Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 MICF-203ENST00000432679 129 ntBASIC1.55□□□□□ -2.16
CCL20P78556 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.55□□□□□ -2.16
CCL20P78556 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.55□□□□□ -2.16
CCL20P78556 AC107083.1-201ENST00000439643 279 ntBASIC1.55□□□□□ -2.16
CCL20P78556 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.55□□□□□ -2.16
CCL20P78556 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CCL20P78556 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC1.55□□□□□ -2.16
CCL20P78556 RPS3P1-201ENST00000456781 192 ntBASIC1.55□□□□□ -2.16
CCL20P78556 RPS20P20-201ENST00000460498 340 ntBASIC1.55□□□□□ -2.16
CCL20P78556 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.55□□□□□ -2.16
CCL20P78556 AC090453.1-201ENST00000495560 436 ntBASIC1.55□□□□□ -2.16
CCL20P78556 AC112518.2-201ENST00000508565 425 ntBASIC1.55□□□□□ -2.16
CCL20P78556 MIR892C-201ENST00000516410 77 ntBASIC1.55□□□□□ -2.16
CCL20P78556 RNU2-44P-201ENST00000516795 194 ntBASIC1.55□□□□□ -2.16
CCL20P78556 HSPA8P13-201ENST00000523715 472 ntBASIC1.55□□□□□ -2.16
CCL20P78556 CYCSP26-201ENST00000534107 320 ntBASIC1.55□□□□□ -2.16
CCL20P78556 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.55□□□□□ -2.16
CCL20P78556 AC125611.1-201ENST00000549563 229 ntBASIC1.55□□□□□ -2.16
CCL20P78556 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.55□□□□□ -2.16
CCL20P78556 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.55□□□□□ -2.16
CCL20P78556 VN1R92P-201ENST00000598511 928 ntBASIC1.55□□□□□ -2.16
CCL20P78556 AC011451.2-201ENST00000604303 598 ntBASIC1.55□□□□□ -2.16
CCL20P78556 AL596245.1-201ENST00000618994 362 ntBASIC1.55□□□□□ -2.16
CCL20P78556 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC1.55□□□□□ -2.16
CCL20P78556 AC010889.1-201ENST00000566193 2666 ntBASIC1.55□□□□□ -2.16
CCL20P78556 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
CCL20P78556 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
CCL20P78556 SNORA71.3-201ENST00000362582 128 ntBASIC1.54□□□□□ -2.16
CCL20P78556 SNORA46.1-201ENST00000391069 153 ntBASIC1.54□□□□□ -2.16
CCL20P78556 AL445529.1-201ENST00000398713 389 ntBASIC1.54□□□□□ -2.16
CCL20P78556 RNA5SP80-201ENST00000410475 111 ntBASIC1.54□□□□□ -2.16
CCL20P78556 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC1.54□□□□□ -2.16
CCL20P78556 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.54□□□□□ -2.16
CCL20P78556 AC002381.1-201ENST00000447049 280 ntBASIC1.54□□□□□ -2.16
CCL20P78556 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC1.54□□□□□ -2.16
CCL20P78556 AL136380.1-201ENST00000447970 162 ntBASIC1.54□□□□□ -2.16
CCL20P78556 MTND2P30-201ENST00000456663 382 ntBASIC1.54□□□□□ -2.16
CCL20P78556 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.54□□□□□ -2.16
CCL20P78556 FAM133DP-201ENST00000464802 691 ntBASIC1.54□□□□□ -2.16
CCL20P78556 RPS20P22-201ENST00000473700 357 ntBASIC1.54□□□□□ -2.16
CCL20P78556 MTAPP1-201ENST00000489154 819 ntBASIC1.54□□□□□ -2.16
CCL20P78556 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.54□□□□□ -2.16
CCL20P78556 AC093677.1-201ENST00000514414 678 ntBASIC1.54□□□□□ -2.16
CCL20P78556 AC023632.1-201ENST00000518463 375 ntBASIC1.54□□□□□ -2.16
CCL20P78556 IGKV3-31-201ENST00000523109 329 ntBASIC1.54□□□□□ -2.16
CCL20P78556 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.54□□□□□ -2.16
CCL20P78556 FAM92A1P1-201ENST00000528023 890 ntBASIC1.54□□□□□ -2.16
CCL20P78556 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
CCL20P78556 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
CCL20P78556 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC1.54□□□□□ -2.16
CCL20P78556 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC1.54□□□□□ -2.16
CCL20P78556 GTF3AP2-201ENST00000557014 266 ntBASIC1.54□□□□□ -2.16
CCL20P78556 AC044913.1-201ENST00000557200 430 ntBASIC1.54□□□□□ -2.16
CCL20P78556 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC1.54□□□□□ -2.16
CCL20P78556 AC136601.2-201ENST00000604356 474 ntBASIC1.54□□□□□ -2.16
CCL20P78556 AC010678.1-201ENST00000614118 713 ntBASIC1.54□□□□□ -2.16
CCL20P78556 AC013476.2-201ENST00000614456 459 ntBASIC1.54□□□□□ -2.16
CCL20P78556 AP001486.3-201ENST00000615334 372 ntBASIC1.54□□□□□ -2.16
CCL20P78556 AL158801.5-201ENST00000623123 465 ntBASIC1.54□□□□□ -2.16
CCL20P78556 MIR4275-201ENST00000636486 87 ntBASIC1.54□□□□□ -2.16
CCL20P78556 MTND1P37-201ENST00000636562 264 ntBASIC1.54□□□□□ -2.16
CCL20P78556 RNU1-148P-201ENST00000384472 162 ntBASIC1.53□□□□□ -2.16
CCL20P78556 MIR506-201ENST00000384998 124 ntBASIC1.53□□□□□ -2.16
CCL20P78556 AL450338.1-201ENST00000407987 512 ntBASIC1.53□□□□□ -2.16
CCL20P78556 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.53□□□□□ -2.16
CCL20P78556 LUZP4P1-201ENST00000415420 344 ntBASIC1.53□□□□□ -2.16
CCL20P78556 AC093106.2-201ENST00000428212 385 ntBASIC1.53□□□□□ -2.16
CCL20P78556 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.53□□□□□ -2.16
CCL20P78556 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.53□□□□□ -2.16
CCL20P78556 AC004383.1-201ENST00000438135 289 ntBASIC1.53□□□□□ -2.16
CCL20P78556 AC092427.1-201ENST00000439177 601 ntBASIC1.53□□□□□ -2.16
CCL20P78556 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC1.53□□□□□ -2.16
CCL20P78556 SDCBPP1-201ENST00000440192 890 ntBASIC1.53□□□□□ -2.16
CCL20P78556 MTCYBP11-201ENST00000447254 1109 ntBASIC1.53□□□□□ -2.16
CCL20P78556 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC1.53□□□□□ -2.16
CCL20P78556 TPRKBP1-201ENST00000456243 481 ntBASIC1.53□□□□□ -2.16
CCL20P78556 SNORA84-201ENST00000459229 133 ntBASIC1.53□□□□□ -2.16
CCL20P78556 AC055731.1-201ENST00000474387 401 ntBASIC1.53□□□□□ -2.16
CCL20P78556 TMEM251P1-201ENST00000503717 318 ntBASIC1.53□□□□□ -2.16
CCL20P78556 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.53□□□□□ -2.16
CCL20P78556 AP001189.2-201ENST00000527320 189 ntBASIC1.53□□□□□ -2.16
CCL20P78556 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.53□□□□□ -2.16
CCL20P78556 AL359212.1-201ENST00000556608 614 ntBASIC1.53□□□□□ -2.16
CCL20P78556 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC1.53□□□□□ -2.16
CCL20P78556 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.53□□□□□ -2.16
CCL20P78556 MIR3122-201ENST00000577243 73 ntBASIC1.53□□□□□ -2.16
CCL20P78556 AC090615.1-201ENST00000577519 154 ntBASIC1.53□□□□□ -2.16
CCL20P78556 AC090330.1-201ENST00000588646 764 ntBASIC1.53□□□□□ -2.16
CCL20P78556 AL020997.2-201ENST00000602607 184 ntBASIC1.53□□□□□ -2.16
CCL20P78556 AC025165.5-201ENST00000602802 578 ntBASIC1.53□□□□□ -2.16
CCL20P78556 AC100814.1-201ENST00000606963 623 ntBASIC1.53□□□□□ -2.16
CCL20P78556 Y_RNA.783-201ENST00000613546 102 ntBASIC1.53□□□□□ -2.16
CCL20P78556 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.53□□□□□ -2.16
CCL20P78556 AL162373.1-201ENST00000620433 407 ntBASIC1.53□□□□□ -2.16
CCL20P78556 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.53□□□□□ -2.16
CCL20P78556 CTSLP2-204ENST00000629029 392 ntBASIC1.53□□□□□ -2.16
CCL20P78556 AC087821.2-201ENST00000637086 450 ntBASIC1.53□□□□□ -2.16
CCL20P78556 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.53□□□□□ -2.16
CCL20P78556 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
CCL20P78556 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms