Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.03□□□□□ -1.92
PDLIM3Q53GG5 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.03□□□□□ -1.92
PDLIM3Q53GG5 AC010486.1-201ENST00000511793 424 ntBASIC3.03□□□□□ -1.92
PDLIM3Q53GG5 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PDLIM3Q53GG5 RN7SKP298-201ENST00000515950 94 ntBASIC3.03□□□□□ -1.92
PDLIM3Q53GG5 RNA5SP337-201ENST00000517007 109 ntBASIC3.03□□□□□ -1.92
PDLIM3Q53GG5 RNU6-1220P-201ENST00000517126 108 ntBASIC3.03□□□□□ -1.92
PDLIM3Q53GG5 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
PDLIM3Q53GG5 FAM60DP-201ENST00000524174 632 ntBASIC3.03□□□□□ -1.92
PDLIM3Q53GG5 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.03□□□□□ -1.92
PDLIM3Q53GG5 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.03□□□□□ -1.92
PDLIM3Q53GG5 OR4H12P-201ENST00000556269 907 ntBASIC3.03□□□□□ -1.92
PDLIM3Q53GG5 MTCO3P24-201ENST00000572729 782 ntBASIC3.03□□□□□ -1.92
PDLIM3Q53GG5 AC087499.8-201ENST00000578406 226 ntBASIC3.03□□□□□ -1.92
PDLIM3Q53GG5 MIR4738-201ENST00000579134 87 ntBASIC3.03□□□□□ -1.92
PDLIM3Q53GG5 AC073648.5-201ENST00000603502 305 ntBASIC3.03□□□□□ -1.92
PDLIM3Q53GG5 AC091805.2-201ENST00000603848 235 ntBASIC3.03□□□□□ -1.92
PDLIM3Q53GG5 SNORA62.6-201ENST00000606322 83 ntBASIC3.03□□□□□ -1.92
PDLIM3Q53GG5 MIR98-201ENST00000606724 119 ntBASIC3.03□□□□□ -1.92
PDLIM3Q53GG5 AL589743.7-201ENST00000612637 233 ntBASIC3.03□□□□□ -1.92
PDLIM3Q53GG5 AC093838.1-201ENST00000613014 469 ntBASIC3.03□□□□□ -1.92
PDLIM3Q53GG5 AC004696.1-201ENST00000614345 607 ntBASIC3.03□□□□□ -1.92
PDLIM3Q53GG5 MIR8057-201ENST00000620957 69 ntBASIC3.03□□□□□ -1.92
PDLIM3Q53GG5 AC068880.5-201ENST00000624331 290 ntBASIC3.03□□□□□ -1.92
PDLIM3Q53GG5 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.03□□□□□ -1.92
PDLIM3Q53GG5 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PDLIM3Q53GG5 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
PDLIM3Q53GG5 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.02□□□□□ -1.93
PDLIM3Q53GG5 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
PDLIM3Q53GG5 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PDLIM3Q53GG5 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
PDLIM3Q53GG5 AL049781.1-201ENST00000623195 3585 ntBASIC3.02□□□□□ -1.93
PDLIM3Q53GG5 OR5J1P-201ENST00000313544 939 ntBASIC3.02□□□□□ -1.93
PDLIM3Q53GG5 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PDLIM3Q53GG5 MIR493-201ENST00000385254 89 ntBASIC3.02□□□□□ -1.93
PDLIM3Q53GG5 RNA5SP424-201ENST00000390988 115 ntBASIC3.02□□□□□ -1.93
PDLIM3Q53GG5 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PDLIM3Q53GG5 UBE2V1P2-201ENST00000397758 440 ntBASIC3.02□□□□□ -1.93
PDLIM3Q53GG5 UBA52P6-201ENST00000399822 382 ntBASIC3.02□□□□□ -1.93
PDLIM3Q53GG5 AL139095.1-201ENST00000404326 391 ntBASIC3.02□□□□□ -1.93
PDLIM3Q53GG5 SNORA3.3-201ENST00000408712 125 ntBASIC3.02□□□□□ -1.93
PDLIM3Q53GG5 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.02□□□□□ -1.93
PDLIM3Q53GG5 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.02□□□□□ -1.93
PDLIM3Q53GG5 TMEM167AP1-201ENST00000423409 219 ntBASIC3.02□□□□□ -1.93
PDLIM3Q53GG5 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.02□□□□□ -1.93
PDLIM3Q53GG5 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.02□□□□□ -1.93
PDLIM3Q53GG5 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.02□□□□□ -1.93
PDLIM3Q53GG5 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.02□□□□□ -1.93
PDLIM3Q53GG5 AL590664.1-201ENST00000448065 339 ntBASIC3.02□□□□□ -1.93
PDLIM3Q53GG5 AL049714.1-201ENST00000466686 347 ntBASIC3.02□□□□□ -1.93
PDLIM3Q53GG5 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.02□□□□□ -1.93
PDLIM3Q53GG5 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.02□□□□□ -1.93
PDLIM3Q53GG5 AC138853.1-201ENST00000503549 823 ntBASIC3.02□□□□□ -1.93
PDLIM3Q53GG5 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.02□□□□□ -1.93
PDLIM3Q53GG5 AC022880.1-201ENST00000534017 973 ntBASIC3.02□□□□□ -1.93
PDLIM3Q53GG5 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.02□□□□□ -1.93
PDLIM3Q53GG5 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.02□□□□□ -1.93
PDLIM3Q53GG5 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.02□□□□□ -1.93
PDLIM3Q53GG5 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.02□□□□□ -1.93
PDLIM3Q53GG5 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.02□□□□□ -1.93
PDLIM3Q53GG5 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.02□□□□□ -1.93
PDLIM3Q53GG5 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.02□□□□□ -1.93
PDLIM3Q53GG5 AL845331.3-202ENST00000562856 261 ntBASIC3.02□□□□□ -1.93
PDLIM3Q53GG5 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.02□□□□□ -1.93
PDLIM3Q53GG5 MIR3682-201ENST00000581338 84 ntBASIC3.02□□□□□ -1.93
PDLIM3Q53GG5 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.02□□□□□ -1.93
PDLIM3Q53GG5 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.02□□□□□ -1.93
PDLIM3Q53GG5 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.02□□□□□ -1.93
PDLIM3Q53GG5 AC079089.3-201ENST00000603094 673 ntBASIC3.02□□□□□ -1.93
PDLIM3Q53GG5 AP002826.1-201ENST00000608835 315 ntBASIC3.02□□□□□ -1.93
PDLIM3Q53GG5 Z99129.1-201ENST00000612510 255 ntBASIC3.02□□□□□ -1.93
PDLIM3Q53GG5 AL592295.2-201ENST00000612578 206 ntBASIC3.02□□□□□ -1.93
PDLIM3Q53GG5 AC091834.1-201ENST00000614543 472 ntBASIC3.02□□□□□ -1.93
PDLIM3Q53GG5 AC079684.1-201ENST00000621405 437 ntBASIC3.02□□□□□ -1.93
PDLIM3Q53GG5 PISRT1-201ENST00000626175 531 ntBASIC3.02□□□□□ -1.93
PDLIM3Q53GG5 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PDLIM3Q53GG5 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PDLIM3Q53GG5 AC007496.3-201ENST00000624987 3443 ntBASIC3.02□□□□□ -1.93
PDLIM3Q53GG5 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
PDLIM3Q53GG5 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.01□□□□□ -1.93
PDLIM3Q53GG5 RNA5SP50-201ENST00000363731 107 ntBASIC3.01□□□□□ -1.93
PDLIM3Q53GG5 RNA5SP97-201ENST00000365006 84 ntBASIC3.01□□□□□ -1.93
PDLIM3Q53GG5 SNORA20.2-201ENST00000383922 131 ntBASIC3.01□□□□□ -1.93
PDLIM3Q53GG5 RNU6-1042P-201ENST00000384204 107 ntBASIC3.01□□□□□ -1.93
PDLIM3Q53GG5 RPL23AP32-201ENST00000395315 459 ntBASIC3.01□□□□□ -1.93
PDLIM3Q53GG5 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.01□□□□□ -1.93
PDLIM3Q53GG5 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.01□□□□□ -1.93
PDLIM3Q53GG5 AC018630.2-202ENST00000422992 927 ntBASIC3.01□□□□□ -1.93
PDLIM3Q53GG5 RPL7P46-201ENST00000425129 740 ntBASIC3.01□□□□□ -1.93
PDLIM3Q53GG5 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.01□□□□□ -1.93
PDLIM3Q53GG5 AC005094.1-201ENST00000440420 368 ntBASIC3.01□□□□□ -1.93
PDLIM3Q53GG5 MTCO3P45-201ENST00000443036 613 ntBASIC3.01□□□□□ -1.93
PDLIM3Q53GG5 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.01□□□□□ -1.93
PDLIM3Q53GG5 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.01□□□□□ -1.93
PDLIM3Q53GG5 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.01□□□□□ -1.93
PDLIM3Q53GG5 HSPE1P6-201ENST00000479457 291 ntBASIC3.01□□□□□ -1.93
PDLIM3Q53GG5 RPS3AP14-201ENST00000483907 780 ntBASIC3.01□□□□□ -1.93
PDLIM3Q53GG5 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.01□□□□□ -1.93
PDLIM3Q53GG5 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.01□□□□□ -1.93
PDLIM3Q53GG5 PCBP2P3-201ENST00000509726 843 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms