Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 MIR3609-201ENST00000582661 80 ntBASIC2.39□□□□□ -2.03
RFX4Q33E94 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.39□□□□□ -2.03
RFX4Q33E94 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.39□□□□□ -2.03
RFX4Q33E94 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.39□□□□□ -2.03
RFX4Q33E94 AL391001.1-201ENST00000602747 715 ntBASIC2.39□□□□□ -2.03
RFX4Q33E94 AC013553.2-201ENST00000604244 589 ntBASIC2.39□□□□□ -2.03
RFX4Q33E94 AC140725.3-201ENST00000616193 880 ntBASIC2.39□□□□□ -2.03
RFX4Q33E94 AL607023.1-201ENST00000620045 248 ntBASIC2.39□□□□□ -2.03
RFX4Q33E94 AC068787.1-201ENST00000623908 691 ntBASIC2.39□□□□□ -2.03
RFX4Q33E94 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
RFX4Q33E94 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.39□□□□□ -2.03
RFX4Q33E94 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.38□□□□□ -2.03
RFX4Q33E94 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
RFX4Q33E94 RPL21P132-201ENST00000331267 462 ntBASIC2.38□□□□□ -2.03
RFX4Q33E94 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
RFX4Q33E94 RNU5A-1-201ENST00000362698 116 ntBASIC2.38□□□□□ -2.03
RFX4Q33E94 SET-203ENST00000372688 801 ntTSL 2 BASIC2.38□□□□□ -2.03
RFX4Q33E94 RNU6-723P-201ENST00000383973 107 ntBASIC2.38□□□□□ -2.03
RFX4Q33E94 RNU6-637P-201ENST00000384050 107 ntBASIC2.38□□□□□ -2.03
RFX4Q33E94 MIR491-201ENST00000384877 84 ntBASIC2.38□□□□□ -2.03
RFX4Q33E94 MIR514A1-201ENST00000385133 98 ntBASIC2.38□□□□□ -2.03
RFX4Q33E94 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
RFX4Q33E94 RNU6-1197P-201ENST00000391183 107 ntBASIC2.38□□□□□ -2.03
RFX4Q33E94 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
RFX4Q33E94 SNORA11.1-201ENST00000408133 129 ntBASIC2.38□□□□□ -2.03
RFX4Q33E94 MIR320C1-201ENST00000408566 88 ntBASIC2.38□□□□□ -2.03
RFX4Q33E94 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.38□□□□□ -2.03
RFX4Q33E94 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
RFX4Q33E94 MTCO2P17-201ENST00000424336 677 ntBASIC2.38□□□□□ -2.03
RFX4Q33E94 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.38□□□□□ -2.03
RFX4Q33E94 AC087499.2-201ENST00000432861 149 ntBASIC2.38□□□□□ -2.03
RFX4Q33E94 AC092573.2-201ENST00000434546 243 ntBASIC2.38□□□□□ -2.03
RFX4Q33E94 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.38□□□□□ -2.03
RFX4Q33E94 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.38□□□□□ -2.03
RFX4Q33E94 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.38□□□□□ -2.03
RFX4Q33E94 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
RFX4Q33E94 PAXBP1P1-201ENST00000449315 447 ntBASIC2.38□□□□□ -2.03
RFX4Q33E94 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
RFX4Q33E94 OR6C5P-201ENST00000452388 923 ntBASIC2.38□□□□□ -2.03
RFX4Q33E94 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
RFX4Q33E94 RPL37P25-201ENST00000507308 276 ntBASIC2.38□□□□□ -2.03
RFX4Q33E94 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
RFX4Q33E94 AL359273.1-201ENST00000510918 627 ntBASIC2.38□□□□□ -2.03
RFX4Q33E94 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.38□□□□□ -2.03
RFX4Q33E94 RNA5SP282-201ENST00000516355 108 ntBASIC2.38□□□□□ -2.03
RFX4Q33E94 RNA5SP367-201ENST00000516557 118 ntBASIC2.38□□□□□ -2.03
RFX4Q33E94 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.38□□□□□ -2.03
RFX4Q33E94 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.38□□□□□ -2.03
RFX4Q33E94 AC023538.1-201ENST00000534576 736 ntBASIC2.38□□□□□ -2.03
RFX4Q33E94 MTND1P24-201ENST00000552175 861 ntBASIC2.38□□□□□ -2.03
RFX4Q33E94 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.38□□□□□ -2.03
RFX4Q33E94 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.38□□□□□ -2.03
RFX4Q33E94 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.38□□□□□ -2.03
RFX4Q33E94 AC009097.3-201ENST00000563557 1018 ntBASIC2.38□□□□□ -2.03
RFX4Q33E94 AC008669.1-201ENST00000565823 2178 ntBASIC2.38□□□□□ -2.03
RFX4Q33E94 AC011260.1-201ENST00000578420 472 ntBASIC2.38□□□□□ -2.03
RFX4Q33E94 AL031281.1-201ENST00000604049 488 ntBASIC2.38□□□□□ -2.03
RFX4Q33E94 AC025588.2-201ENST00000604851 466 ntBASIC2.38□□□□□ -2.03
RFX4Q33E94 AC097468.3-201ENST00000607956 456 ntBASIC2.38□□□□□ -2.03
RFX4Q33E94 AC027309.3-201ENST00000623419 351 ntBASIC2.38□□□□□ -2.03
RFX4Q33E94 AC008568.2-201ENST00000623862 2313 ntBASIC2.38□□□□□ -2.03
RFX4Q33E94 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.38□□□□□ -2.03
RFX4Q33E94 AC103706.2-201ENST00000638080 240 ntBASIC2.38□□□□□ -2.03
RFX4Q33E94 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.38□□□□□ -2.03
RFX4Q33E94 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
RFX4Q33E94 OR4G2P-202ENST00000641004 1759 ntBASIC2.38□□□□□ -2.03
RFX4Q33E94 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
RFX4Q33E94 AL391994.1-201ENST00000254724 282 ntBASIC2.37□□□□□ -2.03
RFX4Q33E94 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
RFX4Q33E94 AL162578.1-201ENST00000406202 378 ntBASIC2.37□□□□□ -2.03
RFX4Q33E94 RN7SKP266-201ENST00000410232 287 ntBASIC2.37□□□□□ -2.03
RFX4Q33E94 AL592148.1-201ENST00000413568 445 ntBASIC2.37□□□□□ -2.03
RFX4Q33E94 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.37□□□□□ -2.03
RFX4Q33E94 AC018630.2-202ENST00000422992 927 ntBASIC2.37□□□□□ -2.03
RFX4Q33E94 NDUFB4P7-201ENST00000423198 363 ntBASIC2.37□□□□□ -2.03
RFX4Q33E94 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.37□□□□□ -2.03
RFX4Q33E94 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.37□□□□□ -2.03
RFX4Q33E94 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.37□□□□□ -2.03
RFX4Q33E94 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.37□□□□□ -2.03
RFX4Q33E94 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.37□□□□□ -2.03
RFX4Q33E94 ZNF736P8Y-201ENST00000451913 669 ntBASIC2.37□□□□□ -2.03
RFX4Q33E94 ANKRD26P4-201ENST00000455755 950 ntBASIC2.37□□□□□ -2.03
RFX4Q33E94 AC073901.1-201ENST00000462471 408 ntBASIC2.37□□□□□ -2.03
RFX4Q33E94 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.37□□□□□ -2.03
RFX4Q33E94 AL135752.1-201ENST00000479477 471 ntBASIC2.37□□□□□ -2.03
RFX4Q33E94 LTV1P1-201ENST00000510683 1237 ntBASIC2.37□□□□□ -2.03
RFX4Q33E94 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.37□□□□□ -2.03
RFX4Q33E94 SNORA31.11-201ENST00000516528 139 ntBASIC2.37□□□□□ -2.03
RFX4Q33E94 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2.37□□□□□ -2.03
RFX4Q33E94 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
RFX4Q33E94 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.37□□□□□ -2.03
RFX4Q33E94 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
RFX4Q33E94 AL354943.1-201ENST00000572103 781 ntBASIC2.37□□□□□ -2.03
RFX4Q33E94 AC090616.3-201ENST00000582184 217 ntBASIC2.37□□□□□ -2.03
RFX4Q33E94 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.37□□□□□ -2.03
RFX4Q33E94 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.37□□□□□ -2.03
RFX4Q33E94 VN1R90P-201ENST00000595717 726 ntBASIC2.37□□□□□ -2.03
RFX4Q33E94 BCRP9-201ENST00000605312 388 ntBASIC2.37□□□□□ -2.03
RFX4Q33E94 TUSC7.1-201ENST00000610969 165 ntBASIC2.37□□□□□ -2.03
RFX4Q33E94 AL137847.3-201ENST00000611521 109 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms