Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AC023043.4-201ENST00000612081 449 ntBASIC5.66□□□□□ -1.5
CTC1Q2NKJ3 MIR7703-201ENST00000620784 77 ntBASIC5.66□□□□□ -1.5
CTC1Q2NKJ3 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.66□□□□□ -1.5
CTC1Q2NKJ3 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.66□□□□□ -1.5
CTC1Q2NKJ3 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.66□□□□□ -1.5
CTC1Q2NKJ3 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CTC1Q2NKJ3 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CTC1Q2NKJ3 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CTC1Q2NKJ3 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CTC1Q2NKJ3 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CTC1Q2NKJ3 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CTC1Q2NKJ3 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CTC1Q2NKJ3 MTND5P32-201ENST00000560711 1802 ntBASIC5.65□□□□□ -1.5
CTC1Q2NKJ3 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CTC1Q2NKJ3 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CTC1Q2NKJ3 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
CTC1Q2NKJ3 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.5
CTC1Q2NKJ3 AC126755.2-208ENST00000327792 462 ntBASIC5.65□□□□□ -1.5
CTC1Q2NKJ3 AC138969.1-213ENST00000331436 462 ntBASIC5.65□□□□□ -1.5
CTC1Q2NKJ3 RN7SKP113-201ENST00000363891 295 ntBASIC5.65□□□□□ -1.5
CTC1Q2NKJ3 U8.7-201ENST00000364940 136 ntBASIC5.65□□□□□ -1.5
CTC1Q2NKJ3 Y_RNA.357-201ENST00000365487 109 ntBASIC5.65□□□□□ -1.5
CTC1Q2NKJ3 RNU6-147P-201ENST00000383983 107 ntBASIC5.65□□□□□ -1.5
CTC1Q2NKJ3 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CTC1Q2NKJ3 SNORD78.2-201ENST00000391076 69 ntBASIC5.65□□□□□ -1.5
CTC1Q2NKJ3 RNU2-15P-201ENST00000410692 191 ntBASIC5.65□□□□□ -1.5
CTC1Q2NKJ3 RPL21P90-201ENST00000415692 466 ntBASIC5.65□□□□□ -1.5
CTC1Q2NKJ3 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC5.65□□□□□ -1.5
CTC1Q2NKJ3 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.65□□□□□ -1.5
CTC1Q2NKJ3 OR2AM1P-201ENST00000422137 422 ntBASIC5.65□□□□□ -1.5
CTC1Q2NKJ3 AL160275.3-201ENST00000423876 471 ntBASIC5.65□□□□□ -1.5
CTC1Q2NKJ3 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.65□□□□□ -1.5
CTC1Q2NKJ3 AC007395.1-201ENST00000451333 677 ntBASIC5.65□□□□□ -1.5
CTC1Q2NKJ3 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.65□□□□□ -1.5
CTC1Q2NKJ3 AC091959.1-201ENST00000495857 238 ntBASIC5.65□□□□□ -1.5
CTC1Q2NKJ3 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.65□□□□□ -1.5
CTC1Q2NKJ3 AC137627.1-201ENST00000545761 289 ntBASIC5.65□□□□□ -1.5
CTC1Q2NKJ3 SNORD113-5-201ENST00000607261 78 ntBASIC5.65□□□□□ -1.5
CTC1Q2NKJ3 AC006329.2-201ENST00000611491 394 ntBASIC5.65□□□□□ -1.5
CTC1Q2NKJ3 AL031601.2-202ENST00000622650 282 ntBASIC5.65□□□□□ -1.5
CTC1Q2NKJ3 AC007998.5-201ENST00000622938 237 ntBASIC5.65□□□□□ -1.5
CTC1Q2NKJ3 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC5.65□□□□□ -1.5
CTC1Q2NKJ3 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CTC1Q2NKJ3 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CTC1Q2NKJ3 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
CTC1Q2NKJ3 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CTC1Q2NKJ3 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CTC1Q2NKJ3 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
CTC1Q2NKJ3 SAGE4P-201ENST00000442271 3381 ntBASIC5.64□□□□□ -1.51
CTC1Q2NKJ3 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CTC1Q2NKJ3 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CTC1Q2NKJ3 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
CTC1Q2NKJ3 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
CTC1Q2NKJ3 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CTC1Q2NKJ3 Y_RNA.262-201ENST00000364641 102 ntBASIC5.64□□□□□ -1.51
CTC1Q2NKJ3 SNORD63-201ENST00000384262 68 ntBASIC5.64□□□□□ -1.51
CTC1Q2NKJ3 Y_RNA.571-201ENST00000384753 98 ntBASIC5.64□□□□□ -1.51
CTC1Q2NKJ3 AL357139.1-201ENST00000407792 426 ntBASIC5.64□□□□□ -1.51
CTC1Q2NKJ3 AC099336.2-201ENST00000422457 254 ntBASIC5.64□□□□□ -1.51
CTC1Q2NKJ3 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CTC1Q2NKJ3 AC016712.1-201ENST00000431088 378 ntBASIC5.64□□□□□ -1.51
CTC1Q2NKJ3 NDUFB4P8-201ENST00000435351 367 ntBASIC5.64□□□□□ -1.51
CTC1Q2NKJ3 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC5.64□□□□□ -1.51
CTC1Q2NKJ3 LINC02210-201ENST00000444561 288 ntBASIC5.64□□□□□ -1.51
CTC1Q2NKJ3 GAPDHP27-201ENST00000447427 1020 ntBASIC5.64□□□□□ -1.51
CTC1Q2NKJ3 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.64□□□□□ -1.51
CTC1Q2NKJ3 AC099560.2-201ENST00000457554 255 ntBASIC5.64□□□□□ -1.51
CTC1Q2NKJ3 SNORD2.1-201ENST00000458762 69 ntBASIC5.64□□□□□ -1.51
CTC1Q2NKJ3 RNU4ATAC15P-201ENST00000516415 126 ntBASIC5.64□□□□□ -1.51
CTC1Q2NKJ3 AL590705.4-201ENST00000532209 134 ntBASIC5.64□□□□□ -1.51
CTC1Q2NKJ3 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC5.64□□□□□ -1.51
CTC1Q2NKJ3 AC074050.1-201ENST00000563247 211 ntBASIC5.64□□□□□ -1.51
CTC1Q2NKJ3 AP005403.1-201ENST00000579720 229 ntBASIC5.64□□□□□ -1.51
CTC1Q2NKJ3 MIR4737-201ENST00000583979 81 ntBASIC5.64□□□□□ -1.51
CTC1Q2NKJ3 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC5.64□□□□□ -1.51
CTC1Q2NKJ3 SNHG22-203ENST00000617833 660 ntBASIC5.64□□□□□ -1.51
CTC1Q2NKJ3 AC039056.2-201ENST00000622261 511 ntBASIC5.64□□□□□ -1.51
CTC1Q2NKJ3 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CTC1Q2NKJ3 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CTC1Q2NKJ3 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CTC1Q2NKJ3 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.64□□□□□ -1.51
CTC1Q2NKJ3 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CTC1Q2NKJ3 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CTC1Q2NKJ3 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CTC1Q2NKJ3 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CTC1Q2NKJ3 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.63□□□□□ -1.51
CTC1Q2NKJ3 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
CTC1Q2NKJ3 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
CTC1Q2NKJ3 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
CTC1Q2NKJ3 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CTC1Q2NKJ3 AC104964.3-201ENST00000606115 2860 ntBASIC5.63□□□□□ -1.51
CTC1Q2NKJ3 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CTC1Q2NKJ3 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CTC1Q2NKJ3 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
CTC1Q2NKJ3 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.63□□□□□ -1.51
CTC1Q2NKJ3 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC5.63□□□□□ -1.51
CTC1Q2NKJ3 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.63□□□□□ -1.51
CTC1Q2NKJ3 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CTC1Q2NKJ3 RNU6-1064P-201ENST00000410626 104 ntBASIC5.63□□□□□ -1.51
CTC1Q2NKJ3 Y_RNA.623-201ENST00000411128 95 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms