Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TMEM88Q6PEY1 CR381572.2-201ENST00000624852 397 ntBASIC3.4□□□□□ -1.87
TMEM88Q6PEY1 U6.98-201ENST00000637157 84 ntBASIC3.4□□□□□ -1.87
TMEM88Q6PEY1 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
TMEM88Q6PEY1 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.87
TMEM88Q6PEY1 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.39□□□□□ -1.87
TMEM88Q6PEY1 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC3.39□□□□□ -1.87
TMEM88Q6PEY1 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
TMEM88Q6PEY1 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TMEM88Q6PEY1 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TMEM88Q6PEY1 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
TMEM88Q6PEY1 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
TMEM88Q6PEY1 Y_RNA.245-201ENST00000364493 95 ntBASIC3.39□□□□□ -1.87
TMEM88Q6PEY1 Y_RNA.373-201ENST00000365600 103 ntBASIC3.39□□□□□ -1.87
TMEM88Q6PEY1 Y_RNA.378-201ENST00000365652 113 ntBASIC3.39□□□□□ -1.87
TMEM88Q6PEY1 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
TMEM88Q6PEY1 RNU6-741P-201ENST00000383889 107 ntBASIC3.39□□□□□ -1.87
TMEM88Q6PEY1 SNORA32.2-201ENST00000384049 122 ntBASIC3.39□□□□□ -1.87
TMEM88Q6PEY1 RNU6-1127P-201ENST00000384580 107 ntBASIC3.39□□□□□ -1.87
TMEM88Q6PEY1 U3.30-201ENST00000391308 210 ntBASIC3.39□□□□□ -1.87
TMEM88Q6PEY1 MIR298-201ENST00000401212 88 ntBASIC3.39□□□□□ -1.87
TMEM88Q6PEY1 AL162578.1-201ENST00000406202 378 ntBASIC3.39□□□□□ -1.87
TMEM88Q6PEY1 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.39□□□□□ -1.87
TMEM88Q6PEY1 RNU2-33P-201ENST00000410344 192 ntBASIC3.39□□□□□ -1.87
TMEM88Q6PEY1 AC080125.1-201ENST00000414888 684 ntBASIC3.39□□□□□ -1.87
TMEM88Q6PEY1 AC007390.1-201ENST00000415722 356 ntBASIC3.39□□□□□ -1.87
TMEM88Q6PEY1 AL645608.4-201ENST00000423619 154 ntBASIC3.39□□□□□ -1.87
TMEM88Q6PEY1 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.39□□□□□ -1.87
TMEM88Q6PEY1 ERLEC1P1-201ENST00000433806 578 ntBASIC3.39□□□□□ -1.87
TMEM88Q6PEY1 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.39□□□□□ -1.87
TMEM88Q6PEY1 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC3.39□□□□□ -1.87
TMEM88Q6PEY1 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.39□□□□□ -1.87
TMEM88Q6PEY1 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.39□□□□□ -1.87
TMEM88Q6PEY1 AC079168.2-201ENST00000453977 416 ntBASIC3.39□□□□□ -1.87
TMEM88Q6PEY1 AC004801.2-202ENST00000463559 283 ntBASIC3.39□□□□□ -1.87
TMEM88Q6PEY1 RPS29P22-201ENST00000472363 168 ntBASIC3.39□□□□□ -1.87
TMEM88Q6PEY1 AC008628.2-201ENST00000502605 298 ntBASIC3.39□□□□□ -1.87
TMEM88Q6PEY1 AC009901.1-201ENST00000506703 541 ntBASIC3.39□□□□□ -1.87
TMEM88Q6PEY1 AC078814.3-201ENST00000553036 491 ntBASIC3.39□□□□□ -1.87
TMEM88Q6PEY1 AC106782.4-201ENST00000568264 210 ntBASIC3.39□□□□□ -1.87
TMEM88Q6PEY1 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC3.39□□□□□ -1.87
TMEM88Q6PEY1 MIR4424-201ENST00000585257 86 ntBASIC3.39□□□□□ -1.87
TMEM88Q6PEY1 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.39□□□□□ -1.87
TMEM88Q6PEY1 AC107294.1-201ENST00000609524 467 ntBASIC3.39□□□□□ -1.87
TMEM88Q6PEY1 AC007497.1-201ENST00000610421 561 ntBASIC3.39□□□□□ -1.87
TMEM88Q6PEY1 AC092794.2-201ENST00000620933 563 ntBASIC3.39□□□□□ -1.87
TMEM88Q6PEY1 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.39□□□□□ -1.87
TMEM88Q6PEY1 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TMEM88Q6PEY1 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
TMEM88Q6PEY1 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TMEM88Q6PEY1 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
TMEM88Q6PEY1 MFSD8-236ENST00000641509 4050 ntBASIC3.39□□□□□ -1.87
TMEM88Q6PEY1 AC007785.2-201ENST00000598627 1916 ntBASIC3.38□□□□□ -1.87
TMEM88Q6PEY1 AF117829.1-206ENST00000621883 3802 ntBASIC3.38□□□□□ -1.87
TMEM88Q6PEY1 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
TMEM88Q6PEY1 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TMEM88Q6PEY1 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
TMEM88Q6PEY1 Y_RNA.70-201ENST00000362886 110 ntBASIC3.38□□□□□ -1.87
TMEM88Q6PEY1 RNU6-715P-201ENST00000365204 103 ntBASIC3.38□□□□□ -1.87
TMEM88Q6PEY1 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TMEM88Q6PEY1 Y_RNA.534-201ENST00000384599 112 ntBASIC3.38□□□□□ -1.87
TMEM88Q6PEY1 MIR514A2-201ENST00000385131 88 ntBASIC3.38□□□□□ -1.87
TMEM88Q6PEY1 MIR514A3-201ENST00000385132 88 ntBASIC3.38□□□□□ -1.87
TMEM88Q6PEY1 SNORD70.1-201ENST00000391007 85 ntBASIC3.38□□□□□ -1.87
TMEM88Q6PEY1 AL590704.1-201ENST00000402856 794 ntBASIC3.38□□□□□ -1.87
TMEM88Q6PEY1 RNA5SP118-201ENST00000410385 109 ntBASIC3.38□□□□□ -1.87
TMEM88Q6PEY1 BX510359.2-201ENST00000417920 305 ntBASIC3.38□□□□□ -1.87
TMEM88Q6PEY1 RPL21P111-201ENST00000418453 477 ntBASIC3.38□□□□□ -1.87
TMEM88Q6PEY1 RPS24P13-201ENST00000442520 397 ntBASIC3.38□□□□□ -1.87
TMEM88Q6PEY1 RPS15AP27-201ENST00000449183 343 ntBASIC3.38□□□□□ -1.87
TMEM88Q6PEY1 CECR9-201ENST00000453421 199 ntBASIC3.38□□□□□ -1.87
TMEM88Q6PEY1 ISCUP1-201ENST00000454451 448 ntBASIC3.38□□□□□ -1.87
TMEM88Q6PEY1 RPS5P7-201ENST00000456664 608 ntBASIC3.38□□□□□ -1.87
TMEM88Q6PEY1 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.38□□□□□ -1.87
TMEM88Q6PEY1 RN7SL738P-201ENST00000470264 297 ntBASIC3.38□□□□□ -1.87
TMEM88Q6PEY1 RPS15AP34-201ENST00000487776 387 ntBASIC3.38□□□□□ -1.87
TMEM88Q6PEY1 IGLV2-34-201ENST00000490007 283 ntBASIC3.38□□□□□ -1.87
TMEM88Q6PEY1 RPL31P61-201ENST00000496160 376 ntBASIC3.38□□□□□ -1.87
TMEM88Q6PEY1 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.38□□□□□ -1.87
TMEM88Q6PEY1 RNU6-143P-201ENST00000516942 93 ntBASIC3.38□□□□□ -1.87
TMEM88Q6PEY1 RNA5SP291-201ENST00000517222 105 ntBASIC3.38□□□□□ -1.87
TMEM88Q6PEY1 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
TMEM88Q6PEY1 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.38□□□□□ -1.87
TMEM88Q6PEY1 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.38□□□□□ -1.87
TMEM88Q6PEY1 AC012417.1-201ENST00000582307 1039 ntBASIC3.38□□□□□ -1.87
TMEM88Q6PEY1 AC022726.1-201ENST00000587475 207 ntBASIC3.38□□□□□ -1.87
TMEM88Q6PEY1 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.38□□□□□ -1.87
TMEM88Q6PEY1 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC3.38□□□□□ -1.87
TMEM88Q6PEY1 AC019193.2-201ENST00000610012 634 ntBASIC3.38□□□□□ -1.87
TMEM88Q6PEY1 MIR6748-201ENST00000610433 71 ntBASIC3.38□□□□□ -1.87
TMEM88Q6PEY1 AL008636.1-201ENST00000625038 1018 ntBASIC3.38□□□□□ -1.87
TMEM88Q6PEY1 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
TMEM88Q6PEY1 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TMEM88Q6PEY1 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
TMEM88Q6PEY1 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.38□□□□□ -1.87
TMEM88Q6PEY1 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TMEM88Q6PEY1 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms