Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.38□□□□□ -1.87
NPHP3Q7Z494 CR383656.7-201ENST00000548164 174 ntBASIC3.38□□□□□ -1.87
NPHP3Q7Z494 SETP7-201ENST00000552169 453 ntBASIC3.38□□□□□ -1.87
NPHP3Q7Z494 AC145350.1-201ENST00000567426 208 ntBASIC3.38□□□□□ -1.87
NPHP3Q7Z494 AC009163.5-201ENST00000575421 637 ntBASIC3.38□□□□□ -1.87
NPHP3Q7Z494 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.38□□□□□ -1.87
NPHP3Q7Z494 AC008751.2-201ENST00000597885 980 ntBASIC3.38□□□□□ -1.87
NPHP3Q7Z494 AL022099.1-201ENST00000604551 712 ntBASIC3.38□□□□□ -1.87
NPHP3Q7Z494 AL031176.1-201ENST00000604554 466 ntBASIC3.38□□□□□ -1.87
NPHP3Q7Z494 AC106900.2-201ENST00000604994 317 ntBASIC3.38□□□□□ -1.87
NPHP3Q7Z494 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.38□□□□□ -1.87
NPHP3Q7Z494 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
NPHP3Q7Z494 CR381653.2-201ENST00000624041 768 ntBASIC3.38□□□□□ -1.87
NPHP3Q7Z494 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.38□□□□□ -1.87
NPHP3Q7Z494 OR4G11P-202ENST00000642116 1414 ntBASIC3.38□□□□□ -1.87
NPHP3Q7Z494 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.37□□□□□ -1.87
NPHP3Q7Z494 AL391994.1-201ENST00000254724 282 ntBASIC3.37□□□□□ -1.87
NPHP3Q7Z494 Y_RNA.238-201ENST00000364441 102 ntBASIC3.37□□□□□ -1.87
NPHP3Q7Z494 RNU6-343P-201ENST00000364709 104 ntBASIC3.37□□□□□ -1.87
NPHP3Q7Z494 AL590084.2-201ENST00000401481 382 ntBASIC3.37□□□□□ -1.87
NPHP3Q7Z494 HMGB1P17-201ENST00000403495 628 ntBASIC3.37□□□□□ -1.87
NPHP3Q7Z494 SNORD88.1-201ENST00000408684 91 ntBASIC3.37□□□□□ -1.87
NPHP3Q7Z494 TPMTP2-201ENST00000414372 726 ntBASIC3.37□□□□□ -1.87
NPHP3Q7Z494 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.37□□□□□ -1.87
NPHP3Q7Z494 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.37□□□□□ -1.87
NPHP3Q7Z494 AC098592.1-201ENST00000419352 333 ntBASIC3.37□□□□□ -1.87
NPHP3Q7Z494 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.37□□□□□ -1.87
NPHP3Q7Z494 AC007742.1-201ENST00000425789 329 ntBASIC3.37□□□□□ -1.87
NPHP3Q7Z494 AL390023.1-201ENST00000428836 262 ntBASIC3.37□□□□□ -1.87
NPHP3Q7Z494 AL590233.1-201ENST00000430017 456 ntBASIC3.37□□□□□ -1.87
NPHP3Q7Z494 MTND5P25-201ENST00000430499 799 ntBASIC3.37□□□□□ -1.87
NPHP3Q7Z494 MTCYBP45-201ENST00000435243 565 ntBASIC3.37□□□□□ -1.87
NPHP3Q7Z494 ELOCP26-201ENST00000436067 329 ntBASIC3.37□□□□□ -1.87
NPHP3Q7Z494 AL117351.1-201ENST00000438864 766 ntBASIC3.37□□□□□ -1.87
NPHP3Q7Z494 MTND5P2-201ENST00000442927 1142 ntBASIC3.37□□□□□ -1.87
NPHP3Q7Z494 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.37□□□□□ -1.87
NPHP3Q7Z494 BX322784.1-201ENST00000455793 1077 ntBASIC3.37□□□□□ -1.87
NPHP3Q7Z494 MEMO1P3-201ENST00000459811 302 ntBASIC3.37□□□□□ -1.87
NPHP3Q7Z494 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NPHP3Q7Z494 AC108860.1-201ENST00000484521 383 ntBASIC3.37□□□□□ -1.87
NPHP3Q7Z494 AC104685.1-201ENST00000502445 371 ntBASIC3.37□□□□□ -1.87
NPHP3Q7Z494 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.37□□□□□ -1.87
NPHP3Q7Z494 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.37□□□□□ -1.87
NPHP3Q7Z494 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.37□□□□□ -1.87
NPHP3Q7Z494 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.37□□□□□ -1.87
NPHP3Q7Z494 RNA5SP458-201ENST00000516188 119 ntBASIC3.37□□□□□ -1.87
NPHP3Q7Z494 RNA5SP76-201ENST00000516277 87 ntBASIC3.37□□□□□ -1.87
NPHP3Q7Z494 AC022861.1-201ENST00000522981 663 ntBASIC3.37□□□□□ -1.87
NPHP3Q7Z494 HSPA8P13-201ENST00000523715 472 ntBASIC3.37□□□□□ -1.87
NPHP3Q7Z494 AP001804.3-201ENST00000525146 880 ntBASIC3.37□□□□□ -1.87
NPHP3Q7Z494 AC022690.1-201ENST00000526681 550 ntBASIC3.37□□□□□ -1.87
NPHP3Q7Z494 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NPHP3Q7Z494 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NPHP3Q7Z494 AP000867.2-201ENST00000532468 320 ntBASIC3.37□□□□□ -1.87
NPHP3Q7Z494 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.37□□□□□ -1.87
NPHP3Q7Z494 AL163153.1-201ENST00000554223 283 ntBASIC3.37□□□□□ -1.87
NPHP3Q7Z494 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.37□□□□□ -1.87
NPHP3Q7Z494 AC009977.1-201ENST00000586015 570 ntBASIC3.37□□□□□ -1.87
NPHP3Q7Z494 AC010620.2-201ENST00000600135 313 ntBASIC3.37□□□□□ -1.87
NPHP3Q7Z494 AC021171.1-201ENST00000603137 706 ntBASIC3.37□□□□□ -1.87
NPHP3Q7Z494 AC106791.2-201ENST00000604680 391 ntBASIC3.37□□□□□ -1.87
NPHP3Q7Z494 AC008962.1-201ENST00000605729 304 ntBASIC3.37□□□□□ -1.87
NPHP3Q7Z494 AC068831.7-201ENST00000616954 363 ntBASIC3.37□□□□□ -1.87
NPHP3Q7Z494 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
NPHP3Q7Z494 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NPHP3Q7Z494 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.37□□□□□ -1.87
NPHP3Q7Z494 AC016717.2-201ENST00000609089 5141 ntBASIC3.37□□□□□ -1.87
NPHP3Q7Z494 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
NPHP3Q7Z494 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NPHP3Q7Z494 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.36□□□□□ -1.87
NPHP3Q7Z494 AC091564.4-201ENST00000533934 2194 ntBASIC3.36□□□□□ -1.87
NPHP3Q7Z494 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NPHP3Q7Z494 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NPHP3Q7Z494 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NPHP3Q7Z494 RNU6-777P-201ENST00000364265 104 ntBASIC3.36□□□□□ -1.87
NPHP3Q7Z494 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.36□□□□□ -1.87
NPHP3Q7Z494 CETN4P-201ENST00000432407 469 ntBASIC3.36□□□□□ -1.87
NPHP3Q7Z494 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NPHP3Q7Z494 HIGD1AP11-201ENST00000438361 280 ntBASIC3.36□□□□□ -1.87
NPHP3Q7Z494 HSPE1P28-201ENST00000443139 211 ntBASIC3.36□□□□□ -1.87
NPHP3Q7Z494 MTCYBP3-201ENST00000445588 1137 ntBASIC3.36□□□□□ -1.87
NPHP3Q7Z494 AC104389.3-201ENST00000445629 235 ntBASIC3.36□□□□□ -1.87
NPHP3Q7Z494 RPL23AP35-201ENST00000451906 501 ntBASIC3.36□□□□□ -1.87
NPHP3Q7Z494 OR6C5P-201ENST00000452388 923 ntBASIC3.36□□□□□ -1.87
NPHP3Q7Z494 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.36□□□□□ -1.87
NPHP3Q7Z494 CACYBPP2-201ENST00000453625 678 ntBASIC3.36□□□□□ -1.87
NPHP3Q7Z494 MTCO3P11-201ENST00000455103 774 ntBASIC3.36□□□□□ -1.87
NPHP3Q7Z494 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.36□□□□□ -1.87
NPHP3Q7Z494 ARPC3P2-201ENST00000457786 533 ntBASIC3.36□□□□□ -1.87
NPHP3Q7Z494 RPL9P6-201ENST00000492764 598 ntBASIC3.36□□□□□ -1.87
NPHP3Q7Z494 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.36□□□□□ -1.87
NPHP3Q7Z494 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.36□□□□□ -1.87
NPHP3Q7Z494 LTV1P1-201ENST00000510683 1237 ntBASIC3.36□□□□□ -1.87
NPHP3Q7Z494 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
NPHP3Q7Z494 AP000857.1-201ENST00000532151 543 ntBASIC3.36□□□□□ -1.87
NPHP3Q7Z494 AC021269.2-201ENST00000532318 330 ntBASIC3.36□□□□□ -1.87
NPHP3Q7Z494 AL133271.1-201ENST00000538229 291 ntBASIC3.36□□□□□ -1.87
NPHP3Q7Z494 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.36□□□□□ -1.87
NPHP3Q7Z494 MED28P6-201ENST00000558776 231 ntBASIC3.36□□□□□ -1.87
NPHP3Q7Z494 AC068313.1-201ENST00000604028 1008 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms