Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 SNORA31.8-201ENST00000516327 108 ntBASIC3.11□□□□□ -1.91
CDH11P55287 SNORA64.4-201ENST00000516632 81 ntBASIC3.11□□□□□ -1.91
CDH11P55287 Vault.3-201ENST00000516676 95 ntBASIC3.11□□□□□ -1.91
CDH11P55287 RN7SKP289-201ENST00000517244 295 ntBASIC3.11□□□□□ -1.91
CDH11P55287 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.11□□□□□ -1.91
CDH11P55287 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC3.11□□□□□ -1.91
CDH11P55287 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.11□□□□□ -1.91
CDH11P55287 AC245014.2-201ENST00000603689 287 ntBASIC3.11□□□□□ -1.91
CDH11P55287 AC012468.1-201ENST00000604888 430 ntBASIC3.11□□□□□ -1.91
CDH11P55287 AC246785.4-201ENST00000605374 287 ntBASIC3.11□□□□□ -1.91
CDH11P55287 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.11□□□□□ -1.91
CDH11P55287 PLCE1P1-201ENST00000622094 305 ntBASIC3.11□□□□□ -1.91
CDH11P55287 AC068880.5-201ENST00000624331 290 ntBASIC3.11□□□□□ -1.91
CDH11P55287 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.11□□□□□ -1.91
CDH11P55287 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.11□□□□□ -1.91
CDH11P55287 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
CDH11P55287 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.11□□□□□ -1.91
CDH11P55287 MTND5P1-201ENST00000445440 1375 ntBASIC3.11□□□□□ -1.91
CDH11P55287 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CDH11P55287 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
CDH11P55287 AC032011.1-201ENST00000611703 1549 ntBASIC3.1□□□□□ -1.91
CDH11P55287 AL672296.1-201ENST00000427780 2158 ntBASIC3.1□□□□□ -1.91
CDH11P55287 AC017071.1-201ENST00000564407 2204 ntBASIC3.1□□□□□ -1.91
CDH11P55287 RNA5SP383-201ENST00000362934 120 ntBASIC3.1□□□□□ -1.91
CDH11P55287 RNU6-282P-201ENST00000365357 103 ntBASIC3.1□□□□□ -1.91
CDH11P55287 RNU5A-6P-201ENST00000384136 116 ntBASIC3.1□□□□□ -1.91
CDH11P55287 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CDH11P55287 AC110754.1-201ENST00000399740 601 ntBASIC3.1□□□□□ -1.91
CDH11P55287 RNU2-62P-201ENST00000410868 191 ntBASIC3.1□□□□□ -1.91
CDH11P55287 ELOCP17-201ENST00000414751 326 ntBASIC3.1□□□□□ -1.91
CDH11P55287 UBE2FP1-201ENST00000416536 447 ntBASIC3.1□□□□□ -1.91
CDH11P55287 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CDH11P55287 RPS15AP12-201ENST00000419498 388 ntBASIC3.1□□□□□ -1.91
CDH11P55287 BX842559.1-201ENST00000419615 532 ntBASIC3.1□□□□□ -1.91
CDH11P55287 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.1□□□□□ -1.91
CDH11P55287 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.1□□□□□ -1.91
CDH11P55287 RPL21P66-201ENST00000426566 466 ntBASIC3.1□□□□□ -1.91
CDH11P55287 RPL31P35-201ENST00000431058 377 ntBASIC3.1□□□□□ -1.91
CDH11P55287 AL159987.2-201ENST00000432754 307 ntBASIC3.1□□□□□ -1.91
CDH11P55287 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.1□□□□□ -1.91
CDH11P55287 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC3.1□□□□□ -1.91
CDH11P55287 MTCO3P45-201ENST00000443036 613 ntBASIC3.1□□□□□ -1.91
CDH11P55287 AC008264.1-201ENST00000447612 367 ntBASIC3.1□□□□□ -1.91
CDH11P55287 AC125238.1-201ENST00000448842 249 ntBASIC3.1□□□□□ -1.91
CDH11P55287 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.1□□□□□ -1.91
CDH11P55287 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.1□□□□□ -1.91
CDH11P55287 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.1□□□□□ -1.91
CDH11P55287 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.1□□□□□ -1.91
CDH11P55287 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.1□□□□□ -1.91
CDH11P55287 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.1□□□□□ -1.91
CDH11P55287 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.1□□□□□ -1.91
CDH11P55287 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC3.1□□□□□ -1.91
CDH11P55287 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.1□□□□□ -1.91
CDH11P55287 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CDH11P55287 AC074250.1-201ENST00000511117 192 ntBASIC3.1□□□□□ -1.91
CDH11P55287 AC010265.1-201ENST00000513509 211 ntBASIC3.1□□□□□ -1.91
CDH11P55287 AC090572.1-201ENST00000519251 160 ntBASIC3.1□□□□□ -1.91
CDH11P55287 HMGN1P28-201ENST00000521340 364 ntBASIC3.1□□□□□ -1.91
CDH11P55287 MTCYBP20-201ENST00000524239 1129 ntBASIC3.1□□□□□ -1.91
CDH11P55287 AC123904.3-201ENST00000547218 814 ntBASIC3.1□□□□□ -1.91
CDH11P55287 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.1□□□□□ -1.91
CDH11P55287 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.1□□□□□ -1.91
CDH11P55287 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.1□□□□□ -1.91
CDH11P55287 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.1□□□□□ -1.91
CDH11P55287 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.1□□□□□ -1.91
CDH11P55287 AL391840.1-201ENST00000571144 367 ntBASIC3.1□□□□□ -1.91
CDH11P55287 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.1□□□□□ -1.91
CDH11P55287 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.1□□□□□ -1.91
CDH11P55287 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.1□□□□□ -1.91
CDH11P55287 AP001330.4-201ENST00000604350 154 ntBASIC3.1□□□□□ -1.91
CDH11P55287 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.1□□□□□ -1.91
CDH11P55287 AC006338.1-201ENST00000618453 749 ntBASIC3.1□□□□□ -1.91
CDH11P55287 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.1□□□□□ -1.91
CDH11P55287 U4.6-201ENST00000621618 127 ntBASIC3.1□□□□□ -1.91
CDH11P55287 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.1□□□□□ -1.91
CDH11P55287 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CDH11P55287 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CDH11P55287 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
CDH11P55287 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
CDH11P55287 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.1□□□□□ -1.91
CDH11P55287 CR848007.1-201ENST00000442354 1699 ntBASIC3.1□□□□□ -1.91
CDH11P55287 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.1□□□□□ -1.91
CDH11P55287 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CDH11P55287 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.09□□□□□ -1.91
CDH11P55287 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
CDH11P55287 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CDH11P55287 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.09□□□□□ -1.91
CDH11P55287 U3.11-201ENST00000364476 212 ntBASIC3.09□□□□□ -1.91
CDH11P55287 RNU6-1103P-201ENST00000384150 107 ntBASIC3.09□□□□□ -1.91
CDH11P55287 MIR591-201ENST00000385290 95 ntBASIC3.09□□□□□ -1.91
CDH11P55287 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CDH11P55287 RNU6-278P-201ENST00000390945 109 ntBASIC3.09□□□□□ -1.91
CDH11P55287 AL359634.1-202ENST00000404721 284 ntBASIC3.09□□□□□ -1.91
CDH11P55287 AC127391.1-201ENST00000411737 98 ntBASIC3.09□□□□□ -1.91
CDH11P55287 RPL21P24-201ENST00000413752 448 ntBASIC3.09□□□□□ -1.91
CDH11P55287 Z99755.1-201ENST00000414048 380 ntBASIC3.09□□□□□ -1.91
CDH11P55287 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.09□□□□□ -1.91
CDH11P55287 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.09□□□□□ -1.91
CDH11P55287 TRIAP1P1-201ENST00000427062 225 ntBASIC3.09□□□□□ -1.91
CDH11P55287 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 319.7 ms