Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC1.64□□□□□ -2.15
HLA-DMBP28068 RPL23AP7-203ENST00000449021 469 ntBASIC1.64□□□□□ -2.15
HLA-DMBP28068 TPRKBP1-201ENST00000456243 481 ntBASIC1.64□□□□□ -2.15
HLA-DMBP28068 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.64□□□□□ -2.15
HLA-DMBP28068 AC004263.1-201ENST00000479327 332 ntBASIC1.64□□□□□ -2.15
HLA-DMBP28068 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.64□□□□□ -2.15
HLA-DMBP28068 RNU5F-8P-201ENST00000515941 111 ntBASIC1.64□□□□□ -2.15
HLA-DMBP28068 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.64□□□□□ -2.15
HLA-DMBP28068 AP003066.2-201ENST00000529375 555 ntBASIC1.64□□□□□ -2.15
HLA-DMBP28068 ZNF971P-201ENST00000562068 1249 ntBASIC1.64□□□□□ -2.15
HLA-DMBP28068 AGGF1P5-201ENST00000567900 919 ntBASIC1.64□□□□□ -2.15
HLA-DMBP28068 AC135628.1-201ENST00000568867 534 ntBASIC1.64□□□□□ -2.15
HLA-DMBP28068 MIR4448-201ENST00000584360 86 ntBASIC1.64□□□□□ -2.15
HLA-DMBP28068 MIR5002-201ENST00000584713 97 ntBASIC1.64□□□□□ -2.15
HLA-DMBP28068 HMGN2P15-201ENST00000585707 270 ntBASIC1.64□□□□□ -2.15
HLA-DMBP28068 APOOP1-201ENST00000604695 592 ntBASIC1.64□□□□□ -2.15
HLA-DMBP28068 AC100814.1-201ENST00000606963 623 ntBASIC1.64□□□□□ -2.15
HLA-DMBP28068 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.64□□□□□ -2.15
HLA-DMBP28068 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.64□□□□□ -2.15
HLA-DMBP28068 AC009831.4-201ENST00000620744 325 ntBASIC1.64□□□□□ -2.15
HLA-DMBP28068 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.64□□□□□ -2.15
HLA-DMBP28068 OR4G2P-202ENST00000641004 1759 ntBASIC1.64□□□□□ -2.15
HLA-DMBP28068 AC080128.1-201ENST00000474389 1917 ntBASIC1.64□□□□□ -2.15
HLA-DMBP28068 SUCLA2P2-201ENST00000417269 1309 ntBASIC1.64□□□□□ -2.15
HLA-DMBP28068 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.63□□□□□ -2.15
HLA-DMBP28068 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.63□□□□□ -2.15
HLA-DMBP28068 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.63□□□□□ -2.15
HLA-DMBP28068 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
HLA-DMBP28068 HSPE1P11-201ENST00000339579 310 ntBASIC1.63□□□□□ -2.15
HLA-DMBP28068 MIR16-2-201ENST00000362117 81 ntBASIC1.63□□□□□ -2.15
HLA-DMBP28068 RNU6-1066P-201ENST00000363573 105 ntBASIC1.63□□□□□ -2.15
HLA-DMBP28068 RNA5SP160-201ENST00000364866 120 ntBASIC1.63□□□□□ -2.15
HLA-DMBP28068 MIR506-201ENST00000384998 124 ntBASIC1.63□□□□□ -2.15
HLA-DMBP28068 LUZP4P1-201ENST00000415420 344 ntBASIC1.63□□□□□ -2.15
HLA-DMBP28068 AC027644.1-201ENST00000419595 298 ntBASIC1.63□□□□□ -2.15
HLA-DMBP28068 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.63□□□□□ -2.15
HLA-DMBP28068 MTCYBP32-201ENST00000427945 1084 ntBASIC1.63□□□□□ -2.15
HLA-DMBP28068 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC1.63□□□□□ -2.15
HLA-DMBP28068 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.63□□□□□ -2.15
HLA-DMBP28068 COX6CP18-201ENST00000448769 222 ntBASIC1.63□□□□□ -2.15
HLA-DMBP28068 TRGVB-201ENST00000453257 471 ntBASIC1.63□□□□□ -2.15
HLA-DMBP28068 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.63□□□□□ -2.15
HLA-DMBP28068 AC090515.1-201ENST00000465295 476 ntBASIC1.63□□□□□ -2.15
HLA-DMBP28068 MRPS17P3-201ENST00000465453 385 ntBASIC1.63□□□□□ -2.15
HLA-DMBP28068 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
HLA-DMBP28068 AC010460.2-201ENST00000509054 677 ntBASIC1.63□□□□□ -2.15
HLA-DMBP28068 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC1.63□□□□□ -2.15
HLA-DMBP28068 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.63□□□□□ -2.15
HLA-DMBP28068 OR5AQ1P-201ENST00000527596 927 ntBASIC1.63□□□□□ -2.15
HLA-DMBP28068 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.63□□□□□ -2.15
HLA-DMBP28068 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.63□□□□□ -2.15
HLA-DMBP28068 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.63□□□□□ -2.15
HLA-DMBP28068 MIR1273D-201ENST00000577266 86 ntBASIC1.63□□□□□ -2.15
HLA-DMBP28068 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.63□□□□□ -2.15
HLA-DMBP28068 MIR4789-201ENST00000577469 82 ntBASIC1.63□□□□□ -2.15
HLA-DMBP28068 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1.63□□□□□ -2.15
HLA-DMBP28068 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.63□□□□□ -2.15
HLA-DMBP28068 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC1.63□□□□□ -2.15
HLA-DMBP28068 RPAP2P1-201ENST00000603626 1168 ntBASIC1.63□□□□□ -2.15
HLA-DMBP28068 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.63□□□□□ -2.15
HLA-DMBP28068 AC004067.1-201ENST00000608733 700 ntBASIC1.63□□□□□ -2.15
HLA-DMBP28068 AL449363.1-201ENST00000617815 186 ntBASIC1.63□□□□□ -2.15
HLA-DMBP28068 AP000553.5-201ENST00000641933 54 ntBASIC1.63□□□□□ -2.15
HLA-DMBP28068 DDX10P1-201ENST00000448545 1933 ntBASIC1.63□□□□□ -2.15
HLA-DMBP28068 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.63□□□□□ -2.15
HLA-DMBP28068 KPNA2P1-201ENST00000458289 1591 ntBASIC1.63□□□□□ -2.15
HLA-DMBP28068 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.63□□□□□ -2.15
HLA-DMBP28068 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.63□□□□□ -2.15
HLA-DMBP28068 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.63□□□□□ -2.15
HLA-DMBP28068 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.62□□□□□ -2.15
HLA-DMBP28068 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.62□□□□□ -2.15
HLA-DMBP28068 MTND4P27-201ENST00000450813 1354 ntBASIC1.62□□□□□ -2.15
HLA-DMBP28068 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
HLA-DMBP28068 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
HLA-DMBP28068 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.62□□□□□ -2.15
HLA-DMBP28068 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
HLA-DMBP28068 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
HLA-DMBP28068 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
HLA-DMBP28068 SNORA38-201ENST00000363946 132 ntBASIC1.62□□□□□ -2.15
HLA-DMBP28068 SNORA3A-201ENST00000364113 130 ntBASIC1.62□□□□□ -2.15
HLA-DMBP28068 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.62□□□□□ -2.15
HLA-DMBP28068 RNU6-741P-201ENST00000383889 107 ntBASIC1.62□□□□□ -2.15
HLA-DMBP28068 RNU6-220P-201ENST00000390919 107 ntBASIC1.62□□□□□ -2.15
HLA-DMBP28068 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.62□□□□□ -2.15
HLA-DMBP28068 HMGB1P49-201ENST00000418882 569 ntBASIC1.62□□□□□ -2.15
HLA-DMBP28068 AC005005.2-201ENST00000420779 380 ntBASIC1.62□□□□□ -2.15
HLA-DMBP28068 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.62□□□□□ -2.15
HLA-DMBP28068 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.62□□□□□ -2.15
HLA-DMBP28068 CBWD4P-201ENST00000445695 655 ntBASIC1.62□□□□□ -2.15
HLA-DMBP28068 PSPHP1-201ENST00000450062 261 ntBASIC1.62□□□□□ -2.15
HLA-DMBP28068 AL118520.1-201ENST00000450770 291 ntBASIC1.62□□□□□ -2.15
HLA-DMBP28068 AL021397.1-201ENST00000451806 248 ntBASIC1.62□□□□□ -2.15
HLA-DMBP28068 ANKRD26P4-201ENST00000455755 950 ntBASIC1.62□□□□□ -2.15
HLA-DMBP28068 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.62□□□□□ -2.15
HLA-DMBP28068 RNU6-717P-201ENST00000459076 104 ntBASIC1.62□□□□□ -2.15
HLA-DMBP28068 AC026410.2-201ENST00000460281 156 ntBASIC1.62□□□□□ -2.15
HLA-DMBP28068 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.62□□□□□ -2.15
HLA-DMBP28068 AC109486.1-201ENST00000486833 374 ntBASIC1.62□□□□□ -2.15
HLA-DMBP28068 RPS29P21-201ENST00000496272 170 ntBASIC1.62□□□□□ -2.15
HLA-DMBP28068 YWHAEP4-201ENST00000505390 198 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms