Protein–RNA interactions for Protein: Q10570

CPSF1, Cleavage and polyadenylation specificity factor subunit 1, humanhuman

Known RBP Predictions only

Length 1,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1Q10570 AC020658.4-201ENST00000613987 684 ntBASIC1.71□□□□□ -2.14
CPSF1Q10570 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.71□□□□□ -2.14
CPSF1Q10570 CDC27P3-201ENST00000635418 1910 ntBASIC1.7□□□□□ -2.14
CPSF1Q10570 Y_RNA.62-201ENST00000362840 99 ntBASIC1.7□□□□□ -2.14
CPSF1Q10570 RNU6-1080P-201ENST00000383982 107 ntBASIC1.7□□□□□ -2.14
CPSF1Q10570 RPS3AP44-201ENST00000425466 790 ntBASIC1.7□□□□□ -2.14
CPSF1Q10570 VN1R108P-201ENST00000431580 830 ntBASIC1.7□□□□□ -2.14
CPSF1Q10570 CALM1P1-201ENST00000442082 433 ntBASIC1.7□□□□□ -2.14
CPSF1Q10570 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC1.7□□□□□ -2.14
CPSF1Q10570 AC055855.1-201ENST00000489563 579 ntBASIC1.7□□□□□ -2.14
CPSF1Q10570 MTCYBP35-201ENST00000503630 1137 ntBASIC1.7□□□□□ -2.14
CPSF1Q10570 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.7□□□□□ -2.14
CPSF1Q10570 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
CPSF1Q10570 HSBP1P1-201ENST00000555205 166 ntBASIC1.7□□□□□ -2.14
CPSF1Q10570 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC1.7□□□□□ -2.14
CPSF1Q10570 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.7□□□□□ -2.14
CPSF1Q10570 AC008121.3-201ENST00000618726 433 ntBASIC1.7□□□□□ -2.14
CPSF1Q10570 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC1.7□□□□□ -2.14
CPSF1Q10570 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
CPSF1Q10570 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
CPSF1Q10570 SNORD114-27-201ENST00000363766 70 ntBASIC1.69□□□□□ -2.14
CPSF1Q10570 OR1L1-202ENST00000373686 1083 ntBASIC1.69□□□□□ -2.14
CPSF1Q10570 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
CPSF1Q10570 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.69□□□□□ -2.14
CPSF1Q10570 AC078857.1-201ENST00000469870 667 ntBASIC1.69□□□□□ -2.14
CPSF1Q10570 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.69□□□□□ -2.14
CPSF1Q10570 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.69□□□□□ -2.14
CPSF1Q10570 AF131216.2-201ENST00000512316 564 ntBASIC1.69□□□□□ -2.14
CPSF1Q10570 BTF3P12-201ENST00000519620 469 ntBASIC1.69□□□□□ -2.14
CPSF1Q10570 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC1.69□□□□□ -2.14
CPSF1Q10570 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.69□□□□□ -2.14
CPSF1Q10570 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.69□□□□□ -2.14
CPSF1Q10570 AC107954.1-201ENST00000565906 727 ntBASIC1.69□□□□□ -2.14
CPSF1Q10570 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC1.69□□□□□ -2.14
CPSF1Q10570 AC090616.3-201ENST00000582184 217 ntBASIC1.69□□□□□ -2.14
CPSF1Q10570 MIR3199-1-201ENST00000582434 88 ntBASIC1.69□□□□□ -2.14
CPSF1Q10570 MIR548Y-201ENST00000582739 110 ntBASIC1.69□□□□□ -2.14
CPSF1Q10570 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC1.69□□□□□ -2.14
CPSF1Q10570 AL078603.1-201ENST00000603824 313 ntBASIC1.69□□□□□ -2.14
CPSF1Q10570 AC004908.2-201ENST00000609090 574 ntBASIC1.69□□□□□ -2.14
CPSF1Q10570 AL627230.6-201ENST00000611129 280 ntBASIC1.69□□□□□ -2.14
CPSF1Q10570 AC022709.1-201ENST00000615967 87 ntBASIC1.69□□□□□ -2.14
CPSF1Q10570 AC095031.1-201ENST00000623685 672 ntBASIC1.69□□□□□ -2.14
CPSF1Q10570 AC110079.1-202ENST00000635213 138 ntBASIC1.69□□□□□ -2.14
CPSF1Q10570 RNU6-582P-201ENST00000362989 107 ntBASIC1.68□□□□□ -2.14
CPSF1Q10570 SNORA1.3-201ENST00000384676 136 ntBASIC1.68□□□□□ -2.14
CPSF1Q10570 MTCYBP34-201ENST00000439552 670 ntBASIC1.68□□□□□ -2.14
CPSF1Q10570 RPS4XP11-201ENST00000446897 772 ntBASIC1.68□□□□□ -2.14
CPSF1Q10570 AL627224.1-201ENST00000448334 444 ntBASIC1.68□□□□□ -2.14
CPSF1Q10570 AC093801.2-201ENST00000503966 1050 ntBASIC1.68□□□□□ -2.14
CPSF1Q10570 AC111000.5-201ENST00000506559 1178 ntBASIC1.68□□□□□ -2.14
CPSF1Q10570 AC022634.1-201ENST00000520765 532 ntBASIC1.68□□□□□ -2.14
CPSF1Q10570 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.68□□□□□ -2.14
CPSF1Q10570 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.68□□□□□ -2.14
CPSF1Q10570 UBE2L4-201ENST00000587688 464 ntBASIC1.68□□□□□ -2.14
CPSF1Q10570 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.68□□□□□ -2.14
CPSF1Q10570 AC005332.10-201ENST00000612725 619 ntBASIC1.68□□□□□ -2.14
CPSF1Q10570 MIR3199-2-201ENST00000636243 86 ntBASIC1.68□□□□□ -2.14
CPSF1Q10570 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
CPSF1Q10570 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
CPSF1Q10570 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.67□□□□□ -2.14
CPSF1Q10570 RPS4XP3-201ENST00000398541 413 ntBASIC1.67□□□□□ -2.14
CPSF1Q10570 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC1.67□□□□□ -2.14
CPSF1Q10570 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.67□□□□□ -2.14
CPSF1Q10570 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.67□□□□□ -2.14
CPSF1Q10570 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC1.67□□□□□ -2.14
CPSF1Q10570 AC133963.2-201ENST00000513686 578 ntBASIC1.67□□□□□ -2.14
CPSF1Q10570 RNA5SP220-201ENST00000516298 104 ntBASIC1.67□□□□□ -2.14
CPSF1Q10570 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.67□□□□□ -2.14
CPSF1Q10570 AL009028.1-201ENST00000604895 802 ntBASIC1.67□□□□□ -2.14
CPSF1Q10570 AC005296.1-201ENST00000616145 209 ntBASIC1.67□□□□□ -2.14
CPSF1Q10570 AC025016.1-201ENST00000616746 682 ntBASIC1.67□□□□□ -2.14
CPSF1Q10570 LINC00216-201ENST00000623548 1126 ntBASIC1.67□□□□□ -2.14
CPSF1Q10570 RNU6-1-201ENST00000383898 107 ntBASIC1.66□□□□□ -2.14
CPSF1Q10570 RNU6-1293P-201ENST00000384077 107 ntBASIC1.66□□□□□ -2.14
CPSF1Q10570 RNU6-42P-201ENST00000384165 107 ntBASIC1.66□□□□□ -2.14
CPSF1Q10570 RNU6-36P-201ENST00000384172 107 ntBASIC1.66□□□□□ -2.14
CPSF1Q10570 RNU6-4P-201ENST00000384205 107 ntBASIC1.66□□□□□ -2.14
CPSF1Q10570 RNU6-5P-201ENST00000384238 107 ntBASIC1.66□□□□□ -2.14
CPSF1Q10570 RNU6-3P-201ENST00000384314 107 ntBASIC1.66□□□□□ -2.14
CPSF1Q10570 RNU6-2-201ENST00000384627 107 ntBASIC1.66□□□□□ -2.14
CPSF1Q10570 RNU6-9-201ENST00000384776 107 ntBASIC1.66□□□□□ -2.14
CPSF1Q10570 RNU6-33P-201ENST00000384793 107 ntBASIC1.66□□□□□ -2.14
CPSF1Q10570 RNU6-837P-201ENST00000391056 108 ntBASIC1.66□□□□□ -2.14
CPSF1Q10570 AL033519.2-201ENST00000403958 392 ntBASIC1.66□□□□□ -2.14
CPSF1Q10570 MTND5P25-201ENST00000430499 799 ntBASIC1.66□□□□□ -2.14
CPSF1Q10570 UBE2V1P5-201ENST00000440070 405 ntBASIC1.66□□□□□ -2.14
CPSF1Q10570 AL513321.1-201ENST00000441175 761 ntBASIC1.66□□□□□ -2.14
CPSF1Q10570 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.66□□□□□ -2.14
CPSF1Q10570 IGKV2D-36-201ENST00000518643 226 ntBASIC1.66□□□□□ -2.14
CPSF1Q10570 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.66□□□□□ -2.14
CPSF1Q10570 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC1.66□□□□□ -2.14
CPSF1Q10570 AC013553.2-201ENST00000604244 589 ntBASIC1.66□□□□□ -2.14
CPSF1Q10570 RNU6-6P-201ENST00000606623 107 ntBASIC1.66□□□□□ -2.14
CPSF1Q10570 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
CPSF1Q10570 RNU6-156P-201ENST00000621869 107 ntBASIC1.66□□□□□ -2.14
CPSF1Q10570 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
CPSF1Q10570 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
CPSF1Q10570 U8.3-201ENST00000363321 132 ntBASIC1.66□□□□□ -2.14
CPSF1Q10570 Y_RNA.354-201ENST00000365448 111 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms