Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 RNU6-1092P-201ENST00000516955 87 ntBASIC4.03□□□□□ -1.76
RHBDL3P58872 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.03□□□□□ -1.76
RHBDL3P58872 AC060788.1-201ENST00000521318 469 ntBASIC4.03□□□□□ -1.76
RHBDL3P58872 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.03□□□□□ -1.76
RHBDL3P58872 AP003181.2-201ENST00000528941 181 ntBASIC4.03□□□□□ -1.76
RHBDL3P58872 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RHBDL3P58872 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.03□□□□□ -1.76
RHBDL3P58872 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.03□□□□□ -1.76
RHBDL3P58872 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.03□□□□□ -1.76
RHBDL3P58872 AC006504.3-201ENST00000586818 523 ntBASIC4.03□□□□□ -1.76
RHBDL3P58872 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.03□□□□□ -1.76
RHBDL3P58872 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.03□□□□□ -1.76
RHBDL3P58872 AL136363.1-201ENST00000605349 337 ntBASIC4.03□□□□□ -1.76
RHBDL3P58872 AC099778.2-201ENST00000610904 211 ntBASIC4.03□□□□□ -1.76
RHBDL3P58872 AC131902.3-201ENST00000611767 581 ntBASIC4.03□□□□□ -1.76
RHBDL3P58872 AL158063.1-201ENST00000615349 536 ntBASIC4.03□□□□□ -1.76
RHBDL3P58872 Z69908.1-201ENST00000622603 247 ntBASIC4.03□□□□□ -1.76
RHBDL3P58872 AC007998.5-201ENST00000622938 237 ntBASIC4.03□□□□□ -1.76
RHBDL3P58872 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.03□□□□□ -1.76
RHBDL3P58872 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.03□□□□□ -1.76
RHBDL3P58872 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.03□□□□□ -1.76
RHBDL3P58872 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.03□□□□□ -1.76
RHBDL3P58872 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.03□□□□□ -1.76
RHBDL3P58872 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RHBDL3P58872 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RHBDL3P58872 AL359693.1-201ENST00000614959 2407 ntBASIC4.02□□□□□ -1.77
RHBDL3P58872 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
RHBDL3P58872 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RHBDL3P58872 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
RHBDL3P58872 AC092435.3-201ENST00000565538 3654 ntBASIC4.02□□□□□ -1.77
RHBDL3P58872 MAPK10-322ENST00000641485 4530 ntBASIC4.02□□□□□ -1.77
RHBDL3P58872 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RHBDL3P58872 RNA5SP374-201ENST00000362939 125 ntBASIC4.02□□□□□ -1.77
RHBDL3P58872 RNU1-89P-201ENST00000384592 164 ntBASIC4.02□□□□□ -1.77
RHBDL3P58872 U3.19-201ENST00000390893 196 ntBASIC4.02□□□□□ -1.77
RHBDL3P58872 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.02□□□□□ -1.77
RHBDL3P58872 Z92545.1-201ENST00000411782 234 ntBASIC4.02□□□□□ -1.77
RHBDL3P58872 Z99755.1-201ENST00000414048 380 ntBASIC4.02□□□□□ -1.77
RHBDL3P58872 ELOCP4-201ENST00000420090 333 ntBASIC4.02□□□□□ -1.77
RHBDL3P58872 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.02□□□□□ -1.77
RHBDL3P58872 TRIAP1P1-201ENST00000427062 225 ntBASIC4.02□□□□□ -1.77
RHBDL3P58872 DPPA2P1-201ENST00000428060 556 ntBASIC4.02□□□□□ -1.77
RHBDL3P58872 NEFMP1-201ENST00000443423 1006 ntBASIC4.02□□□□□ -1.77
RHBDL3P58872 AL136380.1-201ENST00000447970 162 ntBASIC4.02□□□□□ -1.77
RHBDL3P58872 SNORD42A-201ENST00000459584 64 ntBASIC4.02□□□□□ -1.77
RHBDL3P58872 RPS29P2-201ENST00000479278 136 ntBASIC4.02□□□□□ -1.77
RHBDL3P58872 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.02□□□□□ -1.77
RHBDL3P58872 MTND1P3-201ENST00000484956 952 ntBASIC4.02□□□□□ -1.77
RHBDL3P58872 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC4.02□□□□□ -1.77
RHBDL3P58872 AC138853.1-201ENST00000503549 823 ntBASIC4.02□□□□□ -1.77
RHBDL3P58872 ARL4AP2-201ENST00000507378 601 ntBASIC4.02□□□□□ -1.77
RHBDL3P58872 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.02□□□□□ -1.77
RHBDL3P58872 Y_RNA.695-201ENST00000516715 107 ntBASIC4.02□□□□□ -1.77
RHBDL3P58872 RNU6-1231P-201ENST00000517185 103 ntBASIC4.02□□□□□ -1.77
RHBDL3P58872 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.02□□□□□ -1.77
RHBDL3P58872 AP003122.4-201ENST00000530980 758 ntBASIC4.02□□□□□ -1.77
RHBDL3P58872 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.02□□□□□ -1.77
RHBDL3P58872 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.02□□□□□ -1.77
RHBDL3P58872 AL121576.1-201ENST00000556055 276 ntBASIC4.02□□□□□ -1.77
RHBDL3P58872 AC006557.5-201ENST00000603126 811 ntBASIC4.02□□□□□ -1.77
RHBDL3P58872 DPPA3P3-201ENST00000603842 430 ntBASIC4.02□□□□□ -1.77
RHBDL3P58872 AC104763.2-201ENST00000604179 382 ntBASIC4.02□□□□□ -1.77
RHBDL3P58872 AC136601.2-201ENST00000604356 474 ntBASIC4.02□□□□□ -1.77
RHBDL3P58872 OR2AS2P-201ENST00000606902 342 ntBASIC4.02□□□□□ -1.77
RHBDL3P58872 AL451064.1-201ENST00000607718 471 ntBASIC4.02□□□□□ -1.77
RHBDL3P58872 AC103710.2-201ENST00000609912 942 ntBASIC4.02□□□□□ -1.77
RHBDL3P58872 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.02□□□□□ -1.77
RHBDL3P58872 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
RHBDL3P58872 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.01□□□□□ -1.77
RHBDL3P58872 RPS4XP5-202ENST00000449995 1334 ntBASIC4.01□□□□□ -1.77
RHBDL3P58872 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
RHBDL3P58872 AC073343.1-201ENST00000328239 651 ntBASIC4.01□□□□□ -1.77
RHBDL3P58872 Y_RNA.77-201ENST00000362962 107 ntBASIC4.01□□□□□ -1.77
RHBDL3P58872 RNU6-960P-201ENST00000364056 120 ntBASIC4.01□□□□□ -1.77
RHBDL3P58872 RNU5E-6P-201ENST00000365574 115 ntBASIC4.01□□□□□ -1.77
RHBDL3P58872 RNU6-701P-201ENST00000384059 107 ntBASIC4.01□□□□□ -1.77
RHBDL3P58872 MIR128-1-201ENST00000384921 82 ntBASIC4.01□□□□□ -1.77
RHBDL3P58872 AC099548.1-201ENST00000421443 426 ntBASIC4.01□□□□□ -1.77
RHBDL3P58872 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.01□□□□□ -1.77
RHBDL3P58872 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.01□□□□□ -1.77
RHBDL3P58872 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC4.01□□□□□ -1.77
RHBDL3P58872 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.01□□□□□ -1.77
RHBDL3P58872 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC4.01□□□□□ -1.77
RHBDL3P58872 ARPC3P1-201ENST00000437218 533 ntBASIC4.01□□□□□ -1.77
RHBDL3P58872 PGBD4P3-201ENST00000440731 581 ntBASIC4.01□□□□□ -1.77
RHBDL3P58872 MTATP6P30-201ENST00000443540 664 ntBASIC4.01□□□□□ -1.77
RHBDL3P58872 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.01□□□□□ -1.77
RHBDL3P58872 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.01□□□□□ -1.77
RHBDL3P58872 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.01□□□□□ -1.77
RHBDL3P58872 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC4.01□□□□□ -1.77
RHBDL3P58872 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.01□□□□□ -1.77
RHBDL3P58872 SNORA31.21-201ENST00000517180 77 ntBASIC4.01□□□□□ -1.77
RHBDL3P58872 AP006587.4-201ENST00000526053 529 ntBASIC4.01□□□□□ -1.77
RHBDL3P58872 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.01□□□□□ -1.77
RHBDL3P58872 ARL2BPP2-201ENST00000550907 489 ntBASIC4.01□□□□□ -1.77
RHBDL3P58872 MIR5004-201ENST00000579078 107 ntBASIC4.01□□□□□ -1.77
RHBDL3P58872 AC174048.1-201ENST00000603389 144 ntBASIC4.01□□□□□ -1.77
RHBDL3P58872 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RHBDL3P58872 AC103858.2-201ENST00000621471 543 ntBASIC4.01□□□□□ -1.77
RHBDL3P58872 PISRT1-201ENST00000626175 531 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms