Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AL606495.1-201ENST00000422100 813 ntBASIC1.7□□□□□ -2.14
CLIP1P30622 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC1.7□□□□□ -2.14
CLIP1P30622 RPL23AP33-201ENST00000442301 452 ntBASIC1.7□□□□□ -2.14
CLIP1P30622 RNU6-113P-201ENST00000516653 101 ntBASIC1.7□□□□□ -2.14
CLIP1P30622 AGGF1P5-201ENST00000567900 919 ntBASIC1.7□□□□□ -2.14
CLIP1P30622 FAM106CP-201ENST00000582212 507 ntBASIC1.7□□□□□ -2.14
CLIP1P30622 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.7□□□□□ -2.14
CLIP1P30622 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.69□□□□□ -2.14
CLIP1P30622 SNORA38-201ENST00000363946 132 ntBASIC1.69□□□□□ -2.14
CLIP1P30622 SNORA62.1-201ENST00000364287 154 ntBASIC1.69□□□□□ -2.14
CLIP1P30622 SNORA18.2-201ENST00000383865 132 ntBASIC1.69□□□□□ -2.14
CLIP1P30622 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.69□□□□□ -2.14
CLIP1P30622 KATNBL1P3-201ENST00000443475 909 ntBASIC1.69□□□□□ -2.14
CLIP1P30622 AL078601.1-201ENST00000444542 271 ntBASIC1.69□□□□□ -2.14
CLIP1P30622 MTCO1P48-201ENST00000448024 1096 ntBASIC1.69□□□□□ -2.14
CLIP1P30622 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.69□□□□□ -2.14
CLIP1P30622 AC096992.1-201ENST00000459808 709 ntBASIC1.69□□□□□ -2.14
CLIP1P30622 RPL37P6-202ENST00000464216 403 ntBASIC1.69□□□□□ -2.14
CLIP1P30622 AL731537.2-201ENST00000561565 951 ntBASIC1.69□□□□□ -2.14
CLIP1P30622 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.69□□□□□ -2.14
CLIP1P30622 AL136363.1-201ENST00000605349 337 ntBASIC1.69□□□□□ -2.14
CLIP1P30622 AC005332.10-201ENST00000612725 619 ntBASIC1.69□□□□□ -2.14
CLIP1P30622 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
CLIP1P30622 Y_RNA.36-201ENST00000362602 112 ntBASIC1.68□□□□□ -2.14
CLIP1P30622 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
CLIP1P30622 RNU1-148P-201ENST00000384472 162 ntBASIC1.68□□□□□ -2.14
CLIP1P30622 POLR2J4-204ENST00000418424 324 ntBASIC1.68□□□□□ -2.14
CLIP1P30622 AC007560.1-201ENST00000426912 237 ntBASIC1.68□□□□□ -2.14
CLIP1P30622 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC1.68□□□□□ -2.14
CLIP1P30622 MTND4LP16-201ENST00000440828 295 ntBASIC1.68□□□□□ -2.14
CLIP1P30622 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC1.68□□□□□ -2.14
CLIP1P30622 AP001804.3-201ENST00000525146 880 ntBASIC1.68□□□□□ -2.14
CLIP1P30622 DUXAP5-201ENST00000529668 529 ntBASIC1.68□□□□□ -2.14
CLIP1P30622 AC022662.1-201ENST00000580252 331 ntBASIC1.68□□□□□ -2.14
CLIP1P30622 AC016727.2-201ENST00000603988 621 ntBASIC1.68□□□□□ -2.14
CLIP1P30622 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.68□□□□□ -2.14
CLIP1P30622 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.68□□□□□ -2.14
CLIP1P30622 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC1.68□□□□□ -2.14
CLIP1P30622 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
CLIP1P30622 SNORA16B-201ENST00000364674 135 ntBASIC1.67□□□□□ -2.14
CLIP1P30622 CIR1P3-201ENST00000405137 479 ntBASIC1.67□□□□□ -2.14
CLIP1P30622 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC1.67□□□□□ -2.14
CLIP1P30622 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.67□□□□□ -2.14
CLIP1P30622 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
CLIP1P30622 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC1.67□□□□□ -2.14
CLIP1P30622 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.67□□□□□ -2.14
CLIP1P30622 AC022880.1-201ENST00000534017 973 ntBASIC1.67□□□□□ -2.14
CLIP1P30622 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
CLIP1P30622 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC1.67□□□□□ -2.14
CLIP1P30622 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CLIP1P30622 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.67□□□□□ -2.14
CLIP1P30622 AC107214.2-201ENST00000608204 634 ntBASIC1.67□□□□□ -2.14
CLIP1P30622 AL161722.3-201ENST00000605789 2983 ntBASIC1.67□□□□□ -2.14
CLIP1P30622 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CLIP1P30622 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
CLIP1P30622 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC1.67□□□□□ -2.14
CLIP1P30622 AC091812.1-201ENST00000432235 1948 ntBASIC1.67□□□□□ -2.14
CLIP1P30622 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
CLIP1P30622 Y_RNA.374-201ENST00000365606 101 ntBASIC1.66□□□□□ -2.14
CLIP1P30622 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.66□□□□□ -2.14
CLIP1P30622 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.66□□□□□ -2.14
CLIP1P30622 COX6CP18-201ENST00000448769 222 ntBASIC1.66□□□□□ -2.14
CLIP1P30622 MTND3P6-201ENST00000485242 339 ntBASIC1.66□□□□□ -2.14
CLIP1P30622 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC1.66□□□□□ -2.14
CLIP1P30622 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.66□□□□□ -2.14
CLIP1P30622 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC1.66□□□□□ -2.14
CLIP1P30622 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.66□□□□□ -2.14
CLIP1P30622 CIR1P1-201ENST00000524055 1133 ntBASIC1.66□□□□□ -2.14
CLIP1P30622 AC109635.4-202ENST00000531666 412 ntBASIC1.66□□□□□ -2.14
CLIP1P30622 HSBP1P1-201ENST00000555205 166 ntBASIC1.66□□□□□ -2.14
CLIP1P30622 SNORD114-21-201ENST00000606412 72 ntBASIC1.66□□□□□ -2.14
CLIP1P30622 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.66□□□□□ -2.14
CLIP1P30622 AC126118.1-201ENST00000607744 628 ntBASIC1.66□□□□□ -2.14
CLIP1P30622 SDR42E1P2-201ENST00000614861 481 ntBASIC1.66□□□□□ -2.14
CLIP1P30622 SDR42E1P4-201ENST00000620894 481 ntBASIC1.66□□□□□ -2.14
CLIP1P30622 RNU4-42P-201ENST00000364738 142 ntBASIC1.66□□□□□ -2.14
CLIP1P30622 MIR513A1-201ENST00000385138 129 ntBASIC1.66□□□□□ -2.14
CLIP1P30622 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.66□□□□□ -2.14
CLIP1P30622 AC005297.2-201ENST00000450430 606 ntBASIC1.66□□□□□ -2.14
CLIP1P30622 PMCHL2-203ENST00000457791 237 ntBASIC1.66□□□□□ -2.14
CLIP1P30622 SNRPFP3-201ENST00000457792 225 ntBASIC1.66□□□□□ -2.14
CLIP1P30622 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.66□□□□□ -2.14
CLIP1P30622 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.66□□□□□ -2.14
CLIP1P30622 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC1.66□□□□□ -2.14
CLIP1P30622 U73023.1-201ENST00000603134 700 ntBASIC1.66□□□□□ -2.14
CLIP1P30622 AC004908.2-201ENST00000609090 574 ntBASIC1.66□□□□□ -2.14
CLIP1P30622 AL627230.6-201ENST00000611129 280 ntBASIC1.66□□□□□ -2.14
CLIP1P30622 MIR7973-1-201ENST00000614683 76 ntBASIC1.66□□□□□ -2.14
CLIP1P30622 AC109809.1-201ENST00000619665 545 ntBASIC1.66□□□□□ -2.14
CLIP1P30622 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC1.66□□□□□ -2.14
CLIP1P30622 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.66□□□□□ -2.14
CLIP1P30622 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.65□□□□□ -2.15
CLIP1P30622 RNU4-38P-201ENST00000364472 129 ntBASIC1.65□□□□□ -2.15
CLIP1P30622 RNU6-1181P-201ENST00000384191 106 ntBASIC1.65□□□□□ -2.15
CLIP1P30622 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC1.65□□□□□ -2.15
CLIP1P30622 AL445687.1-201ENST00000439946 251 ntBASIC1.65□□□□□ -2.15
CLIP1P30622 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.65□□□□□ -2.15
CLIP1P30622 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.65□□□□□ -2.15
CLIP1P30622 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
CLIP1P30622 AC108120.2-201ENST00000512973 294 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms