Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC0.68□□□□□ -2.3
HSPG2P98160 SDCBPP1-201ENST00000440192 890 ntBASIC0.68□□□□□ -2.3
HSPG2P98160 AC125611.2-201ENST00000551907 647 ntBASIC0.68□□□□□ -2.3
HSPG2P98160 AC010735.1-201ENST00000567305 1026 ntBASIC0.68□□□□□ -2.3
HSPG2P98160 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC0.68□□□□□ -2.3
HSPG2P98160 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC0.68□□□□□ -2.3
HSPG2P98160 AC130650.2-201ENST00000618736 2403 ntBASIC0.68□□□□□ -2.3
HSPG2P98160 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.68□□□□□ -2.3
HSPG2P98160 CUL4AP1-201ENST00000514750 1863 ntBASIC0.68□□□□□ -2.3
HSPG2P98160 AC099654.7-201ENST00000635788 2127 ntBASIC0.68□□□□□ -2.3
HSPG2P98160 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC0.68□□□□□ -2.3
HSPG2P98160 AC016769.3-201ENST00000396562 315 ntBASIC0.68□□□□□ -2.3
HSPG2P98160 AP000567.1-201ENST00000406413 156 ntBASIC0.68□□□□□ -2.3
HSPG2P98160 Z86062.1-201ENST00000406773 777 ntBASIC0.68□□□□□ -2.3
HSPG2P98160 RNA5SP127-201ENST00000411051 133 ntBASIC0.68□□□□□ -2.3
HSPG2P98160 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC0.68□□□□□ -2.3
HSPG2P98160 SSXP4-201ENST00000451349 245 ntBASIC0.68□□□□□ -2.3
HSPG2P98160 AC093852.1-201ENST00000503587 266 ntBASIC0.68□□□□□ -2.3
HSPG2P98160 OR5BM1P-201ENST00000512021 366 ntBASIC0.68□□□□□ -2.3
HSPG2P98160 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC0.68□□□□□ -2.3
HSPG2P98160 AC009127.3-201ENST00000570531 403 ntBASIC0.68□□□□□ -2.3
HSPG2P98160 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.68□□□□□ -2.3
HSPG2P98160 AC008962.1-201ENST00000605729 304 ntBASIC0.68□□□□□ -2.3
HSPG2P98160 RNA5SP108-201ENST00000605921 117 ntBASIC0.68□□□□□ -2.3
HSPG2P98160 AL442644.1-201ENST00000454390 3105 ntBASIC0.68□□□□□ -2.3
HSPG2P98160 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
HSPG2P98160 RNU6-222P-201ENST00000362438 107 ntBASIC0.67□□□□□ -2.3
HSPG2P98160 AC234064.1-201ENST00000436312 247 ntBASIC0.67□□□□□ -2.3
HSPG2P98160 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC0.67□□□□□ -2.3
HSPG2P98160 AL031601.2-202ENST00000622650 282 ntBASIC0.67□□□□□ -2.3
HSPG2P98160 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
HSPG2P98160 SNORA67.1-201ENST00000364749 141 ntBASIC0.67□□□□□ -2.3
HSPG2P98160 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
HSPG2P98160 HSPE1P22-201ENST00000456856 327 ntBASIC0.67□□□□□ -2.3
HSPG2P98160 RNU2-44P-201ENST00000516795 194 ntBASIC0.67□□□□□ -2.3
HSPG2P98160 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.67□□□□□ -2.3
HSPG2P98160 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.67□□□□□ -2.3
HSPG2P98160 IMMP1LP2-201ENST00000552954 492 ntBASIC0.67□□□□□ -2.3
HSPG2P98160 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC0.67□□□□□ -2.3
HSPG2P98160 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC0.67□□□□□ -2.3
HSPG2P98160 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC0.67□□□□□ -2.3
HSPG2P98160 MIR6840-201ENST00000611937 71 ntBASIC0.67□□□□□ -2.3
HSPG2P98160 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC0.67□□□□□ -2.3
HSPG2P98160 SNORD114-23-201ENST00000363536 72 ntBASIC0.67□□□□□ -2.3
HSPG2P98160 SNRPEP10-201ENST00000420249 274 ntBASIC0.67□□□□□ -2.3
HSPG2P98160 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC0.67□□□□□ -2.3
HSPG2P98160 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC0.67□□□□□ -2.3
HSPG2P98160 AP000949.1-201ENST00000438328 629 ntBASIC0.67□□□□□ -2.3
HSPG2P98160 RPL30P6-201ENST00000475925 342 ntBASIC0.67□□□□□ -2.3
HSPG2P98160 AC008427.1-201ENST00000503102 655 ntBASIC0.67□□□□□ -2.3
HSPG2P98160 AC103833.1-201ENST00000517442 172 ntBASIC0.67□□□□□ -2.3
HSPG2P98160 ANP32BP3-201ENST00000559213 706 ntBASIC0.67□□□□□ -2.3
HSPG2P98160 MTCO1P40-201ENST00000574371 625 ntBASIC0.67□□□□□ -2.3
HSPG2P98160 MIR8087-201ENST00000612745 78 ntBASIC0.67□□□□□ -2.3
HSPG2P98160 AL390240.1-201ENST00000612950 384 ntBASIC0.67□□□□□ -2.3
HSPG2P98160 AC116618.1-201ENST00000634617 774 ntBASIC0.67□□□□□ -2.3
HSPG2P98160 AC025263.3-201ENST00000622965 1396 ntBASIC0.66□□□□□ -2.3
HSPG2P98160 RNU6-203P-201ENST00000384038 104 ntBASIC0.66□□□□□ -2.3
HSPG2P98160 RNU1-52P-201ENST00000384190 164 ntBASIC0.66□□□□□ -2.3
HSPG2P98160 RNU4ATAC16P-201ENST00000408512 126 ntBASIC0.66□□□□□ -2.3
HSPG2P98160 AC099548.1-201ENST00000421443 426 ntBASIC0.66□□□□□ -2.3
HSPG2P98160 TRAPPC2P9-201ENST00000434556 343 ntBASIC0.66□□□□□ -2.3
HSPG2P98160 RAB9AP5-201ENST00000437794 597 ntBASIC0.66□□□□□ -2.3
HSPG2P98160 RAB9AP2-201ENST00000443911 597 ntBASIC0.66□□□□□ -2.3
HSPG2P98160 CASP3P1-201ENST00000446037 609 ntBASIC0.66□□□□□ -2.3
HSPG2P98160 DPPA3P1-201ENST00000448050 469 ntBASIC0.66□□□□□ -2.3
HSPG2P98160 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC0.66□□□□□ -2.3
HSPG2P98160 HMGN2P13-201ENST00000476476 274 ntBASIC0.66□□□□□ -2.3
HSPG2P98160 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC0.66□□□□□ -2.3
HSPG2P98160 AL356118.1-201ENST00000635272 1078 ntBASIC0.66□□□□□ -2.3
HSPG2P98160 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
HSPG2P98160 RNU6-105P-201ENST00000363909 104 ntBASIC0.66□□□□□ -2.3
HSPG2P98160 USP9YP33-201ENST00000412220 421 ntBASIC0.66□□□□□ -2.3
HSPG2P98160 OR51A5P-201ENST00000415429 942 ntBASIC0.66□□□□□ -2.3
HSPG2P98160 AC096632.1-201ENST00000427395 310 ntBASIC0.66□□□□□ -2.3
HSPG2P98160 AL136380.1-201ENST00000447970 162 ntBASIC0.66□□□□□ -2.3
HSPG2P98160 RPL37P25-201ENST00000507308 276 ntBASIC0.66□□□□□ -2.3
HSPG2P98160 OR6C7P-201ENST00000547875 934 ntBASIC0.66□□□□□ -2.3
HSPG2P98160 AP002907.1-201ENST00000606361 1430 ntBASIC0.66□□□□□ -2.3
HSPG2P98160 MTND4P31-201ENST00000425607 1343 ntBASIC0.66□□□□□ -2.3
HSPG2P98160 RNU4-38P-201ENST00000364472 129 ntBASIC0.66□□□□□ -2.3
HSPG2P98160 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
HSPG2P98160 MIR150-201ENST00000385048 84 ntBASIC0.66□□□□□ -2.3
HSPG2P98160 RNU11-5P-201ENST00000391216 129 ntBASIC0.66□□□□□ -2.3
HSPG2P98160 RNU4-65P-201ENST00000410473 140 ntBASIC0.66□□□□□ -2.3
HSPG2P98160 PRELID3BP11-201ENST00000414230 479 ntBASIC0.66□□□□□ -2.3
HSPG2P98160 AL357134.1-201ENST00000445848 426 ntBASIC0.66□□□□□ -2.3
HSPG2P98160 MRPL42P6-201ENST00000486397 371 ntBASIC0.66□□□□□ -2.3
HSPG2P98160 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC0.66□□□□□ -2.3
HSPG2P98160 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
HSPG2P98160 MIR513A1-201ENST00000385138 129 ntBASIC0.66□□□□□ -2.3
HSPG2P98160 AL512504.1-201ENST00000415494 778 ntBASIC0.66□□□□□ -2.3
HSPG2P98160 MRPS36P1-201ENST00000421291 307 ntBASIC0.66□□□□□ -2.3
HSPG2P98160 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC0.66□□□□□ -2.3
HSPG2P98160 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC0.66□□□□□ -2.3
HSPG2P98160 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC0.66□□□□□ -2.3
HSPG2P98160 KLRA1P-201ENST00000503499 986 ntBASIC0.66□□□□□ -2.3
HSPG2P98160 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC0.66□□□□□ -2.3
HSPG2P98160 RNU11-2P-201ENST00000516898 142 ntBASIC0.66□□□□□ -2.3
HSPG2P98160 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms