Protein–RNA interactions for Protein: P49711

CTCF, Transcriptional repressor CTCF, humanhuman

Predicted RBP Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFP49711 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.73□□□□□ -1.81
CTCFP49711 UBL5P2-201ENST00000583788 219 ntBASIC3.73□□□□□ -1.81
CTCFP49711 AC239868.4-201ENST00000608318 671 ntBASIC3.73□□□□□ -1.81
CTCFP49711 AC025594.3-201ENST00000613068 790 ntBASIC3.73□□□□□ -1.81
CTCFP49711 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
CTCFP49711 AC009268.2-201ENST00000621925 457 ntBASIC3.73□□□□□ -1.81
CTCFP49711 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.73□□□□□ -1.81
CTCFP49711 AC025048.6-202ENST00000627667 438 ntBASIC3.73□□□□□ -1.81
CTCFP49711 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CTCFP49711 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.73□□□□□ -1.81
CTCFP49711 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.72□□□□□ -1.81
CTCFP49711 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CTCFP49711 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CTCFP49711 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
CTCFP49711 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CTCFP49711 U8.2-201ENST00000363156 134 ntBASIC3.72□□□□□ -1.81
CTCFP49711 RNU5E-8P-201ENST00000363502 116 ntBASIC3.72□□□□□ -1.81
CTCFP49711 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CTCFP49711 RNU6-637P-201ENST00000384050 107 ntBASIC3.72□□□□□ -1.81
CTCFP49711 SNORD115.1-201ENST00000391109 76 ntBASIC3.72□□□□□ -1.81
CTCFP49711 AL591034.1-201ENST00000407447 340 ntBASIC3.72□□□□□ -1.81
CTCFP49711 MTND1P21-201ENST00000412991 285 ntBASIC3.72□□□□□ -1.81
CTCFP49711 AL365338.1-201ENST00000422282 858 ntBASIC3.72□□□□□ -1.81
CTCFP49711 AC019097.1-201ENST00000424783 735 ntBASIC3.72□□□□□ -1.81
CTCFP49711 AC233728.2-201ENST00000425348 757 ntBASIC3.72□□□□□ -1.81
CTCFP49711 AL356583.2-201ENST00000426536 280 ntBASIC3.72□□□□□ -1.81
CTCFP49711 MTATP6P4-201ENST00000427725 675 ntBASIC3.72□□□□□ -1.81
CTCFP49711 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.72□□□□□ -1.81
CTCFP49711 MTND1P28-201ENST00000435623 950 ntBASIC3.72□□□□□ -1.81
CTCFP49711 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.72□□□□□ -1.81
CTCFP49711 AL590365.1-201ENST00000450788 243 ntBASIC3.72□□□□□ -1.81
CTCFP49711 SSXP4-201ENST00000451349 245 ntBASIC3.72□□□□□ -1.81
CTCFP49711 RPL23AP31-201ENST00000456160 467 ntBASIC3.72□□□□□ -1.81
CTCFP49711 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.72□□□□□ -1.81
CTCFP49711 RPS29P26-201ENST00000477483 171 ntBASIC3.72□□□□□ -1.81
CTCFP49711 AC112204.1-201ENST00000502591 103 ntBASIC3.72□□□□□ -1.81
CTCFP49711 AC108210.2-201ENST00000503681 201 ntBASIC3.72□□□□□ -1.81
CTCFP49711 RNA5SP24-201ENST00000516478 95 ntBASIC3.72□□□□□ -1.81
CTCFP49711 RNU6-798P-201ENST00000516912 103 ntBASIC3.72□□□□□ -1.81
CTCFP49711 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.72□□□□□ -1.81
CTCFP49711 AL133271.1-201ENST00000538229 291 ntBASIC3.72□□□□□ -1.81
CTCFP49711 AC011602.1-201ENST00000546484 331 ntBASIC3.72□□□□□ -1.81
CTCFP49711 AC125611.2-201ENST00000551907 647 ntBASIC3.72□□□□□ -1.81
CTCFP49711 AP001330.4-201ENST00000604350 154 ntBASIC3.72□□□□□ -1.81
CTCFP49711 OR10AB1P-201ENST00000609613 938 ntBASIC3.72□□□□□ -1.81
CTCFP49711 AC138749.5-201ENST00000611461 208 ntBASIC3.72□□□□□ -1.81
CTCFP49711 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
CTCFP49711 AC116165.2-201ENST00000616705 206 ntBASIC3.72□□□□□ -1.81
CTCFP49711 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CTCFP49711 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.72□□□□□ -1.81
CTCFP49711 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CTCFP49711 AC009487.2-201ENST00000420969 6821 ntBASIC3.72□□□□□ -1.81
CTCFP49711 AC080128.1-201ENST00000474389 1917 ntBASIC3.72□□□□□ -1.81
CTCFP49711 RNU6-173P-201ENST00000364215 104 ntBASIC3.71□□□□□ -1.82
CTCFP49711 MIR19A-201ENST00000384878 82 ntBASIC3.71□□□□□ -1.82
CTCFP49711 RN7SKP220-201ENST00000410611 288 ntBASIC3.71□□□□□ -1.82
CTCFP49711 Y_RNA.608-201ENST00000410647 95 ntBASIC3.71□□□□□ -1.82
CTCFP49711 SEPT2P1-201ENST00000419651 180 ntBASIC3.71□□□□□ -1.82
CTCFP49711 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.71□□□□□ -1.82
CTCFP49711 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.71□□□□□ -1.82
CTCFP49711 AC024082.2-201ENST00000434771 238 ntBASIC3.71□□□□□ -1.82
CTCFP49711 SNRPEP4-201ENST00000435815 279 ntBASIC3.71□□□□□ -1.82
CTCFP49711 MTCO2P16-201ENST00000436962 677 ntBASIC3.71□□□□□ -1.82
CTCFP49711 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.71□□□□□ -1.82
CTCFP49711 AC128713.1-201ENST00000471495 306 ntBASIC3.71□□□□□ -1.82
CTCFP49711 AC084357.1-201ENST00000473404 255 ntBASIC3.71□□□□□ -1.82
CTCFP49711 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.71□□□□□ -1.82
CTCFP49711 FCF1P3-201ENST00000496394 590 ntBASIC3.71□□□□□ -1.82
CTCFP49711 MTND5P13-201ENST00000513046 1079 ntBASIC3.71□□□□□ -1.82
CTCFP49711 RNU6-201P-201ENST00000517100 61 ntBASIC3.71□□□□□ -1.82
CTCFP49711 MED28P6-201ENST00000558776 231 ntBASIC3.71□□□□□ -1.82
CTCFP49711 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CTCFP49711 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.71□□□□□ -1.82
CTCFP49711 AC068276.1-201ENST00000605793 379 ntBASIC3.71□□□□□ -1.82
CTCFP49711 AC009090.3-201ENST00000616553 565 ntBASIC3.71□□□□□ -1.82
CTCFP49711 AC092140.2-201ENST00000618027 521 ntBASIC3.71□□□□□ -1.82
CTCFP49711 AL356321.1-201ENST00000621360 228 ntBASIC3.71□□□□□ -1.82
CTCFP49711 AC112204.3-201ENST00000623822 332 ntBASIC3.71□□□□□ -1.82
CTCFP49711 AC064859.1-201ENST00000624741 174 ntBASIC3.71□□□□□ -1.82
CTCFP49711 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.71□□□□□ -1.82
CTCFP49711 AP003399.1-201ENST00000637534 361 ntBASIC3.71□□□□□ -1.82
CTCFP49711 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CTCFP49711 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CTCFP49711 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.7□□□□□ -1.82
CTCFP49711 AL138713.1-201ENST00000624026 2130 ntBASIC3.7□□□□□ -1.82
CTCFP49711 RNU6-754P-201ENST00000391166 107 ntBASIC3.7□□□□□ -1.82
CTCFP49711 RNU1-101P-201ENST00000391171 127 ntBASIC3.7□□□□□ -1.82
CTCFP49711 RNU6-516P-201ENST00000411381 104 ntBASIC3.7□□□□□ -1.82
CTCFP49711 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.7□□□□□ -1.82
CTCFP49711 RPS7P13-201ENST00000413955 498 ntBASIC3.7□□□□□ -1.82
CTCFP49711 BMS1P22-201ENST00000414726 313 ntBASIC3.7□□□□□ -1.82
CTCFP49711 USP9YP13-201ENST00000417797 480 ntBASIC3.7□□□□□ -1.82
CTCFP49711 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.7□□□□□ -1.82
CTCFP49711 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.7□□□□□ -1.82
CTCFP49711 PPP1R11P2-201ENST00000423543 382 ntBASIC3.7□□□□□ -1.82
CTCFP49711 RPL26P6-201ENST00000440913 438 ntBASIC3.7□□□□□ -1.82
CTCFP49711 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.7□□□□□ -1.82
CTCFP49711 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.7□□□□□ -1.82
CTCFP49711 USP9YP12-201ENST00000450481 570 ntBASIC3.7□□□□□ -1.82
CTCFP49711 RPS4XP22-201ENST00000480755 780 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms