Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 AC026241.1-201ENST00000517873 2142 ntBASIC2.4□□□□□ -2.03
BRCA1P38398 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
BRCA1P38398 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
BRCA1P38398 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
BRCA1P38398 RNU6-1300P-201ENST00000391046 108 ntBASIC2.39□□□□□ -2.03
BRCA1P38398 AC092638.1-201ENST00000411966 1275 ntBASIC2.39□□□□□ -2.03
BRCA1P38398 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.39□□□□□ -2.03
BRCA1P38398 HMGN2P30-201ENST00000423237 256 ntBASIC2.39□□□□□ -2.03
BRCA1P38398 VN1R10P-201ENST00000447106 875 ntBASIC2.39□□□□□ -2.03
BRCA1P38398 COX6CP18-201ENST00000448769 222 ntBASIC2.39□□□□□ -2.03
BRCA1P38398 snoU13.28-201ENST00000459235 104 ntBASIC2.39□□□□□ -2.03
BRCA1P38398 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.39□□□□□ -2.03
BRCA1P38398 AC068781.1-201ENST00000488231 618 ntBASIC2.39□□□□□ -2.03
BRCA1P38398 TBCAP3-201ENST00000512475 312 ntBASIC2.39□□□□□ -2.03
BRCA1P38398 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.39□□□□□ -2.03
BRCA1P38398 AC015688.2-201ENST00000584523 262 ntBASIC2.39□□□□□ -2.03
BRCA1P38398 AC020895.1-201ENST00000595362 272 ntBASIC2.39□□□□□ -2.03
BRCA1P38398 AC012443.1-201ENST00000605605 231 ntBASIC2.39□□□□□ -2.03
BRCA1P38398 AL592148.2-201ENST00000612210 372 ntBASIC2.39□□□□□ -2.03
BRCA1P38398 AC231657.1-201ENST00000624313 397 ntBASIC2.39□□□□□ -2.03
BRCA1P38398 AL159972.1-201ENST00000625150 448 ntBASIC2.39□□□□□ -2.03
BRCA1P38398 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC2.39□□□□□ -2.03
BRCA1P38398 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.39□□□□□ -2.03
BRCA1P38398 AL356473.1-201ENST00000406203 1408 ntBASIC2.39□□□□□ -2.03
BRCA1P38398 AC087359.1-201ENST00000508335 1740 ntBASIC2.39□□□□□ -2.03
BRCA1P38398 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC2.39□□□□□ -2.03
BRCA1P38398 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
BRCA1P38398 RNU5B-4P-201ENST00000363508 111 ntBASIC2.39□□□□□ -2.03
BRCA1P38398 RPL7P27-201ENST00000403775 720 ntBASIC2.39□□□□□ -2.03
BRCA1P38398 MIR1276-201ENST00000408707 83 ntBASIC2.39□□□□□ -2.03
BRCA1P38398 DPPA2P1-201ENST00000428060 556 ntBASIC2.39□□□□□ -2.03
BRCA1P38398 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.39□□□□□ -2.03
BRCA1P38398 Z73417.1-201ENST00000447373 778 ntBASIC2.39□□□□□ -2.03
BRCA1P38398 RNA5SP310-201ENST00000459084 116 ntBASIC2.39□□□□□ -2.03
BRCA1P38398 RNU7-95P-201ENST00000459222 64 ntBASIC2.39□□□□□ -2.03
BRCA1P38398 AL163540.1-201ENST00000485382 386 ntBASIC2.39□□□□□ -2.03
BRCA1P38398 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.39□□□□□ -2.03
BRCA1P38398 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.39□□□□□ -2.03
BRCA1P38398 HSPE1P3-201ENST00000559254 309 ntBASIC2.39□□□□□ -2.03
BRCA1P38398 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.39□□□□□ -2.03
BRCA1P38398 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.39□□□□□ -2.03
BRCA1P38398 AC007275.1-201ENST00000621243 671 ntBASIC2.39□□□□□ -2.03
BRCA1P38398 AC006927.2-201ENST00000639256 389 ntBASIC2.39□□□□□ -2.03
BRCA1P38398 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
BRCA1P38398 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
BRCA1P38398 MIR493-201ENST00000385254 89 ntBASIC2.38□□□□□ -2.03
BRCA1P38398 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
BRCA1P38398 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC2.38□□□□□ -2.03
BRCA1P38398 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.38□□□□□ -2.03
BRCA1P38398 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC2.38□□□□□ -2.03
