Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 HMGB1P51-201ENST00000605166 638 ntBASIC1.33□□□□□ -2.2
ABCA4P78363 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
ABCA4P78363 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.33□□□□□ -2.2
ABCA4P78363 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
ABCA4P78363 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
ABCA4P78363 RNU6-60P-201ENST00000364792 103 ntBASIC1.33□□□□□ -2.2
ABCA4P78363 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
ABCA4P78363 RNU6-198P-201ENST00000384258 104 ntBASIC1.33□□□□□ -2.2
ABCA4P78363 MIR17-201ENST00000385012 84 ntBASIC1.33□□□□□ -2.2
ABCA4P78363 SNORA67.6-201ENST00000391093 99 ntBASIC1.33□□□□□ -2.2
ABCA4P78363 AL357078.2-201ENST00000416486 427 ntBASIC1.33□□□□□ -2.2
ABCA4P78363 PGBD4P3-201ENST00000440731 581 ntBASIC1.33□□□□□ -2.2
ABCA4P78363 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.33□□□□□ -2.2
ABCA4P78363 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.33□□□□□ -2.2
ABCA4P78363 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.33□□□□□ -2.2
ABCA4P78363 PRELID3BP4-201ENST00000515476 571 ntBASIC1.33□□□□□ -2.2
ABCA4P78363 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.33□□□□□ -2.2
ABCA4P78363 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.33□□□□□ -2.2
ABCA4P78363 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.33□□□□□ -2.2
ABCA4P78363 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.33□□□□□ -2.2
ABCA4P78363 AC136443.5-201ENST00000603741 370 ntBASIC1.33□□□□□ -2.2
ABCA4P78363 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC1.33□□□□□ -2.2
ABCA4P78363 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
ABCA4P78363 RNU6-1072P-201ENST00000384703 107 ntBASIC1.32□□□□□ -2.2
ABCA4P78363 RNU6-443P-201ENST00000384780 107 ntBASIC1.32□□□□□ -2.2
ABCA4P78363 MTND1P23-201ENST00000416931 372 ntBASIC1.32□□□□□ -2.2
ABCA4P78363 AL354695.1-201ENST00000427935 228 ntBASIC1.32□□□□□ -2.2
ABCA4P78363 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.32□□□□□ -2.2
ABCA4P78363 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC1.32□□□□□ -2.2
ABCA4P78363 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.32□□□□□ -2.2
ABCA4P78363 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.32□□□□□ -2.2
ABCA4P78363 COX6CP14-201ENST00000469580 174 ntBASIC1.32□□□□□ -2.2
ABCA4P78363 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC1.32□□□□□ -2.2
ABCA4P78363 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.32□□□□□ -2.2
ABCA4P78363 AL049838.1-201ENST00000563647 981 ntBASIC1.32□□□□□ -2.2
ABCA4P78363 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.32□□□□□ -2.2
ABCA4P78363 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.32□□□□□ -2.2
ABCA4P78363 AC006329.2-201ENST00000611491 394 ntBASIC1.32□□□□□ -2.2
ABCA4P78363 AC012640.5-201ENST00000623897 319 ntBASIC1.32□□□□□ -2.2
ABCA4P78363 AC098679.5-201ENST00000624394 571 ntBASIC1.32□□□□□ -2.2
ABCA4P78363 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.32□□□□□ -2.2
ABCA4P78363 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
ABCA4P78363 RNA5SP258-201ENST00000362750 119 ntBASIC1.32□□□□□ -2.2
ABCA4P78363 RNU6-53P-201ENST00000365367 106 ntBASIC1.32□□□□□ -2.2
ABCA4P78363 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.32□□□□□ -2.2
ABCA4P78363 PAICSP7-201ENST00000419829 962 ntBASIC1.32□□□□□ -2.2
ABCA4P78363 COX6CP12-201ENST00000446748 202 ntBASIC1.32□□□□□ -2.2
ABCA4P78363 AL031659.1-201ENST00000447075 539 ntBASIC1.32□□□□□ -2.2
ABCA4P78363 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.32□□□□□ -2.2
ABCA4P78363 RPS15AP17-201ENST00000470598 390 ntBASIC1.32□□□□□ -2.2
ABCA4P78363 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
ABCA4P78363 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC1.32□□□□□ -2.2
ABCA4P78363 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC1.32□□□□□ -2.2
ABCA4P78363 MRPS36P2-201ENST00000512569 299 ntBASIC1.32□□□□□ -2.2
ABCA4P78363 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC1.32□□□□□ -2.2
ABCA4P78363 AC007115.1-201ENST00000546853 234 ntBASIC1.32□□□□□ -2.2
ABCA4P78363 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC1.32□□□□□ -2.2
ABCA4P78363 MIR4504-201ENST00000577413 92 ntBASIC1.32□□□□□ -2.2
ABCA4P78363 MIR4658-201ENST00000584344 65 ntBASIC1.32□□□□□ -2.2
ABCA4P78363 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.32□□□□□ -2.2
ABCA4P78363 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.32□□□□□ -2.2
ABCA4P78363 AC106900.2-201ENST00000604994 317 ntBASIC1.32□□□□□ -2.2
ABCA4P78363 AC011374.2-201ENST00000607135 526 ntBASIC1.32□□□□□ -2.2
ABCA4P78363 AC005332.10-201ENST00000612725 619 ntBASIC1.32□□□□□ -2.2
ABCA4P78363 AL513185.3-201ENST00000433335 1300 ntBASIC1.32□□□□□ -2.2
ABCA4P78363 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC1.31□□□□□ -2.2
ABCA4P78363 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.31□□□□□ -2.2
ABCA4P78363 EZH2P1-201ENST00000431167 291 ntBASIC1.31□□□□□ -2.2
ABCA4P78363 BX248409.1-201ENST00000455497 255 ntBASIC1.31□□□□□ -2.2
ABCA4P78363 RN7SL274P-201ENST00000492268 272 ntBASIC1.31□□□□□ -2.2
ABCA4P78363 LY96-202ENST00000518893 430 ntTSL 3 BASIC1.31□□□□□ -2.2
ABCA4P78363 AC025857.1-201ENST00000525252 377 ntBASIC1.31□□□□□ -2.2
ABCA4P78363 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.31□□□□□ -2.2
ABCA4P78363 EIF4EP5-201ENST00000528228 640 ntBASIC1.31□□□□□ -2.2
ABCA4P78363 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.31□□□□□ -2.2
ABCA4P78363 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.31□□□□□ -2.2
ABCA4P78363 MIR3609-201ENST00000582661 80 ntBASIC1.31□□□□□ -2.2
ABCA4P78363 HSPE1P7-201ENST00000604681 321 ntBASIC1.31□□□□□ -2.2
ABCA4P78363 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.31□□□□□ -2.2
ABCA4P78363 AC025048.6-202ENST00000627667 438 ntBASIC1.31□□□□□ -2.2
ABCA4P78363 MIR6767-201ENST00000637302 66 ntBASIC1.31□□□□□ -2.2
ABCA4P78363 AC114973.1-201ENST00000429057 632 ntBASIC1.31□□□□□ -2.2
ABCA4P78363 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC1.31□□□□□ -2.2
ABCA4P78363 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC1.31□□□□□ -2.2
ABCA4P78363 snoU13.28-201ENST00000459235 104 ntBASIC1.31□□□□□ -2.2
ABCA4P78363 RPS15AP34-201ENST00000487776 387 ntBASIC1.31□□□□□ -2.2
ABCA4P78363 LTV1P1-201ENST00000510683 1237 ntBASIC1.31□□□□□ -2.2
ABCA4P78363 RNU5F-8P-201ENST00000515941 111 ntBASIC1.31□□□□□ -2.2
ABCA4P78363 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.31□□□□□ -2.2
ABCA4P78363 AP006248.3-201ENST00000623580 594 ntBASIC1.31□□□□□ -2.2
ABCA4P78363 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
ABCA4P78363 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
ABCA4P78363 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
ABCA4P78363 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
ABCA4P78363 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
ABCA4P78363 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
ABCA4P78363 SNORA16.1-201ENST00000364597 132 ntBASIC1.3□□□□□ -2.2
ABCA4P78363 RNU6-1074P-201ENST00000383995 104 ntBASIC1.3□□□□□ -2.2
ABCA4P78363 RNU4-52P-201ENST00000384209 138 ntBASIC1.3□□□□□ -2.2
ABCA4P78363 MIR598-201ENST00000384868 97 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms