Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 AC123786.2-201ENST00000603459 275 ntBASIC1.36□□□□□ -2.19
CLTCL1P53675 FAM71BP1-201ENST00000604431 523 ntBASIC1.36□□□□□ -2.19
CLTCL1P53675 AC004908.2-201ENST00000609090 574 ntBASIC1.36□□□□□ -2.19
CLTCL1P53675 AL589935.2-201ENST00000616471 1231 ntBASIC1.36□□□□□ -2.19
CLTCL1P53675 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.36□□□□□ -2.19
CLTCL1P53675 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.35□□□□□ -2.19
CLTCL1P53675 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.35□□□□□ -2.19
CLTCL1P53675 RNA5SP354-201ENST00000391247 136 ntBASIC1.35□□□□□ -2.19
CLTCL1P53675 RNA5SP450-201ENST00000411206 102 ntBASIC1.35□□□□□ -2.19
CLTCL1P53675 RPL31P2-201ENST00000413849 377 ntBASIC1.35□□□□□ -2.19
CLTCL1P53675 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.35□□□□□ -2.19
CLTCL1P53675 AL591212.2-201ENST00000433923 257 ntBASIC1.35□□□□□ -2.19
CLTCL1P53675 CLIC4P1-201ENST00000453177 535 ntBASIC1.35□□□□□ -2.19
CLTCL1P53675 AC079148.1-201ENST00000565944 819 ntBASIC1.35□□□□□ -2.19
CLTCL1P53675 MIR4698-201ENST00000577795 80 ntBASIC1.35□□□□□ -2.19
CLTCL1P53675 AC010889.1-201ENST00000566193 2666 ntBASIC1.34□□□□□ -2.19
CLTCL1P53675 OR6C66P-201ENST00000414917 930 ntBASIC1.34□□□□□ -2.19
CLTCL1P53675 SNRPFP2-201ENST00000440710 251 ntBASIC1.34□□□□□ -2.19
CLTCL1P53675 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.34□□□□□ -2.19
CLTCL1P53675 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC1.34□□□□□ -2.19
CLTCL1P53675 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.34□□□□□ -2.19
CLTCL1P53675 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.34□□□□□ -2.19
CLTCL1P53675 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC1.34□□□□□ -2.19
CLTCL1P53675 Y_RNA.178-201ENST00000363832 102 ntBASIC1.33□□□□□ -2.2
CLTCL1P53675 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC1.33□□□□□ -2.2
CLTCL1P53675 AC092648.1-201ENST00000425870 423 ntBASIC1.33□□□□□ -2.2
CLTCL1P53675 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.33□□□□□ -2.2
CLTCL1P53675 OR9N1P-202ENST00000494289 481 ntBASIC1.33□□□□□ -2.2
CLTCL1P53675 RNA5SP471-201ENST00000516971 106 ntBASIC1.33□□□□□ -2.2
CLTCL1P53675 SNORA51.12-201ENST00000384448 134 ntBASIC1.33□□□□□ -2.2
CLTCL1P53675 MIR216A-201ENST00000385063 110 ntBASIC1.33□□□□□ -2.2
CLTCL1P53675 AC093155.1-201ENST00000440164 826 ntBASIC1.33□□□□□ -2.2
CLTCL1P53675 AC114801.2-201ENST00000503825 781 ntBASIC1.33□□□□□ -2.2
CLTCL1P53675 AC021087.2-201ENST00000504656 1203 ntBASIC1.33□□□□□ -2.2
CLTCL1P53675 MRPS33P3-201ENST00000513456 322 ntBASIC1.33□□□□□ -2.2
CLTCL1P53675 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC1.33□□□□□ -2.2
CLTCL1P53675 AC090525.3-201ENST00000605601 189 ntBASIC1.33□□□□□ -2.2
CLTCL1P53675 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
CLTCL1P53675 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
CLTCL1P53675 RNU6-882P-201ENST00000391025 103 ntBASIC1.32□□□□□ -2.2
CLTCL1P53675 RPL31P52-201ENST00000407532 367 ntBASIC1.32□□□□□ -2.2
CLTCL1P53675 RPL21P90-201ENST00000415692 466 ntBASIC1.32□□□□□ -2.2
CLTCL1P53675 RPL30P4-201ENST00000429309 333 ntBASIC1.32□□□□□ -2.2
CLTCL1P53675 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.32□□□□□ -2.2
CLTCL1P53675 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC1.32□□□□□ -2.2
CLTCL1P53675 RPS29P28-201ENST00000446439 141 ntBASIC1.32□□□□□ -2.2
CLTCL1P53675 AC004022.1-201ENST00000447766 1066 ntBASIC1.32□□□□□ -2.2
CLTCL1P53675 AC005410.1-202ENST00000460347 485 ntBASIC1.32□□□□□ -2.2
CLTCL1P53675 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.32□□□□□ -2.2
CLTCL1P53675 DEFB108E-201ENST00000524692 240 ntBASIC1.32□□□□□ -2.2
CLTCL1P53675 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.32□□□□□ -2.2
CLTCL1P53675 AC010200.2-201ENST00000605098 235 ntBASIC1.32□□□□□ -2.2
CLTCL1P53675 AL133507.1-201ENST00000605269 557 ntBASIC1.32□□□□□ -2.2
CLTCL1P53675 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.32□□□□□ -2.2
CLTCL1P53675 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.32□□□□□ -2.2
CLTCL1P53675 RNU6-37P-201ENST00000362692 107 ntBASIC1.31□□□□□ -2.2
CLTCL1P53675 RNU6-11P-201ENST00000364234 107 ntBASIC1.31□□□□□ -2.2
CLTCL1P53675 CD24P4-201ENST00000382840 243 ntBASIC1.31□□□□□ -2.2
CLTCL1P53675 RNU11-5P-201ENST00000391216 129 ntBASIC1.31□□□□□ -2.2
CLTCL1P53675 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.31□□□□□ -2.2
CLTCL1P53675 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC1.31□□□□□ -2.2
CLTCL1P53675 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.31□□□□□ -2.2
CLTCL1P53675 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.31□□□□□ -2.2
CLTCL1P53675 RNU1-98P-201ENST00000458992 160 ntBASIC1.31□□□□□ -2.2
CLTCL1P53675 AL121769.1-201ENST00000469473 401 ntBASIC1.31□□□□□ -2.2
CLTCL1P53675 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC1.31□□□□□ -2.2
CLTCL1P53675 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.31□□□□□ -2.2
CLTCL1P53675 HSPE1P4-201ENST00000550617 308 ntBASIC1.31□□□□□ -2.2
CLTCL1P53675 MIR6857-201ENST00000613267 93 ntBASIC1.31□□□□□ -2.2
CLTCL1P53675 AP003122.6-201ENST00000623831 495 ntBASIC1.31□□□□□ -2.2
CLTCL1P53675 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
CLTCL1P53675 SNORD14B-201ENST00000364533 90 ntBASIC1.3□□□□□ -2.2
CLTCL1P53675 MIR627-201ENST00000384979 97 ntBASIC1.3□□□□□ -2.2
CLTCL1P53675 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.3□□□□□ -2.2
CLTCL1P53675 AL596276.1-201ENST00000434465 418 ntBASIC1.3□□□□□ -2.2
CLTCL1P53675 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.3□□□□□ -2.2
CLTCL1P53675 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.3□□□□□ -2.2
CLTCL1P53675 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
CLTCL1P53675 NBEAP1-201ENST00000554452 979 ntBASIC1.3□□□□□ -2.2
CLTCL1P53675 AL161713.1-201ENST00000555538 145 ntBASIC1.3□□□□□ -2.2
CLTCL1P53675 U73023.1-201ENST00000603134 700 ntBASIC1.3□□□□□ -2.2
CLTCL1P53675 AC243773.3-201ENST00000613270 256 ntBASIC1.3□□□□□ -2.2
CLTCL1P53675 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
CLTCL1P53675 SDR42E1P2-201ENST00000614861 481 ntBASIC1.3□□□□□ -2.2
CLTCL1P53675 SDR42E1P4-201ENST00000620894 481 ntBASIC1.3□□□□□ -2.2
CLTCL1P53675 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
CLTCL1P53675 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.3□□□□□ -2.2
CLTCL1P53675 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
CLTCL1P53675 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC1.29□□□□□ -2.2
CLTCL1P53675 EBAG9P1-201ENST00000418955 543 ntBASIC1.29□□□□□ -2.2
CLTCL1P53675 RNU6-1132P-201ENST00000459214 107 ntBASIC1.29□□□□□ -2.2
CLTCL1P53675 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CLTCL1P53675 AC135178.6-201ENST00000605314 398 ntBASIC1.29□□□□□ -2.2
CLTCL1P53675 AC007342.9-201ENST00000623877 1385 ntBASIC1.29□□□□□ -2.2
CLTCL1P53675 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
CLTCL1P53675 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CLTCL1P53675 VN1R96P-201ENST00000446052 858 ntBASIC1.29□□□□□ -2.2
CLTCL1P53675 AC010099.1-201ENST00000455434 375 ntBASIC1.29□□□□□ -2.2
CLTCL1P53675 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.29□□□□□ -2.2
CLTCL1P53675 IMMP1LP2-201ENST00000552954 492 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 136.9 ms