Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 RNU4-66P-201ENST00000365199 138 ntBASIC3.14□□□□□ -1.91
ERVFC1-1P60608 RNU5E-6P-201ENST00000365574 115 ntBASIC3.14□□□□□ -1.91
ERVFC1-1P60608 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
ERVFC1-1P60608 Y_RNA.493-201ENST00000384422 102 ntBASIC3.14□□□□□ -1.91
ERVFC1-1P60608 SNORA70E-201ENST00000384492 135 ntBASIC3.14□□□□□ -1.91
ERVFC1-1P60608 RNU6-692P-201ENST00000384496 107 ntBASIC3.14□□□□□ -1.91
ERVFC1-1P60608 RNU11-4P-201ENST00000391149 133 ntBASIC3.14□□□□□ -1.91
ERVFC1-1P60608 AL583835.1-201ENST00000399570 407 ntBASIC3.14□□□□□ -1.91
ERVFC1-1P60608 RNU6-516P-201ENST00000411381 104 ntBASIC3.14□□□□□ -1.91
ERVFC1-1P60608 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.14□□□□□ -1.91
ERVFC1-1P60608 AC092447.6-201ENST00000414578 210 ntBASIC3.14□□□□□ -1.91
ERVFC1-1P60608 AC114491.1-201ENST00000416095 246 ntBASIC3.14□□□□□ -1.91
ERVFC1-1P60608 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.14□□□□□ -1.91
ERVFC1-1P60608 AF228730.4-201ENST00000421457 183 ntBASIC3.14□□□□□ -1.91
ERVFC1-1P60608 SAR1AP4-201ENST00000429225 591 ntBASIC3.14□□□□□ -1.91
ERVFC1-1P60608 AC016712.1-201ENST00000431088 378 ntBASIC3.14□□□□□ -1.91
ERVFC1-1P60608 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.14□□□□□ -1.91
ERVFC1-1P60608 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.14□□□□□ -1.91
ERVFC1-1P60608 AC010655.1-201ENST00000449336 292 ntBASIC3.14□□□□□ -1.91
ERVFC1-1P60608 PPIAP3-201ENST00000450588 505 ntBASIC3.14□□□□□ -1.91
ERVFC1-1P60608 snoU109.4-201ENST00000458953 143 ntBASIC3.14□□□□□ -1.91
ERVFC1-1P60608 Y_RNA.632-201ENST00000459189 102 ntBASIC3.14□□□□□ -1.91
ERVFC1-1P60608 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.14□□□□□ -1.91
ERVFC1-1P60608 AC092451.1-201ENST00000480211 153 ntBASIC3.14□□□□□ -1.91
ERVFC1-1P60608 AC068587.1-201ENST00000483613 781 ntBASIC3.14□□□□□ -1.91
ERVFC1-1P60608 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.14□□□□□ -1.91
ERVFC1-1P60608 FAM206BP-201ENST00000510179 541 ntBASIC3.14□□□□□ -1.91
ERVFC1-1P60608 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.14□□□□□ -1.91
ERVFC1-1P60608 RN7SKP256-201ENST00000517201 314 ntBASIC3.14□□□□□ -1.91
ERVFC1-1P60608 RPL7P20-201ENST00000520308 745 ntBASIC3.14□□□□□ -1.91
ERVFC1-1P60608 AP005597.4-201ENST00000526762 229 ntBASIC3.14□□□□□ -1.91
ERVFC1-1P60608 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.14□□□□□ -1.91
ERVFC1-1P60608 AC005668.1-201ENST00000571142 476 ntBASIC3.14□□□□□ -1.91
ERVFC1-1P60608 MIR4703-201ENST00000577728 79 ntBASIC3.14□□□□□ -1.91
ERVFC1-1P60608 MIR4425-201ENST00000580572 84 ntBASIC3.14□□□□□ -1.91
ERVFC1-1P60608 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.14□□□□□ -1.91
ERVFC1-1P60608 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.14□□□□□ -1.91
ERVFC1-1P60608 AC113139.1-201ENST00000605049 239 ntBASIC3.14□□□□□ -1.91
ERVFC1-1P60608 AC090948.1-201ENST00000607464 549 ntBASIC3.14□□□□□ -1.91
ERVFC1-1P60608 AC099778.2-201ENST00000610904 211 ntBASIC3.14□□□□□ -1.91
ERVFC1-1P60608 AC104237.2-201ENST00000612456 443 ntBASIC3.14□□□□□ -1.91
ERVFC1-1P60608 AP001486.3-201ENST00000615334 372 ntBASIC3.14□□□□□ -1.91
ERVFC1-1P60608 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.14□□□□□ -1.91
ERVFC1-1P60608 AC011155.2-201ENST00000623202 216 ntBASIC3.14□□□□□ -1.91
ERVFC1-1P60608 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.14□□□□□ -1.91
ERVFC1-1P60608 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.14□□□□□ -1.91
ERVFC1-1P60608 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
ERVFC1-1P60608 AC244517.1-201ENST00000606030 2086 ntBASIC3.14□□□□□ -1.91
ERVFC1-1P60608 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
ERVFC1-1P60608 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
ERVFC1-1P60608 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.14□□□□□ -1.91
ERVFC1-1P60608 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
ERVFC1-1P60608 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.14□□□□□ -1.91
ERVFC1-1P60608 PABPC1P7-201ENST00000413177 1513 ntBASIC3.14□□□□□ -1.91
ERVFC1-1P60608 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.13□□□□□ -1.91
ERVFC1-1P60608 GABPAP-201ENST00000419271 1356 ntBASIC3.13□□□□□ -1.91
ERVFC1-1P60608 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.13□□□□□ -1.91
ERVFC1-1P60608 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
ERVFC1-1P60608 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.13□□□□□ -1.91
ERVFC1-1P60608 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.13□□□□□ -1.91
ERVFC1-1P60608 Y_RNA.132-201ENST00000363421 102 ntBASIC3.13□□□□□ -1.91
ERVFC1-1P60608 Y_RNA.167-201ENST00000363735 109 ntBASIC3.13□□□□□ -1.91
ERVFC1-1P60608 U3.12-201ENST00000364498 214 ntBASIC3.13□□□□□ -1.91
ERVFC1-1P60608 MT-TC-201ENST00000387405 66 ntBASIC3.13□□□□□ -1.91
ERVFC1-1P60608 RNA5SP397-201ENST00000391323 118 ntBASIC3.13□□□□□ -1.91
ERVFC1-1P60608 AL606923.1-201ENST00000406616 190 ntBASIC3.13□□□□□ -1.91
ERVFC1-1P60608 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.13□□□□□ -1.91
ERVFC1-1P60608 RNU4-26P-201ENST00000410270 107 ntBASIC3.13□□□□□ -1.91
ERVFC1-1P60608 RNU2-29P-201ENST00000410423 189 ntBASIC3.13□□□□□ -1.91
ERVFC1-1P60608 RN7SKP140-201ENST00000411196 284 ntBASIC3.13□□□□□ -1.91
ERVFC1-1P60608 HSPE1P1-201ENST00000421494 318 ntBASIC3.13□□□□□ -1.91
ERVFC1-1P60608 MTCO2P12-201ENST00000427426 682 ntBASIC3.13□□□□□ -1.91
ERVFC1-1P60608 AC011998.1-201ENST00000433403 117 ntBASIC3.13□□□□□ -1.91
ERVFC1-1P60608 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.13□□□□□ -1.91
ERVFC1-1P60608 RPL21P133-201ENST00000443666 476 ntBASIC3.13□□□□□ -1.91
ERVFC1-1P60608 MTND1P18-201ENST00000448191 573 ntBASIC3.13□□□□□ -1.91
ERVFC1-1P60608 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.13□□□□□ -1.91
ERVFC1-1P60608 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.13□□□□□ -1.91
ERVFC1-1P60608 RPL23AP81-201ENST00000455252 467 ntBASIC3.13□□□□□ -1.91
ERVFC1-1P60608 RPS23P7-201ENST00000466210 444 ntBASIC3.13□□□□□ -1.91
ERVFC1-1P60608 MTND4P17-201ENST00000470444 350 ntBASIC3.13□□□□□ -1.91
ERVFC1-1P60608 AP002884.2-201ENST00000471647 395 ntBASIC3.13□□□□□ -1.91
ERVFC1-1P60608 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
ERVFC1-1P60608 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.13□□□□□ -1.91
ERVFC1-1P60608 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
ERVFC1-1P60608 RN7SKP13-201ENST00000515933 244 ntBASIC3.13□□□□□ -1.91
ERVFC1-1P60608 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.13□□□□□ -1.91
ERVFC1-1P60608 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.13□□□□□ -1.91
ERVFC1-1P60608 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.13□□□□□ -1.91
ERVFC1-1P60608 DEFB108D-201ENST00000527787 222 ntBASIC3.13□□□□□ -1.91
ERVFC1-1P60608 AC109635.4-202ENST00000531666 412 ntBASIC3.13□□□□□ -1.91
ERVFC1-1P60608 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.13□□□□□ -1.91
ERVFC1-1P60608 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.13□□□□□ -1.91
ERVFC1-1P60608 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.13□□□□□ -1.91
ERVFC1-1P60608 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.13□□□□□ -1.91
ERVFC1-1P60608 MTCO3P13-201ENST00000577757 781 ntBASIC3.13□□□□□ -1.91
ERVFC1-1P60608 MIR4277-201ENST00000578298 84 ntBASIC3.13□□□□□ -1.91
ERVFC1-1P60608 MIR5583-1-201ENST00000580941 59 ntBASIC3.13□□□□□ -1.91
ERVFC1-1P60608 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.13□□□□□ -1.91
ERVFC1-1P60608 RNA5SP108-201ENST00000605921 117 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms