Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
PRPF40BQ6NWY9 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PRPF40BQ6NWY9 Y_RNA.333-201ENST00000365274 102 ntBASIC5.34□□□□□ -1.55
PRPF40BQ6NWY9 RNU6-946P-201ENST00000383878 107 ntBASIC5.34□□□□□ -1.55
PRPF40BQ6NWY9 RNA5SP372-201ENST00000390836 115 ntBASIC5.34□□□□□ -1.55
PRPF40BQ6NWY9 AC097374.1-203ENST00000400783 485 ntBASIC5.34□□□□□ -1.55
PRPF40BQ6NWY9 RNA5SP111-201ENST00000411386 101 ntBASIC5.34□□□□□ -1.55
PRPF40BQ6NWY9 RPS20P14-201ENST00000412545 360 ntBASIC5.34□□□□□ -1.55
PRPF40BQ6NWY9 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC5.34□□□□□ -1.55
PRPF40BQ6NWY9 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC5.34□□□□□ -1.55
PRPF40BQ6NWY9 SKA2P1-201ENST00000425592 390 ntBASIC5.34□□□□□ -1.55
PRPF40BQ6NWY9 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.34□□□□□ -1.55
PRPF40BQ6NWY9 RPL23AP25-201ENST00000430973 463 ntBASIC5.34□□□□□ -1.55
PRPF40BQ6NWY9 SNAP23P1-201ENST00000433229 246 ntBASIC5.34□□□□□ -1.55
PRPF40BQ6NWY9 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PRPF40BQ6NWY9 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.34□□□□□ -1.55
PRPF40BQ6NWY9 HMGB3P21-201ENST00000452483 547 ntBASIC5.34□□□□□ -1.55
PRPF40BQ6NWY9 BTF3P15-201ENST00000455606 336 ntBASIC5.34□□□□□ -1.55
PRPF40BQ6NWY9 AC008526.1-201ENST00000509149 338 ntBASIC5.34□□□□□ -1.55
PRPF40BQ6NWY9 TBCAP3-201ENST00000512475 312 ntBASIC5.34□□□□□ -1.55
PRPF40BQ6NWY9 DYNLL1P4-201ENST00000549314 266 ntBASIC5.34□□□□□ -1.55
PRPF40BQ6NWY9 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC5.34□□□□□ -1.55
PRPF40BQ6NWY9 AC006006.1-201ENST00000603082 144 ntBASIC5.34□□□□□ -1.55
PRPF40BQ6NWY9 AL158032.1-201ENST00000605401 106 ntBASIC5.34□□□□□ -1.55
PRPF40BQ6NWY9 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.34□□□□□ -1.55
PRPF40BQ6NWY9 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
PRPF40BQ6NWY9 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
PRPF40BQ6NWY9 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC5.34□□□□□ -1.55
PRPF40BQ6NWY9 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PRPF40BQ6NWY9 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
PRPF40BQ6NWY9 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.34□□□□□ -1.56
PRPF40BQ6NWY9 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.56
PRPF40BQ6NWY9 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PRPF40BQ6NWY9 MAPK10-320ENST00000641462 6696 ntBASIC5.33□□□□□ -1.56
PRPF40BQ6NWY9 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PRPF40BQ6NWY9 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
PRPF40BQ6NWY9 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
PRPF40BQ6NWY9 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PRPF40BQ6NWY9 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.33□□□□□ -1.56
PRPF40BQ6NWY9 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
PRPF40BQ6NWY9 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
PRPF40BQ6NWY9 RNU6-989P-201ENST00000362756 107 ntBASIC5.33□□□□□ -1.56
PRPF40BQ6NWY9 RNU1-44P-201ENST00000384453 163 ntBASIC5.33□□□□□ -1.56
PRPF40BQ6NWY9 AL360182.1-201ENST00000397433 468 ntBASIC5.33□□□□□ -1.56
PRPF40BQ6NWY9 AL391417.1-201ENST00000404100 426 ntBASIC5.33□□□□□ -1.56
PRPF40BQ6NWY9 AL121834.1-202ENST00000404494 277 ntBASIC5.33□□□□□ -1.56
PRPF40BQ6NWY9 BX682237.1-201ENST00000415016 335 ntBASIC5.33□□□□□ -1.56
PRPF40BQ6NWY9 AC108032.1-201ENST00000416706 207 ntBASIC5.33□□□□□ -1.56
PRPF40BQ6NWY9 GOT2P5-201ENST00000433995 546 ntBASIC5.33□□□□□ -1.56
PRPF40BQ6NWY9 RPL23AP65-201ENST00000475608 468 ntBASIC5.33□□□□□ -1.56
PRPF40BQ6NWY9 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.33□□□□□ -1.56
PRPF40BQ6NWY9 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PRPF40BQ6NWY9 AC021146.3-201ENST00000511911 260 ntBASIC5.33□□□□□ -1.56
PRPF40BQ6NWY9 RNU6-123P-201ENST00000516163 102 ntBASIC5.33□□□□□ -1.56
PRPF40BQ6NWY9 RANP9-201ENST00000519957 271 ntBASIC5.33□□□□□ -1.56
PRPF40BQ6NWY9 AC090151.1-201ENST00000520784 730 ntBASIC5.33□□□□□ -1.56
PRPF40BQ6NWY9 AP003385.6-201ENST00000531603 374 ntBASIC5.33□□□□□ -1.56
PRPF40BQ6NWY9 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC5.33□□□□□ -1.56
PRPF40BQ6NWY9 AC008521.1-201ENST00000587471 187 ntBASIC5.33□□□□□ -1.56
PRPF40BQ6NWY9 TUG1_2.1-201ENST00000614234 87 ntBASIC5.33□□□□□ -1.56
PRPF40BQ6NWY9 AL021997.2-201ENST00000615674 271 ntBASIC5.33□□□□□ -1.56
PRPF40BQ6NWY9 ATP5A1P2-202ENST00000616464 443 ntBASIC5.33□□□□□ -1.56
PRPF40BQ6NWY9 AL355365.1-201ENST00000616480 294 ntBASIC5.33□□□□□ -1.56
PRPF40BQ6NWY9 PISRT1.1-201ENST00000616930 107 ntBASIC5.33□□□□□ -1.56
PRPF40BQ6NWY9 AC110801.1-201ENST00000623590 212 ntBASIC5.33□□□□□ -1.56
PRPF40BQ6NWY9 AL669831.3-213ENST00000636676 183 ntBASIC5.33□□□□□ -1.56
PRPF40BQ6NWY9 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
PRPF40BQ6NWY9 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PRPF40BQ6NWY9 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PRPF40BQ6NWY9 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
PRPF40BQ6NWY9 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.32□□□□□ -1.56
PRPF40BQ6NWY9 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.32□□□□□ -1.56
PRPF40BQ6NWY9 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PRPF40BQ6NWY9 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
PRPF40BQ6NWY9 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
PRPF40BQ6NWY9 Y_RNA.135-201ENST00000363439 95 ntBASIC5.32□□□□□ -1.56
PRPF40BQ6NWY9 Y_RNA.148-201ENST00000363557 117 ntBASIC5.32□□□□□ -1.56
PRPF40BQ6NWY9 RNU6-593P-201ENST00000364716 112 ntBASIC5.32□□□□□ -1.56
PRPF40BQ6NWY9 Y_RNA.401-201ENST00000383965 117 ntBASIC5.32□□□□□ -1.56
PRPF40BQ6NWY9 RNU6-310P-201ENST00000384655 107 ntBASIC5.32□□□□□ -1.56
PRPF40BQ6NWY9 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC5.32□□□□□ -1.56
PRPF40BQ6NWY9 TRAPPC2P8-201ENST00000440676 396 ntBASIC5.32□□□□□ -1.56
PRPF40BQ6NWY9 MTCO3P45-201ENST00000443036 613 ntBASIC5.32□□□□□ -1.56
PRPF40BQ6NWY9 AL133547.1-201ENST00000448546 220 ntBASIC5.32□□□□□ -1.56
PRPF40BQ6NWY9 AL162389.1-201ENST00000449233 177 ntBASIC5.32□□□□□ -1.56
PRPF40BQ6NWY9 DYNLL1P5-201ENST00000467158 270 ntBASIC5.32□□□□□ -1.56
PRPF40BQ6NWY9 RPL35AP15-201ENST00000468042 339 ntBASIC5.32□□□□□ -1.56
PRPF40BQ6NWY9 AC079140.5-201ENST00000507882 310 ntBASIC5.32□□□□□ -1.56
PRPF40BQ6NWY9 HIGD1AP3-201ENST00000515857 278 ntBASIC5.32□□□□□ -1.56
PRPF40BQ6NWY9 RNU6-390P-201ENST00000516259 103 ntBASIC5.32□□□□□ -1.56
PRPF40BQ6NWY9 RNU6-1213P-201ENST00000517075 94 ntBASIC5.32□□□□□ -1.56
PRPF40BQ6NWY9 RNU6-685P-201ENST00000517088 95 ntBASIC5.32□□□□□ -1.56
PRPF40BQ6NWY9 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC5.32□□□□□ -1.56
PRPF40BQ6NWY9 IFITM8P-201ENST00000522529 394 ntBASIC5.32□□□□□ -1.56
PRPF40BQ6NWY9 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC5.32□□□□□ -1.56
PRPF40BQ6NWY9 MIR3944-201ENST00000581277 108 ntBASIC5.32□□□□□ -1.56
PRPF40BQ6NWY9 MIR3668-201ENST00000582138 75 ntBASIC5.32□□□□□ -1.56
PRPF40BQ6NWY9 MIR3941-201ENST00000582572 103 ntBASIC5.32□□□□□ -1.56
PRPF40BQ6NWY9 AC008739.3-201ENST00000603262 127 ntBASIC5.32□□□□□ -1.56
PRPF40BQ6NWY9 AC007938.3-201ENST00000604965 623 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms