Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.21□□□□□ -1.9
LDB1Q86U70 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.21□□□□□ -1.9
LDB1Q86U70 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.21□□□□□ -1.9
LDB1Q86U70 MIR3944-201ENST00000581277 108 ntBASIC3.21□□□□□ -1.9
LDB1Q86U70 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.21□□□□□ -1.9
LDB1Q86U70 RSL24D1P11-201ENST00000591045 491 ntBASIC3.21□□□□□ -1.9
LDB1Q86U70 DUXAP4-201ENST00000603046 613 ntBASIC3.21□□□□□ -1.9
LDB1Q86U70 AC024220.1-201ENST00000603675 484 ntBASIC3.21□□□□□ -1.9
LDB1Q86U70 AL358072.1-201ENST00000604156 575 ntBASIC3.21□□□□□ -1.9
LDB1Q86U70 AL451064.1-201ENST00000607718 471 ntBASIC3.21□□□□□ -1.9
LDB1Q86U70 AC069200.1-201ENST00000609511 323 ntBASIC3.21□□□□□ -1.9
LDB1Q86U70 AC103710.2-201ENST00000609912 942 ntBASIC3.21□□□□□ -1.9
LDB1Q86U70 AC093783.1-201ENST00000612976 329 ntBASIC3.21□□□□□ -1.9
LDB1Q86U70 AC100793.4-201ENST00000613683 429 ntBASIC3.21□□□□□ -1.9
LDB1Q86U70 PLCE1P1-201ENST00000622094 305 ntBASIC3.21□□□□□ -1.9
LDB1Q86U70 AC027309.3-201ENST00000623419 351 ntBASIC3.21□□□□□ -1.9
LDB1Q86U70 FRG1KP-201ENST00000623592 341 ntBASIC3.21□□□□□ -1.9
LDB1Q86U70 PISRT1-201ENST00000626175 531 ntBASIC3.21□□□□□ -1.9
LDB1Q86U70 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.21□□□□□ -1.9
LDB1Q86U70 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
LDB1Q86U70 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
LDB1Q86U70 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.21□□□□□ -1.9
LDB1Q86U70 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LDB1Q86U70 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.2□□□□□ -1.9
LDB1Q86U70 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LDB1Q86U70 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LDB1Q86U70 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LDB1Q86U70 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.2□□□□□ -1.9
LDB1Q86U70 TPTE2P4-201ENST00000258589 1605 ntBASIC3.2□□□□□ -1.9
LDB1Q86U70 SNORA63.1-201ENST00000362493 131 ntBASIC3.2□□□□□ -1.9
LDB1Q86U70 Y_RNA.51-201ENST00000362725 102 ntBASIC3.2□□□□□ -1.9
LDB1Q86U70 RNU6-511P-201ENST00000363496 107 ntBASIC3.2□□□□□ -1.9
LDB1Q86U70 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LDB1Q86U70 MIR591-201ENST00000385290 95 ntBASIC3.2□□□□□ -1.9
LDB1Q86U70 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LDB1Q86U70 AL357075.1-201ENST00000404107 726 ntBASIC3.2□□□□□ -1.9
LDB1Q86U70 RNU6-248P-201ENST00000410720 107 ntBASIC3.2□□□□□ -1.9
LDB1Q86U70 HMGB3P23-201ENST00000414981 585 ntBASIC3.2□□□□□ -1.9
LDB1Q86U70 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.2□□□□□ -1.9
LDB1Q86U70 RPS15AP6-201ENST00000420703 385 ntBASIC3.2□□□□□ -1.9
LDB1Q86U70 MTCO2P34-201ENST00000421994 607 ntBASIC3.2□□□□□ -1.9
LDB1Q86U70 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.2□□□□□ -1.9
LDB1Q86U70 AC091390.3-201ENST00000426478 338 ntBASIC3.2□□□□□ -1.9
LDB1Q86U70 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.2□□□□□ -1.9
LDB1Q86U70 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.2□□□□□ -1.9
LDB1Q86U70 AC009961.2-201ENST00000435771 251 ntBASIC3.2□□□□□ -1.9
LDB1Q86U70 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.2□□□□□ -1.9
LDB1Q86U70 MTCO1P19-201ENST00000443487 500 ntBASIC3.2□□□□□ -1.9
LDB1Q86U70 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.2□□□□□ -1.9
LDB1Q86U70 Z99127.3-201ENST00000448158 395 ntBASIC3.2□□□□□ -1.9
LDB1Q86U70 GAPDHP17-201ENST00000449858 1001 ntBASIC3.2□□□□□ -1.9
LDB1Q86U70 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.2□□□□□ -1.9
LDB1Q86U70 RPL7P49-201ENST00000471402 708 ntBASIC3.2□□□□□ -1.9
LDB1Q86U70 RPS20P22-201ENST00000473700 357 ntBASIC3.2□□□□□ -1.9
LDB1Q86U70 RN7SKP258-201ENST00000517151 304 ntBASIC3.2□□□□□ -1.9
LDB1Q86U70 RPL12P22-201ENST00000519073 490 ntBASIC3.2□□□□□ -1.9
LDB1Q86U70 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.2□□□□□ -1.9
LDB1Q86U70 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.2□□□□□ -1.9
LDB1Q86U70 AC006362.1-201ENST00000567392 174 ntBASIC3.2□□□□□ -1.9
LDB1Q86U70 MIR2682-201ENST00000580305 110 ntBASIC3.2□□□□□ -1.9
LDB1Q86U70 AC040904.1-201ENST00000590850 223 ntBASIC3.2□□□□□ -1.9
LDB1Q86U70 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.2□□□□□ -1.9
LDB1Q86U70 AC090578.1-201ENST00000604955 591 ntBASIC3.2□□□□□ -1.9
LDB1Q86U70 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.2□□□□□ -1.9
LDB1Q86U70 AC010678.1-201ENST00000614118 713 ntBASIC3.2□□□□□ -1.9
LDB1Q86U70 AC004777.1-201ENST00000624317 287 ntBASIC3.2□□□□□ -1.9
LDB1Q86U70 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.2□□□□□ -1.9
LDB1Q86U70 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LDB1Q86U70 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
LDB1Q86U70 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LDB1Q86U70 SRP72P2-201ENST00000344851 1979 ntBASIC3.2□□□□□ -1.9
LDB1Q86U70 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.19□□□□□ -1.9
LDB1Q86U70 AC007785.2-201ENST00000598627 1916 ntBASIC3.19□□□□□ -1.9
LDB1Q86U70 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LDB1Q86U70 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
LDB1Q86U70 RNU5E-1-201ENST00000362477 120 ntBASIC3.19□□□□□ -1.9
LDB1Q86U70 Y_RNA.201-201ENST00000364052 96 ntBASIC3.19□□□□□ -1.9
LDB1Q86U70 RNA5SP72-201ENST00000364442 117 ntBASIC3.19□□□□□ -1.9
LDB1Q86U70 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LDB1Q86U70 RNU6-741P-201ENST00000383889 107 ntBASIC3.19□□□□□ -1.9
LDB1Q86U70 SNORA48.8-201ENST00000391324 134 ntBASIC3.19□□□□□ -1.9
LDB1Q86U70 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.19□□□□□ -1.9
LDB1Q86U70 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.19□□□□□ -1.9
LDB1Q86U70 AC010153.1-201ENST00000432862 727 ntBASIC3.19□□□□□ -1.9
LDB1Q86U70 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.19□□□□□ -1.9
LDB1Q86U70 MTATP6P30-201ENST00000443540 664 ntBASIC3.19□□□□□ -1.9
LDB1Q86U70 Z75741.1-201ENST00000446793 314 ntBASIC3.19□□□□□ -1.9
LDB1Q86U70 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.19□□□□□ -1.9
LDB1Q86U70 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.19□□□□□ -1.9
LDB1Q86U70 AC091153.1-201ENST00000466297 402 ntBASIC3.19□□□□□ -1.9
LDB1Q86U70 RBM43P1-201ENST00000476891 1081 ntBASIC3.19□□□□□ -1.9
LDB1Q86U70 RAP1BP2-201ENST00000478270 544 ntBASIC3.19□□□□□ -1.9
LDB1Q86U70 RPL30P14-201ENST00000482744 348 ntBASIC3.19□□□□□ -1.9
LDB1Q86U70 HSPD1P15-201ENST00000505573 1122 ntBASIC3.19□□□□□ -1.9
LDB1Q86U70 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.19□□□□□ -1.9
LDB1Q86U70 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.19□□□□□ -1.9
LDB1Q86U70 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.19□□□□□ -1.9
LDB1Q86U70 ATP5F1P5-201ENST00000526403 760 ntBASIC3.19□□□□□ -1.9
LDB1Q86U70 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.19□□□□□ -1.9
LDB1Q86U70 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms