Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.25□□□□□ -1.73
LONRF3Q496Y0 RPL31P58-201ENST00000469001 379 ntBASIC4.25□□□□□ -1.73
LONRF3Q496Y0 PRDX4P1-201ENST00000507189 574 ntBASIC4.25□□□□□ -1.73
LONRF3Q496Y0 RN7SKP209-201ENST00000516888 304 ntBASIC4.25□□□□□ -1.73
LONRF3Q496Y0 SCARNA14-201ENST00000516903 136 ntBASIC4.25□□□□□ -1.73
LONRF3Q496Y0 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.25□□□□□ -1.73
LONRF3Q496Y0 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LONRF3Q496Y0 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.25□□□□□ -1.73
LONRF3Q496Y0 CYCSP30-201ENST00000546447 172 ntBASIC4.25□□□□□ -1.73
LONRF3Q496Y0 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.25□□□□□ -1.73
LONRF3Q496Y0 RPL23AP84-201ENST00000571193 464 ntBASIC4.25□□□□□ -1.73
LONRF3Q496Y0 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.25□□□□□ -1.73
LONRF3Q496Y0 AC006504.3-201ENST00000586818 523 ntBASIC4.25□□□□□ -1.73
LONRF3Q496Y0 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.25□□□□□ -1.73
LONRF3Q496Y0 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.25□□□□□ -1.73
LONRF3Q496Y0 AC244205.2-202ENST00000635781 342 ntBASIC4.25□□□□□ -1.73
LONRF3Q496Y0 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.25□□□□□ -1.73
LONRF3Q496Y0 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LONRF3Q496Y0 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
LONRF3Q496Y0 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
LONRF3Q496Y0 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LONRF3Q496Y0 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
LONRF3Q496Y0 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
LONRF3Q496Y0 RNU6-223P-201ENST00000362830 107 ntBASIC4.24□□□□□ -1.73
LONRF3Q496Y0 RNY4P14-201ENST00000363656 96 ntBASIC4.24□□□□□ -1.73
LONRF3Q496Y0 SNORA20.2-201ENST00000383922 131 ntBASIC4.24□□□□□ -1.73
LONRF3Q496Y0 Y_RNA.402-201ENST00000383972 102 ntBASIC4.24□□□□□ -1.73
LONRF3Q496Y0 RNU6-754P-201ENST00000391166 107 ntBASIC4.24□□□□□ -1.73
LONRF3Q496Y0 RPS15AP12-201ENST00000419498 388 ntBASIC4.24□□□□□ -1.73
LONRF3Q496Y0 AL139247.1-201ENST00000422768 325 ntBASIC4.24□□□□□ -1.73
LONRF3Q496Y0 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.24□□□□□ -1.73
LONRF3Q496Y0 ELOCP14-201ENST00000428070 331 ntBASIC4.24□□□□□ -1.73
LONRF3Q496Y0 NDUFB1P1-201ENST00000435191 180 ntBASIC4.24□□□□□ -1.73
LONRF3Q496Y0 ELOCP7-201ENST00000439968 331 ntBASIC4.24□□□□□ -1.73
LONRF3Q496Y0 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.24□□□□□ -1.73
LONRF3Q496Y0 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC4.24□□□□□ -1.73
LONRF3Q496Y0 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC4.24□□□□□ -1.73
LONRF3Q496Y0 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC4.24□□□□□ -1.73
LONRF3Q496Y0 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC4.24□□□□□ -1.73
LONRF3Q496Y0 AC023194.1-201ENST00000493084 308 ntBASIC4.24□□□□□ -1.73
LONRF3Q496Y0 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LONRF3Q496Y0 MTND4LP22-201ENST00000508209 276 ntBASIC4.24□□□□□ -1.73
LONRF3Q496Y0 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.24□□□□□ -1.73
LONRF3Q496Y0 AL121576.1-201ENST00000556055 276 ntBASIC4.24□□□□□ -1.73
LONRF3Q496Y0 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.24□□□□□ -1.73
LONRF3Q496Y0 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.24□□□□□ -1.73
LONRF3Q496Y0 MIR548S-201ENST00000581352 82 ntBASIC4.24□□□□□ -1.73
LONRF3Q496Y0 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.24□□□□□ -1.73
LONRF3Q496Y0 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.24□□□□□ -1.73
LONRF3Q496Y0 AP000907.4-201ENST00000604143 237 ntBASIC4.24□□□□□ -1.73
LONRF3Q496Y0 AC104458.1-201ENST00000608243 463 ntBASIC4.24□□□□□ -1.73
LONRF3Q496Y0 TUG1_2.1-201ENST00000614234 87 ntBASIC4.24□□□□□ -1.73
LONRF3Q496Y0 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.24□□□□□ -1.73
LONRF3Q496Y0 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.24□□□□□ -1.73
LONRF3Q496Y0 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LONRF3Q496Y0 AC073073.2-201ENST00000609827 2578 ntBASIC4.24□□□□□ -1.73
LONRF3Q496Y0 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LONRF3Q496Y0 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.23□□□□□ -1.73
LONRF3Q496Y0 HSPA8P1-201ENST00000425843 1833 ntBASIC4.23□□□□□ -1.73
LONRF3Q496Y0 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.23□□□□□ -1.73
LONRF3Q496Y0 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.23□□□□□ -1.73
LONRF3Q496Y0 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.23□□□□□ -1.73
LONRF3Q496Y0 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LONRF3Q496Y0 RNU6-1090P-201ENST00000364065 94 ntBASIC4.23□□□□□ -1.73
LONRF3Q496Y0 RNU1-39P-201ENST00000383897 165 ntBASIC4.23□□□□□ -1.73
LONRF3Q496Y0 Y_RNA.390-201ENST00000383932 102 ntBASIC4.23□□□□□ -1.73
LONRF3Q496Y0 RNU6-278P-201ENST00000390945 109 ntBASIC4.23□□□□□ -1.73
LONRF3Q496Y0 TXNP7-201ENST00000406296 293 ntBASIC4.23□□□□□ -1.73
LONRF3Q496Y0 SNORA3.3-201ENST00000408712 125 ntBASIC4.23□□□□□ -1.73
LONRF3Q496Y0 RNA5SP38-201ENST00000410750 119 ntBASIC4.23□□□□□ -1.73
LONRF3Q496Y0 USP9YP6-201ENST00000413550 854 ntBASIC4.23□□□□□ -1.73
LONRF3Q496Y0 BX842559.1-201ENST00000419615 532 ntBASIC4.23□□□□□ -1.73
LONRF3Q496Y0 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.23□□□□□ -1.73
LONRF3Q496Y0 RPL21P40-201ENST00000428586 483 ntBASIC4.23□□□□□ -1.73
LONRF3Q496Y0 YME1L1P1-201ENST00000429435 297 ntBASIC4.23□□□□□ -1.73
LONRF3Q496Y0 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
LONRF3Q496Y0 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC4.23□□□□□ -1.73
LONRF3Q496Y0 NFU1P2-201ENST00000448700 469 ntBASIC4.23□□□□□ -1.73
LONRF3Q496Y0 AL162389.1-201ENST00000449233 177 ntBASIC4.23□□□□□ -1.73
LONRF3Q496Y0 AC140076.1-201ENST00000449897 361 ntBASIC4.23□□□□□ -1.73
LONRF3Q496Y0 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.23□□□□□ -1.73
LONRF3Q496Y0 RPL21P8-201ENST00000465083 535 ntBASIC4.23□□□□□ -1.73
LONRF3Q496Y0 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.23□□□□□ -1.73
LONRF3Q496Y0 RPL32P34-201ENST00000486380 400 ntBASIC4.23□□□□□ -1.73
LONRF3Q496Y0 AC020893.1-201ENST00000502452 580 ntBASIC4.23□□□□□ -1.73
LONRF3Q496Y0 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.23□□□□□ -1.73
LONRF3Q496Y0 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.23□□□□□ -1.73
LONRF3Q496Y0 Y_RNA.704-201ENST00000516851 102 ntBASIC4.23□□□□□ -1.73
LONRF3Q496Y0 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.23□□□□□ -1.73
LONRF3Q496Y0 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC4.23□□□□□ -1.73
LONRF3Q496Y0 AC022616.3-201ENST00000523940 148 ntBASIC4.23□□□□□ -1.73
LONRF3Q496Y0 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.23□□□□□ -1.73
LONRF3Q496Y0 AP000857.1-201ENST00000532151 543 ntBASIC4.23□□□□□ -1.73
LONRF3Q496Y0 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.23□□□□□ -1.73
LONRF3Q496Y0 AL355836.1-201ENST00000555951 870 ntBASIC4.23□□□□□ -1.73
LONRF3Q496Y0 OR4H12P-201ENST00000556269 907 ntBASIC4.23□□□□□ -1.73
LONRF3Q496Y0 SUB1P2-201ENST00000556401 297 ntBASIC4.23□□□□□ -1.73
LONRF3Q496Y0 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.23□□□□□ -1.73
LONRF3Q496Y0 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.23□□□□□ -1.73
LONRF3Q496Y0 MIR3186-201ENST00000577404 85 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 190.9 ms