BRCA1P38398 RPL21P2-201ENST00000440049 481 ntBASIC2.38□□□□□ -2.03
BRCA1P38398 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.38□□□□□ -2.03
BRCA1P38398 AC090453.1-201ENST00000495560 436 ntBASIC2.38□□□□□ -2.03
BRCA1P38398 OR5BM1P-201ENST00000512021 366 ntBASIC2.38□□□□□ -2.03
BRCA1P38398 TRMT112P2-201ENST00000512910 132 ntBASIC2.38□□□□□ -2.03
BRCA1P38398 CASP1P1-201ENST00000526345 212 ntBASIC2.38□□□□□ -2.03
BRCA1P38398 SETP7-201ENST00000552169 453 ntBASIC2.38□□□□□ -2.03
BRCA1P38398 AC138915.2-201ENST00000569776 97 ntBASIC2.38□□□□□ -2.03
BRCA1P38398 LRRC37A5P-203ENST00000580181 585 ntBASIC2.38□□□□□ -2.03
BRCA1P38398 MIR4637-201ENST00000582405 84 ntBASIC2.38□□□□□ -2.03
BRCA1P38398 AC008739.2-201ENST00000597006 317 ntBASIC2.38□□□□□ -2.03
BRCA1P38398 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC2.38□□□□□ -2.03
BRCA1P38398 RPP40P2-201ENST00000603596 712 ntBASIC2.38□□□□□ -2.03
BRCA1P38398 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.37□□□□□ -2.03
BRCA1P38398 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
BRCA1P38398 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.37□□□□□ -2.03
BRCA1P38398 MTCO1P56-201ENST00000401674 224 ntBASIC2.37□□□□□ -2.03
BRCA1P38398 RNA5SP181-201ENST00000410246 98 ntBASIC2.37□□□□□ -2.03
BRCA1P38398 AC027644.1-201ENST00000419595 298 ntBASIC2.37□□□□□ -2.03
BRCA1P38398 DPRXP1-201ENST00000426312 460 ntBASIC2.37□□□□□ -2.03
BRCA1P38398 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.37□□□□□ -2.03
BRCA1P38398 AC245517.4-201ENST00000448601 281 ntBASIC2.37□□□□□ -2.03
BRCA1P38398 RNA5SP182-201ENST00000516064 82 ntBASIC2.37□□□□□ -2.03
BRCA1P38398 RNU6-1261P-201ENST00000517194 104 ntBASIC2.37□□□□□ -2.03
BRCA1P38398 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC2.37□□□□□ -2.03
BRCA1P38398 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.37□□□□□ -2.03
BRCA1P38398 SETP2-201ENST00000553886 926 ntBASIC2.37□□□□□ -2.03
BRCA1P38398 AC106791.2-201ENST00000604680 391 ntBASIC2.37□□□□□ -2.03
BRCA1P38398 AC243773.3-201ENST00000613270 256 ntBASIC2.37□□□□□ -2.03
BRCA1P38398 AL356094.1-201ENST00000624663 1212 ntBASIC2.37□□□□□ -2.03
BRCA1P38398 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.37□□□□□ -2.03
BRCA1P38398 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
BRCA1P38398 RNU6-1078P-201ENST00000364522 103 ntBASIC2.37□□□□□ -2.03
BRCA1P38398 RNU6-1027P-201ENST00000383998 107 ntBASIC2.37□□□□□ -2.03
BRCA1P38398 AL139098.1-201ENST00000407291 389 ntBASIC2.37□□□□□ -2.03
BRCA1P38398 RPS3AP24-201ENST00000407896 734 ntBASIC2.37□□□□□ -2.03
BRCA1P38398 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.37□□□□□ -2.03
BRCA1P38398 HIGD1AP11-201ENST00000438361 280 ntBASIC2.37□□□□□ -2.03
BRCA1P38398 AC079776.3-201ENST00000450665 370 ntBASIC2.37□□□□□ -2.03
BRCA1P38398 OFD1P3Y-201ENST00000453312 783 ntBASIC2.37□□□□□ -2.03
BRCA1P38398 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.37□□□□□ -2.03
BRCA1P38398 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.37□□□□□ -2.03
BRCA1P38398 MTND5P4-201ENST00000514978 288 ntBASIC2.37□□□□□ -2.03
BRCA1P38398 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.37□□□□□ -2.03
BRCA1P38398 RNA5SP490-201ENST00000517141 136 ntBASIC2.37□□□□□ -2.03
BRCA1P38398 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.37□□□□□ -2.03
BRCA1P38398 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.37□□□□□ -2.03
BRCA1P38398 AC010546.1-201ENST00000569391 485 ntBASIC2.37□□□□□ -2.03
BRCA1P38398 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.37□□□□□ -2.03
BRCA1P38398 AC013562.2-201ENST00000611632 603 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms