Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 snoU13.8-201ENST00000458890 104 ntBASIC3.04□□□□□ -1.92
SHROOM1Q2M3G4 AC147055.4-201ENST00000504399 745 ntBASIC3.04□□□□□ -1.92
SHROOM1Q2M3G4 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.04□□□□□ -1.92
SHROOM1Q2M3G4 SEM1P1-201ENST00000506694 209 ntBASIC3.04□□□□□ -1.92
SHROOM1Q2M3G4 AC034244.1-201ENST00000507687 207 ntBASIC3.04□□□□□ -1.92
SHROOM1Q2M3G4 RAC1P5-201ENST00000512182 576 ntBASIC3.04□□□□□ -1.92
SHROOM1Q2M3G4 RNU6-714P-201ENST00000516963 103 ntBASIC3.04□□□□□ -1.92
SHROOM1Q2M3G4 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.04□□□□□ -1.92
SHROOM1Q2M3G4 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC3.04□□□□□ -1.92
SHROOM1Q2M3G4 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.04□□□□□ -1.92
SHROOM1Q2M3G4 AL592221.1-201ENST00000605266 382 ntBASIC3.04□□□□□ -1.92
SHROOM1Q2M3G4 AC112220.3-201ENST00000605502 502 ntBASIC3.04□□□□□ -1.92
SHROOM1Q2M3G4 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.04□□□□□ -1.92
SHROOM1Q2M3G4 AL356596.1-201ENST00000624230 379 ntBASIC3.04□□□□□ -1.92
SHROOM1Q2M3G4 AC110079.1-202ENST00000635213 138 ntBASIC3.04□□□□□ -1.92
SHROOM1Q2M3G4 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
SHROOM1Q2M3G4 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.04□□□□□ -1.92
SHROOM1Q2M3G4 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.04□□□□□ -1.92
SHROOM1Q2M3G4 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.04□□□□□ -1.92
SHROOM1Q2M3G4 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.03□□□□□ -1.92
SHROOM1Q2M3G4 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
SHROOM1Q2M3G4 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SHROOM1Q2M3G4 RNU6-1180P-201ENST00000364935 107 ntBASIC3.03□□□□□ -1.92
SHROOM1Q2M3G4 RNU6-1207P-201ENST00000384343 107 ntBASIC3.03□□□□□ -1.92
SHROOM1Q2M3G4 MIR627-201ENST00000384979 97 ntBASIC3.03□□□□□ -1.92
SHROOM1Q2M3G4 SNORA3.2-201ENST00000408221 125 ntBASIC3.03□□□□□ -1.92
SHROOM1Q2M3G4 HIGD1AP15-201ENST00000416198 280 ntBASIC3.03□□□□□ -1.92
SHROOM1Q2M3G4 RPS24P7-201ENST00000416921 246 ntBASIC3.03□□□□□ -1.92
SHROOM1Q2M3G4 RPL22P18-201ENST00000417197 377 ntBASIC3.03□□□□□ -1.92
SHROOM1Q2M3G4 BEND7P1-201ENST00000422058 457 ntBASIC3.03□□□□□ -1.92
SHROOM1Q2M3G4 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.03□□□□□ -1.92
SHROOM1Q2M3G4 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.03□□□□□ -1.92
SHROOM1Q2M3G4 AC129850.1-201ENST00000436203 508 ntBASIC3.03□□□□□ -1.92
SHROOM1Q2M3G4 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.03□□□□□ -1.92
SHROOM1Q2M3G4 AC010099.1-201ENST00000455434 375 ntBASIC3.03□□□□□ -1.92
SHROOM1Q2M3G4 RNU6-420P-201ENST00000458780 107 ntBASIC3.03□□□□□ -1.92
SHROOM1Q2M3G4 AL049714.1-201ENST00000466686 347 ntBASIC3.03□□□□□ -1.92
SHROOM1Q2M3G4 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.03□□□□□ -1.92
SHROOM1Q2M3G4 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.03□□□□□ -1.92
SHROOM1Q2M3G4 RPPH1-2P-201ENST00000516688 293 ntBASIC3.03□□□□□ -1.92
SHROOM1Q2M3G4 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.03□□□□□ -1.92
SHROOM1Q2M3G4 AP001646.1-201ENST00000527936 915 ntBASIC3.03□□□□□ -1.92
SHROOM1Q2M3G4 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.03□□□□□ -1.92
SHROOM1Q2M3G4 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.03□□□□□ -1.92
SHROOM1Q2M3G4 AC087465.1-201ENST00000560574 245 ntBASIC3.03□□□□□ -1.92
SHROOM1Q2M3G4 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.03□□□□□ -1.92
SHROOM1Q2M3G4 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.03□□□□□ -1.92
SHROOM1Q2M3G4 MIR3605-201ENST00000583214 100 ntBASIC3.03□□□□□ -1.92
SHROOM1Q2M3G4 AL596327.1-201ENST00000603629 213 ntBASIC3.03□□□□□ -1.92
SHROOM1Q2M3G4 AC008277.2-201ENST00000605196 797 ntBASIC3.03□□□□□ -1.92
SHROOM1Q2M3G4 AC013244.3-201ENST00000605614 388 ntBASIC3.03□□□□□ -1.92
SHROOM1Q2M3G4 AL357080.1-201ENST00000617394 239 ntBASIC3.03□□□□□ -1.92
SHROOM1Q2M3G4 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.03□□□□□ -1.92
SHROOM1Q2M3G4 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SHROOM1Q2M3G4 AC022336.2-201ENST00000568966 2538 ntBASIC3.02□□□□□ -1.93
SHROOM1Q2M3G4 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
SHROOM1Q2M3G4 RNU6-1214P-201ENST00000363650 109 ntBASIC3.02□□□□□ -1.93
SHROOM1Q2M3G4 AL356421.1-201ENST00000403255 413 ntBASIC3.02□□□□□ -1.93
SHROOM1Q2M3G4 MIR320C1-201ENST00000408566 88 ntBASIC3.02□□□□□ -1.93
SHROOM1Q2M3G4 RPL19P1-201ENST00000411635 428 ntBASIC3.02□□□□□ -1.93
SHROOM1Q2M3G4 RAP1BP1-201ENST00000412709 553 ntBASIC3.02□□□□□ -1.93
SHROOM1Q2M3G4 USP9YP20-201ENST00000419224 558 ntBASIC3.02□□□□□ -1.93
SHROOM1Q2M3G4 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC3.02□□□□□ -1.93
SHROOM1Q2M3G4 TXNL1P1-201ENST00000429528 554 ntBASIC3.02□□□□□ -1.93
SHROOM1Q2M3G4 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.02□□□□□ -1.93
SHROOM1Q2M3G4 AC024082.2-201ENST00000434771 238 ntBASIC3.02□□□□□ -1.93
SHROOM1Q2M3G4 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.02□□□□□ -1.93
SHROOM1Q2M3G4 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.02□□□□□ -1.93
SHROOM1Q2M3G4 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC3.02□□□□□ -1.93
SHROOM1Q2M3G4 MRPL50P4-201ENST00000446432 475 ntBASIC3.02□□□□□ -1.93
SHROOM1Q2M3G4 AC234775.1-201ENST00000454247 670 ntBASIC3.02□□□□□ -1.93
SHROOM1Q2M3G4 AC103975.1-201ENST00000482506 483 ntBASIC3.02□□□□□ -1.93
SHROOM1Q2M3G4 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.02□□□□□ -1.93
SHROOM1Q2M3G4 AC104685.1-201ENST00000502445 371 ntBASIC3.02□□□□□ -1.93
SHROOM1Q2M3G4 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
SHROOM1Q2M3G4 AC112673.1-201ENST00000513168 575 ntBASIC3.02□□□□□ -1.93
SHROOM1Q2M3G4 EEF1A1P37-201ENST00000522748 715 ntBASIC3.02□□□□□ -1.93
SHROOM1Q2M3G4 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.02□□□□□ -1.93
SHROOM1Q2M3G4 AL354943.1-201ENST00000572103 781 ntBASIC3.02□□□□□ -1.93
SHROOM1Q2M3G4 MTATP6P24-201ENST00000576835 677 ntBASIC3.02□□□□□ -1.93
SHROOM1Q2M3G4 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.02□□□□□ -1.93
SHROOM1Q2M3G4 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.02□□□□□ -1.93
SHROOM1Q2M3G4 AL590808.1-201ENST00000618696 141 ntBASIC3.02□□□□□ -1.93
SHROOM1Q2M3G4 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.02□□□□□ -1.93
SHROOM1Q2M3G4 AC008443.7-201ENST00000622195 246 ntBASIC3.02□□□□□ -1.93
SHROOM1Q2M3G4 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.02□□□□□ -1.93
SHROOM1Q2M3G4 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.02□□□□□ -1.93
SHROOM1Q2M3G4 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.02□□□□□ -1.93
SHROOM1Q2M3G4 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
SHROOM1Q2M3G4 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SHROOM1Q2M3G4 RNU6-97P-201ENST00000363387 104 ntBASIC3.01□□□□□ -1.93
SHROOM1Q2M3G4 RNU6-744P-201ENST00000365557 107 ntBASIC3.01□□□□□ -1.93
SHROOM1Q2M3G4 RNU6-1316P-201ENST00000384242 108 ntBASIC3.01□□□□□ -1.93
SHROOM1Q2M3G4 RSL24D1P4-201ENST00000400938 484 ntBASIC3.01□□□□□ -1.93
SHROOM1Q2M3G4 RNU2-43P-201ENST00000410306 190 ntBASIC3.01□□□□□ -1.93
SHROOM1Q2M3G4 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.01□□□□□ -1.93
SHROOM1Q2M3G4 XKRYP1-201ENST00000423438 492 ntBASIC3.01□□□□□ -1.93
SHROOM1Q2M3G4 XKRYP2-201ENST00000432915 492 ntBASIC3.01□□□□□ -1.93
SHROOM1Q2M3G4 ARPC3P1-201ENST00000437218 533 ntBASIC3.01□□□□□ -1.93
SHROOM1Q2M3G4 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 140.2 ms