Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.9□□□□□ -1.95
TNFRSF4P43489 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.9□□□□□ -1.95
TNFRSF4P43489 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.9□□□□□ -1.95
TNFRSF4P43489 CU459211.1-201ENST00000635667 749 ntBASIC2.9□□□□□ -1.95
TNFRSF4P43489 MAPK10-362ENST00000641864 4484 ntBASIC2.9□□□□□ -1.95
TNFRSF4P43489 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
TNFRSF4P43489 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
TNFRSF4P43489 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
TNFRSF4P43489 AC092125.1-201ENST00000562568 1995 ntBASIC2.89□□□□□ -1.95
TNFRSF4P43489 FTLP6-201ENST00000355274 422 ntBASIC2.89□□□□□ -1.95
TNFRSF4P43489 RNU6-660P-201ENST00000364566 109 ntBASIC2.89□□□□□ -1.95
TNFRSF4P43489 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
TNFRSF4P43489 MIR325-201ENST00000385260 98 ntBASIC2.89□□□□□ -1.95
TNFRSF4P43489 SAR1AP2-201ENST00000392696 594 ntBASIC2.89□□□□□ -1.95
TNFRSF4P43489 AL109755.1-201ENST00000401791 649 ntBASIC2.89□□□□□ -1.95
TNFRSF4P43489 RPS4XP8-201ENST00000402039 771 ntBASIC2.89□□□□□ -1.95
TNFRSF4P43489 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.89□□□□□ -1.95
TNFRSF4P43489 AL445669.1-201ENST00000426743 755 ntBASIC2.89□□□□□ -1.95
TNFRSF4P43489 RPS15AP36-201ENST00000492022 382 ntBASIC2.89□□□□□ -1.95
TNFRSF4P43489 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
TNFRSF4P43489 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.89□□□□□ -1.95
TNFRSF4P43489 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
TNFRSF4P43489 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
TNFRSF4P43489 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
TNFRSF4P43489 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.89□□□□□ -1.95
TNFRSF4P43489 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.89□□□□□ -1.95
TNFRSF4P43489 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.89□□□□□ -1.95
TNFRSF4P43489 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.89□□□□□ -1.95
TNFRSF4P43489 AC005951.2-201ENST00000576282 495 ntBASIC2.89□□□□□ -1.95
TNFRSF4P43489 AF038458.1-201ENST00000588406 262 ntBASIC2.89□□□□□ -1.95
TNFRSF4P43489 AC007619.2-201ENST00000605743 379 ntBASIC2.89□□□□□ -1.95
TNFRSF4P43489 AC004908.2-201ENST00000609090 574 ntBASIC2.89□□□□□ -1.95
TNFRSF4P43489 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
TNFRSF4P43489 AC122133.1-201ENST00000613964 233 ntBASIC2.89□□□□□ -1.95
TNFRSF4P43489 AC010133.1-201ENST00000615809 842 ntBASIC2.89□□□□□ -1.95
TNFRSF4P43489 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.89□□□□□ -1.95
TNFRSF4P43489 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.89□□□□□ -1.95
TNFRSF4P43489 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
TNFRSF4P43489 MTND4P16-201ENST00000466108 1367 ntBASIC2.88□□□□□ -1.95
TNFRSF4P43489 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
TNFRSF4P43489 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
TNFRSF4P43489 AL049641.1-201ENST00000441055 1948 ntBASIC2.88□□□□□ -1.95
TNFRSF4P43489 AC007785.2-201ENST00000598627 1916 ntBASIC2.88□□□□□ -1.95
TNFRSF4P43489 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.88□□□□□ -1.95
TNFRSF4P43489 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
TNFRSF4P43489 U3.6-201ENST00000363622 211 ntBASIC2.88□□□□□ -1.95
TNFRSF4P43489 RNU6-553P-201ENST00000364047 96 ntBASIC2.88□□□□□ -1.95
TNFRSF4P43489 CD24P4-201ENST00000382840 243 ntBASIC2.88□□□□□ -1.95
TNFRSF4P43489 RNU1-39P-201ENST00000383897 165 ntBASIC2.88□□□□□ -1.95
TNFRSF4P43489 RNU5A-2P-201ENST00000384337 116 ntBASIC2.88□□□□□ -1.95
TNFRSF4P43489 SNORD116-8-201ENST00000384365 95 ntBASIC2.88□□□□□ -1.95
TNFRSF4P43489 RNU6-769P-201ENST00000384407 104 ntBASIC2.88□□□□□ -1.95
TNFRSF4P43489 EI24P2-201ENST00000397776 1076 ntBASIC2.88□□□□□ -1.95
TNFRSF4P43489 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.88□□□□□ -1.95
TNFRSF4P43489 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.88□□□□□ -1.95
TNFRSF4P43489 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.88□□□□□ -1.95
TNFRSF4P43489 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.88□□□□□ -1.95
TNFRSF4P43489 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.88□□□□□ -1.95
TNFRSF4P43489 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.88□□□□□ -1.95
TNFRSF4P43489 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.88□□□□□ -1.95
TNFRSF4P43489 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.88□□□□□ -1.95
TNFRSF4P43489 CBWD4P-201ENST00000445695 655 ntBASIC2.88□□□□□ -1.95
TNFRSF4P43489 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.88□□□□□ -1.95
TNFRSF4P43489 AC010099.1-201ENST00000455434 375 ntBASIC2.88□□□□□ -1.95
TNFRSF4P43489 SNORD109B-201ENST00000458961 67 ntBASIC2.88□□□□□ -1.95
TNFRSF4P43489 SNORD109A-201ENST00000459128 67 ntBASIC2.88□□□□□ -1.95
TNFRSF4P43489 SETP11-201ENST00000473027 690 ntBASIC2.88□□□□□ -1.95
TNFRSF4P43489 RN7SL442P-201ENST00000473804 320 ntBASIC2.88□□□□□ -1.95
TNFRSF4P43489 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.88□□□□□ -1.95
TNFRSF4P43489 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.88□□□□□ -1.95
TNFRSF4P43489 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.88□□□□□ -1.95
TNFRSF4P43489 MTND1P22-201ENST00000510572 951 ntBASIC2.88□□□□□ -1.95
TNFRSF4P43489 AC010486.3-201ENST00000511602 785 ntBASIC2.88□□□□□ -1.95
TNFRSF4P43489 AC010265.1-201ENST00000513509 211 ntBASIC2.88□□□□□ -1.95
TNFRSF4P43489 AC087373.1-201ENST00000524920 491 ntBASIC2.88□□□□□ -1.95
TNFRSF4P43489 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.88□□□□□ -1.95
TNFRSF4P43489 AC079600.2-201ENST00000550076 130 ntBASIC2.88□□□□□ -1.95
TNFRSF4P43489 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.88□□□□□ -1.95
TNFRSF4P43489 DNAJC8P1-201ENST00000554535 372 ntBASIC2.88□□□□□ -1.95
TNFRSF4P43489 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.88□□□□□ -1.95
TNFRSF4P43489 MIR3186-201ENST00000577404 85 ntBASIC2.88□□□□□ -1.95
TNFRSF4P43489 AC099778.2-201ENST00000610904 211 ntBASIC2.88□□□□□ -1.95
TNFRSF4P43489 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.88□□□□□ -1.95
TNFRSF4P43489 SDR42E1P2-201ENST00000614861 481 ntBASIC2.88□□□□□ -1.95
TNFRSF4P43489 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.88□□□□□ -1.95
TNFRSF4P43489 AC091931.1-201ENST00000623488 728 ntBASIC2.88□□□□□ -1.95
TNFRSF4P43489 AC112204.3-201ENST00000623822 332 ntBASIC2.88□□□□□ -1.95
TNFRSF4P43489 AC091965.5-201ENST00000624785 342 ntBASIC2.88□□□□□ -1.95
TNFRSF4P43489 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.88□□□□□ -1.95
TNFRSF4P43489 MTND5P33-201ENST00000571250 1450 ntBASIC2.88□□□□□ -1.95
TNFRSF4P43489 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
TNFRSF4P43489 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
TNFRSF4P43489 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.88□□□□□ -1.95
TNFRSF4P43489 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.87□□□□□ -1.95
TNFRSF4P43489 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
TNFRSF4P43489 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
TNFRSF4P43489 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
TNFRSF4P43489 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
TNFRSF4P43489 RNU6-799P-201ENST00000363567 107 ntBASIC2.87□□□□□ -1.95
TNFRSF4P43489 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 156.7 ms