Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
USP11P51784 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.07□□□□□ -1.6
USP11P51784 FTH1P2-201ENST00000466086 412 ntBASIC5.07□□□□□ -1.6
USP11P51784 RPL21P126-201ENST00000470049 478 ntBASIC5.07□□□□□ -1.6
USP11P51784 AP001086.1-201ENST00000494882 321 ntBASIC5.07□□□□□ -1.6
USP11P51784 AC114801.2-201ENST00000503825 781 ntBASIC5.07□□□□□ -1.6
USP11P51784 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC5.07□□□□□ -1.6
USP11P51784 AC009901.1-201ENST00000506703 541 ntBASIC5.07□□□□□ -1.6
USP11P51784 AC015795.1-201ENST00000513669 327 ntBASIC5.07□□□□□ -1.6
USP11P51784 RNU2-69P-201ENST00000516061 100 ntBASIC5.07□□□□□ -1.6
USP11P51784 RNA5SP497-201ENST00000516081 97 ntBASIC5.07□□□□□ -1.6
USP11P51784 RANP3-201ENST00000530970 276 ntBASIC5.07□□□□□ -1.6
USP11P51784 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.07□□□□□ -1.6
USP11P51784 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.07□□□□□ -1.6
USP11P51784 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5.07□□□□□ -1.6
USP11P51784 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC5.07□□□□□ -1.6
USP11P51784 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC5.07□□□□□ -1.6
USP11P51784 AC025588.3-201ENST00000604182 274 ntBASIC5.07□□□□□ -1.6
USP11P51784 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
USP11P51784 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
USP11P51784 MAPK10-303ENST00000641324 3959 ntBASIC5.07□□□□□ -1.6
USP11P51784 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.07□□□□□ -1.6
USP11P51784 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.07□□□□□ -1.6
USP11P51784 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
USP11P51784 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
USP11P51784 AC139713.2-214ENST00000642059 1811 ntBASIC5.07□□□□□ -1.6
USP11P51784 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
USP11P51784 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
USP11P51784 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
USP11P51784 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
USP11P51784 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.06□□□□□ -1.6
USP11P51784 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
USP11P51784 Y_RNA.2-201ENST00000362330 96 ntBASIC5.06□□□□□ -1.6
USP11P51784 SMIM11P1-201ENST00000369586 178 ntBASIC5.06□□□□□ -1.6
USP11P51784 RNU1-63P-201ENST00000383902 164 ntBASIC5.06□□□□□ -1.6
USP11P51784 Y_RNA.461-201ENST00000384263 103 ntBASIC5.06□□□□□ -1.6
USP11P51784 RNU6-842P-201ENST00000384269 107 ntBASIC5.06□□□□□ -1.6
USP11P51784 Y_RNA.483-201ENST00000384380 101 ntBASIC5.06□□□□□ -1.6
USP11P51784 RNU6-393P-201ENST00000384475 107 ntBASIC5.06□□□□□ -1.6
USP11P51784 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.06□□□□□ -1.6
USP11P51784 CHEK2P4-201ENST00000450340 246 ntBASIC5.06□□□□□ -1.6
USP11P51784 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC5.06□□□□□ -1.6
USP11P51784 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC5.06□□□□□ -1.6
USP11P51784 OARD1-209ENST00000471367 401 ntTSL 2 BASIC5.06□□□□□ -1.6
USP11P51784 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.06□□□□□ -1.6
USP11P51784 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.06□□□□□ -1.6
USP11P51784 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.06□□□□□ -1.6
USP11P51784 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC5.06□□□□□ -1.6
USP11P51784 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC5.06□□□□□ -1.6
USP11P51784 AC079587.1-201ENST00000603846 277 ntBASIC5.06□□□□□ -1.6
USP11P51784 AC008162.1-201ENST00000604718 254 ntBASIC5.06□□□□□ -1.6
USP11P51784 AL670379.4-201ENST00000605279 254 ntBASIC5.06□□□□□ -1.6
USP11P51784 AL161423.1-201ENST00000613700 262 ntBASIC5.06□□□□□ -1.6
USP11P51784 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
USP11P51784 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
USP11P51784 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
USP11P51784 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.06□□□□□ -1.6
USP11P51784 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
USP11P51784 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
USP11P51784 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
USP11P51784 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.05□□□□□ -1.6
USP11P51784 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
USP11P51784 Y_RNA.152-201ENST00000363578 100 ntBASIC5.05□□□□□ -1.6
USP11P51784 RNU6-946P-201ENST00000383878 107 ntBASIC5.05□□□□□ -1.6
USP11P51784 RNU6-146P-201ENST00000384602 108 ntBASIC5.05□□□□□ -1.6
USP11P51784 SNORA41-201ENST00000384675 132 ntBASIC5.05□□□□□ -1.6
USP11P51784 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
USP11P51784 RN7SKP159-201ENST00000410657 292 ntBASIC5.05□□□□□ -1.6
USP11P51784 RNU6-516P-201ENST00000411381 104 ntBASIC5.05□□□□□ -1.6
USP11P51784 EIF4A1P3-201ENST00000411521 244 ntBASIC5.05□□□□□ -1.6
USP11P51784 RPL21P109-201ENST00000422213 475 ntBASIC5.05□□□□□ -1.6
USP11P51784 AL732292.1-201ENST00000426692 226 ntBASIC5.05□□□□□ -1.6
USP11P51784 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.05□□□□□ -1.6
USP11P51784 CALM2P2-201ENST00000428512 440 ntBASIC5.05□□□□□ -1.6
USP11P51784 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC5.05□□□□□ -1.6
USP11P51784 AC091390.1-201ENST00000433904 331 ntBASIC5.05□□□□□ -1.6
USP11P51784 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC5.05□□□□□ -1.6
USP11P51784 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.05□□□□□ -1.6
USP11P51784 AC073587.1-201ENST00000447093 876 ntBASIC5.05□□□□□ -1.6
USP11P51784 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.05□□□□□ -1.6
USP11P51784 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC5.05□□□□□ -1.6
USP11P51784 RPL23AP55-201ENST00000498163 452 ntBASIC5.05□□□□□ -1.6
USP11P51784 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC5.05□□□□□ -1.6
USP11P51784 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC5.05□□□□□ -1.6
USP11P51784 AC016065.2-201ENST00000514530 444 ntBASIC5.05□□□□□ -1.6
USP11P51784 RNU6-323P-201ENST00000521915 107 ntBASIC5.05□□□□□ -1.6
USP11P51784 DEFB108D-201ENST00000527787 222 ntBASIC5.05□□□□□ -1.6
USP11P51784 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.05□□□□□ -1.6
USP11P51784 AC091516.1-201ENST00000549191 703 ntBASIC5.05□□□□□ -1.6
USP11P51784 HSBP1P1-201ENST00000555205 166 ntBASIC5.05□□□□□ -1.6
USP11P51784 AC091925.2-201ENST00000625059 256 ntBASIC5.05□□□□□ -1.6
USP11P51784 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
USP11P51784 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
USP11P51784 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.05□□□□□ -1.6
USP11P51784 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
USP11P51784 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
USP11P51784 AC025031.4-201ENST00000621248 3271 ntBASIC5.04□□□□□ -1.6
USP11P51784 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
USP11P51784 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.04□□□□□ -1.6
USP11P51784 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms