000416584 867 ntBASIC5.51□□□□□ -1.53
RNF135Q8IUD6 AL096701.2-201ENST00000416920 238 ntBASIC5.51□□□□□ -1.53
RNF135Q8IUD6 EIF4EP2-201ENST00000422816 654 ntBASIC5.51□□□□□ -1.53
RNF135Q8IUD6 AL354766.1-201ENST00000423396 542 ntBASIC5.51□□□□□ -1.53
RNF135Q8IUD6 AC004938.1-201ENST00000438468 308 ntBASIC5.51□□□□□ -1.53
RNF135Q8IUD6 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.51□□□□□ -1.53
RNF135Q8IUD6 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.51□□□□□ -1.53
RNF135Q8IUD6 UBE2Q2P9-201ENST00000490086 202 ntBASIC5.51□□□□□ -1.53
RNF135Q8IUD6 AP002770.2-201ENST00000543613 532 ntBASIC5.51□□□□□ -1.53
RNF135Q8IUD6 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.51□□□□□ -1.53
RNF135Q8IUD6 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC5.51□□□□□ -1.53
RNF135Q8IUD6 MIR5096-201ENST00000583713 70 ntBASIC5.51□□□□□ -1.53
RNF135Q8IUD6 MIR4691-201ENST00000583764 85 ntBASIC5.51□□□□□ -1.53
RNF135Q8IUD6 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.51□□□□□ -1.53
RNF135Q8IUD6 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC5.51□□□□□ -1.53
RNF135Q8IUD6 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.51□□□□□ -1.53
RNF135Q8IUD6 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
RNF135Q8IUD6 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNF135Q8IUD6 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.51□□□□□ -1.53
RNF135Q8IUD6 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
RNF135Q8IUD6 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
RNF135Q8IUD6 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RNF135Q8IUD6 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
RNF135Q8IUD6 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.51□□□□□ -1.53
RNF135Q8IUD6 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.51□□□□□ -1.53
RNF135Q8IUD6 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RNF135Q8IUD6 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNF135Q8IUD6 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.5□□□□□ -1.53
RNF135Q8IUD6 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF135Q8IUD6 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.5□□□□□ -1.53
RNF135Q8IUD6 AC100778.3-201ENST00000580060 1750 ntBASIC5.5□□□□□ -1.53
RNF135Q8IUD6 MAPK10-304ENST00000641341 3984 ntBASIC5.5□□□□□ -1.53
RNF135Q8IUD6 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF135Q8IUD6 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
RNF135Q8IUD6 Y_RNA.33-201ENST00000362591 102 ntBASIC5.5□□□□□ -1.53
RNF135Q8IUD6 RNA5SP479-201ENST00000364858 117 ntBASIC5.5□□□□□ -1.53
RNF135Q8IUD6 RNU6-1140P-201ENST00000410517 106 ntBASIC5.5□□□□□ -1.53
RNF135Q8IUD6 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.5□□□□□ -1.53
RNF135Q8IUD6 NDUFB4P8-201ENST00000435351 367 ntBASIC5.5□□□□□ -1.53
RNF135Q8IUD6 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC5.5□□□□□ -1.53
RNF135Q8IUD6 AC073465.2-201ENST00000440938 498 ntBASIC5.5□□□□□ -1.53
RNF135Q8IUD6 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.5□□□□□ -1.53
RNF135Q8IUD6 RNU4-71P-201ENST00000516258 113 ntBASIC5.5□□□□□ -1.53
RNF135Q8IUD6 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.5□□□□□ -1.53
RNF135Q8IUD6 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.5□□□□□ -1.53
RNF135Q8IUD6 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RNF135Q8IUD6 AMZ2P1-203ENST00000565833 850 ntBASIC5.5□□□□□ -1.53
RNF135Q8IUD6 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC5.5□□□□□ -1.53
RNF135Q8IUD6 AL139124.1-201ENST00000609123 421 ntBASIC5.5□□□□□ -1.53
RNF135Q8IUD6 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC5.5□□□□□ -1.53
RNF135Q8IUD6 AP001282.2-201ENST00000616149 309 ntBASIC5.5□□□□□ -1.53
RNF135Q8IUD6 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.5□□□□□ -1.53
RNF135Q8IUD6 SDAD1P1-202ENST00000524156 2051 ntBASIC5.5□□□□□ -1.53
RNF135Q8IUD6 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF135Q8IUD6 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.5□□□□□ -1.53
RNF135Q8IUD6 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF135Q8IUD6 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RNF135Q8IUD6 SDAD1P2-201ENST00000441308 2028 ntBASIC5.5□□□□□ -1.53
RNF135Q8IUD6 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RNF135Q8IUD6 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
RNF135Q8IUD6 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.49□□□□□ -1.53
RNF135Q8IUD6 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.49□□□□□ -1.53
RNF135Q8IUD6 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RNF135Q8IUD6 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
RNF135Q8IUD6 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
RNF135Q8IUD6 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RNF135Q8IUD6 AC009962.1-201ENST00000567327 3813 ntBASIC5.49□□□□□ -1.53
RNF135Q8IUD6 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
RNF135Q8IUD6 AL391684.1-202ENST00000641293 1636 ntBASIC5.49□□□□□ -1.53
RNF135Q8IUD6 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
RNF135Q8IUD6 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.49□□□□□ -1.53
RNF135Q8IUD6 RNU5A-1-201ENST00000362698 116 ntBASIC5.49□□□□□ -1.53
RNF135Q8IUD6 Y_RNA.65-201ENST00000362846 100 ntBASIC5.49□□□□□ -1.53
RNF135Q8IUD6 Y_RNA.183-201ENST00000363882 113 ntBASIC5.49□□□□□ -1.53
RNF135Q8IUD6 RNU6-595P-201ENST00000363944 107 ntBASIC5.49□□□□□ -1.53
RNF135Q8IUD6 MIR521-1-201ENST00000384902 87 ntBASIC5.49□□□□□ -1.53
RNF135Q8IUD6 SNORD58.1-201ENST00000391313 66 ntBASIC5.49□□□□□ -1.53
RNF135Q8IUD6 RPL21P38-201ENST00000418090 167 ntBASIC5.49□□□□□ -1.53
RNF135Q8IUD6 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC5.49□□□□□ -1.53
RNF135Q8IUD6 EIF1P2-201ENST00000428233 350 ntBASIC5.49□□□□□ -1.53
RNF135Q8IUD6 AL159987.2-201ENST00000432754 307 ntBASIC5.49□□□□□ -1.53
RNF135Q8IUD6 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.49□□□□□ -1.53
RNF135Q8IUD6 RPEP5-201ENST00000441137 268 ntBASIC5.49□□□□□ -1.53
RNF135Q8IUD6 RN7SL188P-201ENST00000469842 285 ntBASIC5.49□□□□□ -1.53
RNF135Q8IUD6 AC092754.1-201ENST00000472975 479 ntBASIC5.49□□□□□ -1.53
RNF135Q8IUD6 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.49□□□□□ -1.53
RNF135Q8IUD6 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.49□□□□□ -1.53
RNF135Q8IUD6 AC022968.1-201ENST00000567372 442 ntBASIC5.49□□□□□ -1.53
RNF135Q8IUD6 MIR5696-201ENST00000578474 85 ntBASIC5.49□□□□□ -1.53
RNF135Q8IUD6 AC098826.3-201ENST00000603823 466 ntBASIC5.49□□□□□ -1.53
RNF135Q8IUD6 AC009314.1-201ENST00000603871 304 ntBASIC5.49□□□□□ -1.53
RNF135Q8IUD6 AP000787.2-201ENST00000604432 568 ntBASIC5.49□□□□□ -1.53
RNF135Q8IUD6 AP001029.2-203ENST00000589795 4910 ntBASIC5.49□□□□□ -1.53
RNF135Q8IUD6 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RNF135Q8IUD6 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.49□□□□□ -1.53
RNF135Q8IUD6 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms