Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 ZNF92P1Y-201ENST00000415010 1191 ntBASIC1.4□□□□□ -2.19
HIST1H1AQ02539 RPL23AP6-201ENST00000446637 472 ntBASIC1.4□□□□□ -2.19
HIST1H1AQ02539 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.4□□□□□ -2.19
HIST1H1AQ02539 AL121769.1-201ENST00000469473 401 ntBASIC1.4□□□□□ -2.19
HIST1H1AQ02539 RPS29P20-201ENST00000489592 171 ntBASIC1.4□□□□□ -2.19
HIST1H1AQ02539 AC034222.1-201ENST00000494052 532 ntBASIC1.4□□□□□ -2.19
HIST1H1AQ02539 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC1.4□□□□□ -2.19
HIST1H1AQ02539 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC1.4□□□□□ -2.19
HIST1H1AQ02539 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.4□□□□□ -2.19
HIST1H1AQ02539 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC1.4□□□□□ -2.19
HIST1H1AQ02539 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC1.4□□□□□ -2.19
HIST1H1AQ02539 AC068790.3-201ENST00000602988 553 ntBASIC1.4□□□□□ -2.19
HIST1H1AQ02539 AC013553.2-201ENST00000604244 589 ntBASIC1.4□□□□□ -2.19
HIST1H1AQ02539 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.4□□□□□ -2.19
HIST1H1AQ02539 AC092881.1-201ENST00000638218 2733 ntBASIC1.39□□□□□ -2.19
HIST1H1AQ02539 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.39□□□□□ -2.19
HIST1H1AQ02539 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
HIST1H1AQ02539 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
HIST1H1AQ02539 Y_RNA.111-201ENST00000363248 100 ntBASIC1.39□□□□□ -2.19
HIST1H1AQ02539 RN7SKP192-201ENST00000411291 327 ntBASIC1.39□□□□□ -2.19
HIST1H1AQ02539 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.39□□□□□ -2.19
HIST1H1AQ02539 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC1.39□□□□□ -2.19
HIST1H1AQ02539 AL158823.1-201ENST00000418441 478 ntBASIC1.39□□□□□ -2.19
HIST1H1AQ02539 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.39□□□□□ -2.19
HIST1H1AQ02539 AC233981.1-201ENST00000423224 461 ntBASIC1.39□□□□□ -2.19
HIST1H1AQ02539 AC096920.1-201ENST00000423991 241 ntBASIC1.39□□□□□ -2.19
HIST1H1AQ02539 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.39□□□□□ -2.19
HIST1H1AQ02539 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
HIST1H1AQ02539 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC1.39□□□□□ -2.19
HIST1H1AQ02539 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.39□□□□□ -2.19
HIST1H1AQ02539 DDX3P2-201ENST00000446138 111 ntBASIC1.39□□□□□ -2.19
HIST1H1AQ02539 AC055855.1-201ENST00000489563 579 ntBASIC1.39□□□□□ -2.19
HIST1H1AQ02539 LTV1P1-201ENST00000510683 1237 ntBASIC1.39□□□□□ -2.19
HIST1H1AQ02539 HAUS1P3-201ENST00000523909 662 ntBASIC1.39□□□□□ -2.19
HIST1H1AQ02539 OR5AK1P-201ENST00000524837 922 ntBASIC1.39□□□□□ -2.19
HIST1H1AQ02539 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.39□□□□□ -2.19
HIST1H1AQ02539 MIR3618-201ENST00000580330 88 ntBASIC1.39□□□□□ -2.19
HIST1H1AQ02539 HMGN2P15-201ENST00000585707 270 ntBASIC1.39□□□□□ -2.19
HIST1H1AQ02539 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.39□□□□□ -2.19
HIST1H1AQ02539 RPP40P2-201ENST00000603596 712 ntBASIC1.39□□□□□ -2.19
HIST1H1AQ02539 AC068276.1-201ENST00000605793 379 ntBASIC1.39□□□□□ -2.19
HIST1H1AQ02539 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.39□□□□□ -2.19
HIST1H1AQ02539 AC087241.4-201ENST00000612441 480 ntBASIC1.39□□□□□ -2.19
HIST1H1AQ02539 AC109454.4-201ENST00000623411 649 ntBASIC1.39□□□□□ -2.19
HIST1H1AQ02539 ANKRD26P2-201ENST00000445530 1710 ntBASIC1.38□□□□□ -2.19
HIST1H1AQ02539 RNU6-1339P-201ENST00000363574 91 ntBASIC1.38□□□□□ -2.19
HIST1H1AQ02539 SNORA23-201ENST00000365128 182 ntBASIC1.38□□□□□ -2.19
HIST1H1AQ02539 RNA5SP88-201ENST00000365560 109 ntBASIC1.38□□□□□ -2.19
HIST1H1AQ02539 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.38□□□□□ -2.19
HIST1H1AQ02539 RNU6-750P-201ENST00000390946 107 ntBASIC1.38□□□□□ -2.19
HIST1H1AQ02539 RNU2-2P-201ENST00000410396 191 ntBASIC1.38□□□□□ -2.19
HIST1H1AQ02539 RNU6-564P-201ENST00000410983 104 ntBASIC1.38□□□□□ -2.19
HIST1H1AQ02539 AC096649.2-201ENST00000416186 393 ntBASIC1.38□□□□□ -2.19
HIST1H1AQ02539 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.38□□□□□ -2.19
HIST1H1AQ02539 AL353729.1-201ENST00000425044 720 ntBASIC1.38□□□□□ -2.19
HIST1H1AQ02539 AL049734.2-201ENST00000441066 616 ntBASIC1.38□□□□□ -2.19
HIST1H1AQ02539 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.38□□□□□ -2.19
HIST1H1AQ02539 RPL12P25-201ENST00000455592 494 ntBASIC1.38□□□□□ -2.19
HIST1H1AQ02539 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.38□□□□□ -2.19
HIST1H1AQ02539 AC027575.1-201ENST00000481064 460 ntBASIC1.38□□□□□ -2.19
HIST1H1AQ02539 AC138853.1-201ENST00000503549 823 ntBASIC1.38□□□□□ -2.19
HIST1H1AQ02539 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC1.38□□□□□ -2.19
HIST1H1AQ02539 AC008526.1-201ENST00000509149 338 ntBASIC1.38□□□□□ -2.19
HIST1H1AQ02539 AC107393.1-201ENST00000512403 346 ntBASIC1.38□□□□□ -2.19
HIST1H1AQ02539 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.38□□□□□ -2.19
HIST1H1AQ02539 HSPE1P18-201ENST00000517602 280 ntBASIC1.38□□□□□ -2.19
HIST1H1AQ02539 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.38□□□□□ -2.19
HIST1H1AQ02539 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
HIST1H1AQ02539 SETP7-201ENST00000552169 453 ntBASIC1.38□□□□□ -2.19
HIST1H1AQ02539 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC1.38□□□□□ -2.19
HIST1H1AQ02539 AC027104.1-201ENST00000563702 681 ntBASIC1.38□□□□□ -2.19
HIST1H1AQ02539 AL022067.1-201ENST00000602426 454 ntBASIC1.38□□□□□ -2.19
HIST1H1AQ02539 AC008121.1-201ENST00000603244 268 ntBASIC1.38□□□□□ -2.19
HIST1H1AQ02539 U2.15-201ENST00000611544 191 ntBASIC1.38□□□□□ -2.19
HIST1H1AQ02539 U2.16-201ENST00000613119 191 ntBASIC1.38□□□□□ -2.19
HIST1H1AQ02539 U2.12-201ENST00000613778 191 ntBASIC1.38□□□□□ -2.19
HIST1H1AQ02539 U2.20-201ENST00000613956 192 ntBASIC1.38□□□□□ -2.19
HIST1H1AQ02539 U2.9-201ENST00000615427 191 ntBASIC1.38□□□□□ -2.19
HIST1H1AQ02539 U2.11-201ENST00000616345 191 ntBASIC1.38□□□□□ -2.19
HIST1H1AQ02539 U2.2-201ENST00000616535 191 ntBASIC1.38□□□□□ -2.19
HIST1H1AQ02539 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
HIST1H1AQ02539 U2.3-201ENST00000617785 191 ntBASIC1.38□□□□□ -2.19
HIST1H1AQ02539 U2.19-201ENST00000618602 191 ntBASIC1.38□□□□□ -2.19
HIST1H1AQ02539 RNU2-1-201ENST00000618664 191 ntBASIC1.38□□□□□ -2.19
HIST1H1AQ02539 U2.6-201ENST00000619225 191 ntBASIC1.38□□□□□ -2.19
HIST1H1AQ02539 U2.5-201ENST00000619465 191 ntBASIC1.38□□□□□ -2.19
HIST1H1AQ02539 U2.10-201ENST00000620268 191 ntBASIC1.38□□□□□ -2.19
HIST1H1AQ02539 YWHAEP7-203ENST00000622054 312 ntBASIC1.38□□□□□ -2.19
HIST1H1AQ02539 AC098679.5-201ENST00000624394 571 ntBASIC1.38□□□□□ -2.19
HIST1H1AQ02539 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.38□□□□□ -2.19
HIST1H1AQ02539 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.38□□□□□ -2.19
HIST1H1AQ02539 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
HIST1H1AQ02539 MTND5P29-201ENST00000458676 1807 ntBASIC1.38□□□□□ -2.19
HIST1H1AQ02539 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
HIST1H1AQ02539 RNA5SP276-201ENST00000362580 94 ntBASIC1.37□□□□□ -2.19
HIST1H1AQ02539 U8.3-201ENST00000363321 132 ntBASIC1.37□□□□□ -2.19
HIST1H1AQ02539 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.37□□□□□ -2.19
HIST1H1AQ02539 RPL17P50-201ENST00000396131 546 ntBASIC1.37□□□□□ -2.19
HIST1H1AQ02539 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.37□□□□□ -2.19
HIST1H1AQ02539 PAICSP7-201ENST00000419829 962 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms