Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 AC009161.2-201ENST00000624626 138 ntBASIC4.07□□□□□ -1.76
SLC44A4Q53GD3 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SLC44A4Q53GD3 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SLC44A4Q53GD3 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.06□□□□□ -1.76
SLC44A4Q53GD3 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SLC44A4Q53GD3 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SLC44A4Q53GD3 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.06□□□□□ -1.76
SLC44A4Q53GD3 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SLC44A4Q53GD3 RNU6-188P-201ENST00000364207 107 ntBASIC4.06□□□□□ -1.76
SLC44A4Q53GD3 Y_RNA.263-201ENST00000364659 114 ntBASIC4.06□□□□□ -1.76
SLC44A4Q53GD3 RNU6-74P-201ENST00000384235 107 ntBASIC4.06□□□□□ -1.76
SLC44A4Q53GD3 MIR183-201ENST00000384958 110 ntBASIC4.06□□□□□ -1.76
SLC44A4Q53GD3 MT-TD-201ENST00000387419 68 ntBASIC4.06□□□□□ -1.76
SLC44A4Q53GD3 AL136372.1-201ENST00000403060 228 ntBASIC4.06□□□□□ -1.76
SLC44A4Q53GD3 SNORA11.2-201ENST00000408318 127 ntBASIC4.06□□□□□ -1.76
SLC44A4Q53GD3 RPS29P4-201ENST00000414733 161 ntBASIC4.06□□□□□ -1.76
SLC44A4Q53GD3 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.06□□□□□ -1.76
SLC44A4Q53GD3 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.06□□□□□ -1.76
SLC44A4Q53GD3 SDCBPP3-201ENST00000419629 891 ntBASIC4.06□□□□□ -1.76
SLC44A4Q53GD3 AL035423.1-201ENST00000420331 213 ntBASIC4.06□□□□□ -1.76
SLC44A4Q53GD3 MTCO1P39-201ENST00000426148 480 ntBASIC4.06□□□□□ -1.76
SLC44A4Q53GD3 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.06□□□□□ -1.76
SLC44A4Q53GD3 RPL7P54-201ENST00000438336 674 ntBASIC4.06□□□□□ -1.76
SLC44A4Q53GD3 RPL23AP89-201ENST00000439324 255 ntBASIC4.06□□□□□ -1.76
SLC44A4Q53GD3 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.06□□□□□ -1.76
SLC44A4Q53GD3 BNIP3P2-201ENST00000441221 577 ntBASIC4.06□□□□□ -1.76
SLC44A4Q53GD3 AC093019.1-201ENST00000443135 252 ntBASIC4.06□□□□□ -1.76
SLC44A4Q53GD3 RPL23AP20-201ENST00000447965 421 ntBASIC4.06□□□□□ -1.76
SLC44A4Q53GD3 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.06□□□□□ -1.76
SLC44A4Q53GD3 RNU6-420P-201ENST00000458780 107 ntBASIC4.06□□□□□ -1.76
SLC44A4Q53GD3 AC010631.1-201ENST00000474150 156 ntBASIC4.06□□□□□ -1.76
SLC44A4Q53GD3 AC078817.1-201ENST00000492623 435 ntBASIC4.06□□□□□ -1.76
SLC44A4Q53GD3 AC026427.2-201ENST00000506228 536 ntBASIC4.06□□□□□ -1.76
SLC44A4Q53GD3 AC017037.1-201ENST00000508460 471 ntBASIC4.06□□□□□ -1.76
SLC44A4Q53GD3 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.06□□□□□ -1.76
SLC44A4Q53GD3 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.06□□□□□ -1.76
SLC44A4Q53GD3 RNU6-410P-201ENST00000517006 107 ntBASIC4.06□□□□□ -1.76
SLC44A4Q53GD3 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.06□□□□□ -1.76
SLC44A4Q53GD3 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.06□□□□□ -1.76
SLC44A4Q53GD3 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.06□□□□□ -1.76
SLC44A4Q53GD3 YPEL5P3-201ENST00000547227 352 ntBASIC4.06□□□□□ -1.76
SLC44A4Q53GD3 AL512310.1-201ENST00000548639 172 ntBASIC4.06□□□□□ -1.76
SLC44A4Q53GD3 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.06□□□□□ -1.76
SLC44A4Q53GD3 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.06□□□□□ -1.76
SLC44A4Q53GD3 AC087499.8-201ENST00000578406 226 ntBASIC4.06□□□□□ -1.76
SLC44A4Q53GD3 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.06□□□□□ -1.76
SLC44A4Q53GD3 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
SLC44A4Q53GD3 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SLC44A4Q53GD3 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
SLC44A4Q53GD3 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.06□□□□□ -1.76
SLC44A4Q53GD3 MAPK10-372ENST00000641954 3413 ntBASIC4.06□□□□□ -1.76
SLC44A4Q53GD3 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SLC44A4Q53GD3 AC004925.1-201ENST00000624256 2706 ntBASIC4.06□□□□□ -1.76
SLC44A4Q53GD3 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.05□□□□□ -1.76
SLC44A4Q53GD3 ZNF680P1-201ENST00000436625 1469 ntBASIC4.05□□□□□ -1.76
SLC44A4Q53GD3 AC009812.4-201ENST00000569134 1805 ntBASIC4.05□□□□□ -1.76
SLC44A4Q53GD3 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SLC44A4Q53GD3 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SLC44A4Q53GD3 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SLC44A4Q53GD3 RNU4-73P-201ENST00000363164 141 ntBASIC4.05□□□□□ -1.76
SLC44A4Q53GD3 Y_RNA.279-201ENST00000364763 95 ntBASIC4.05□□□□□ -1.76
SLC44A4Q53GD3 Y_RNA.367-201ENST00000365544 101 ntBASIC4.05□□□□□ -1.76
SLC44A4Q53GD3 Y_RNA.529-201ENST00000384586 119 ntBASIC4.05□□□□□ -1.76
SLC44A4Q53GD3 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.05□□□□□ -1.76
SLC44A4Q53GD3 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.05□□□□□ -1.76
SLC44A4Q53GD3 GTF2IP20-201ENST00000431663 360 ntBASIC4.05□□□□□ -1.76
SLC44A4Q53GD3 CYCSP43-201ENST00000438233 310 ntBASIC4.05□□□□□ -1.76
SLC44A4Q53GD3 HMGB3P12-201ENST00000438745 556 ntBASIC4.05□□□□□ -1.76
SLC44A4Q53GD3 RPL26P6-201ENST00000440913 438 ntBASIC4.05□□□□□ -1.76
SLC44A4Q53GD3 FDX1P2-201ENST00000450769 375 ntBASIC4.05□□□□□ -1.76
SLC44A4Q53GD3 RPS24P6-201ENST00000452670 400 ntBASIC4.05□□□□□ -1.76
SLC44A4Q53GD3 ANP32BP2-201ENST00000454525 545 ntBASIC4.05□□□□□ -1.76
SLC44A4Q53GD3 HMGB3P30-201ENST00000457863 606 ntBASIC4.05□□□□□ -1.76
SLC44A4Q53GD3 AP000873.1-201ENST00000463987 400 ntBASIC4.05□□□□□ -1.76
SLC44A4Q53GD3 AP000926.1-201ENST00000479573 241 ntBASIC4.05□□□□□ -1.76
SLC44A4Q53GD3 RPL23AP55-201ENST00000498163 452 ntBASIC4.05□□□□□ -1.76
SLC44A4Q53GD3 UBE2CP3-201ENST00000502715 450 ntBASIC4.05□□□□□ -1.76
SLC44A4Q53GD3 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.05□□□□□ -1.76
SLC44A4Q53GD3 AC004062.1-201ENST00000509926 645 ntBASIC4.05□□□□□ -1.76
SLC44A4Q53GD3 AC074250.1-201ENST00000511117 192 ntBASIC4.05□□□□□ -1.76
SLC44A4Q53GD3 RNU7-51P-201ENST00000516560 62 ntBASIC4.05□□□□□ -1.76
SLC44A4Q53GD3 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.05□□□□□ -1.76
SLC44A4Q53GD3 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.05□□□□□ -1.76
SLC44A4Q53GD3 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.05□□□□□ -1.76
SLC44A4Q53GD3 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SLC44A4Q53GD3 AP003072.2-201ENST00000527756 676 ntBASIC4.05□□□□□ -1.76
SLC44A4Q53GD3 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.05□□□□□ -1.76
SLC44A4Q53GD3 RPL21P12-201ENST00000559810 515 ntBASIC4.05□□□□□ -1.76
SLC44A4Q53GD3 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.05□□□□□ -1.76
SLC44A4Q53GD3 AC005951.2-201ENST00000576282 495 ntBASIC4.05□□□□□ -1.76
SLC44A4Q53GD3 SNORD84-203ENST00000584275 78 ntBASIC4.05□□□□□ -1.76
SLC44A4Q53GD3 AL136221.1-201ENST00000621449 509 ntBASIC4.05□□□□□ -1.76
SLC44A4Q53GD3 MTND1P37-201ENST00000636562 264 ntBASIC4.05□□□□□ -1.76
SLC44A4Q53GD3 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
SLC44A4Q53GD3 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.05□□□□□ -1.76
SLC44A4Q53GD3 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.05□□□□□ -1.76
SLC44A4Q53GD3 TAB3P1-202ENST00000452645 1634 ntBASIC4.05□□□□□ -1.76
SLC44A4Q53GD3 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SLC44A4Q53GD3 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SLC44A4Q53GD3 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms