Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL8A1P27658 U3.6-201ENST00000363622 211 ntBASIC4.76□□□□□ -1.65
COL8A1P27658 SNORA20-201ENST00000384662 132 ntBASIC4.76□□□□□ -1.65
COL8A1P27658 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
COL8A1P27658 RNU2-2P-201ENST00000410396 191 ntBASIC4.76□□□□□ -1.65
COL8A1P27658 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.76□□□□□ -1.65
COL8A1P27658 AC073587.1-201ENST00000447093 876 ntBASIC4.76□□□□□ -1.65
COL8A1P27658 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC4.76□□□□□ -1.65
COL8A1P27658 EEF1B2P7-201ENST00000451177 676 ntBASIC4.76□□□□□ -1.65
COL8A1P27658 RPS23P2-201ENST00000463671 415 ntBASIC4.76□□□□□ -1.65
COL8A1P27658 RPL23AP2-201ENST00000471227 466 ntBASIC4.76□□□□□ -1.65
COL8A1P27658 RPL21P6-201ENST00000479171 504 ntBASIC4.76□□□□□ -1.65
COL8A1P27658 SNORA31.3-201ENST00000516029 96 ntBASIC4.76□□□□□ -1.65
COL8A1P27658 RNU6-914P-201ENST00000516749 109 ntBASIC4.76□□□□□ -1.65
COL8A1P27658 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC4.76□□□□□ -1.65
COL8A1P27658 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
COL8A1P27658 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.76□□□□□ -1.65
COL8A1P27658 AC005191.1-201ENST00000603950 358 ntBASIC4.76□□□□□ -1.65
COL8A1P27658 RNU2-4P-201ENST00000606190 192 ntBASIC4.76□□□□□ -1.65
COL8A1P27658 U2.15-201ENST00000611544 191 ntBASIC4.76□□□□□ -1.65
COL8A1P27658 U2.16-201ENST00000613119 191 ntBASIC4.76□□□□□ -1.65
COL8A1P27658 U2.12-201ENST00000613778 191 ntBASIC4.76□□□□□ -1.65
COL8A1P27658 U2.9-201ENST00000615427 191 ntBASIC4.76□□□□□ -1.65
COL8A1P27658 U2.11-201ENST00000616345 191 ntBASIC4.76□□□□□ -1.65
COL8A1P27658 U2.2-201ENST00000616535 191 ntBASIC4.76□□□□□ -1.65
COL8A1P27658 U2.3-201ENST00000617785 191 ntBASIC4.76□□□□□ -1.65
COL8A1P27658 U2.19-201ENST00000618602 191 ntBASIC4.76□□□□□ -1.65
COL8A1P27658 RNU2-1-201ENST00000618664 191 ntBASIC4.76□□□□□ -1.65
COL8A1P27658 U2.6-201ENST00000619225 191 ntBASIC4.76□□□□□ -1.65
COL8A1P27658 U2.5-201ENST00000619465 191 ntBASIC4.76□□□□□ -1.65
COL8A1P27658 U2.10-201ENST00000620268 191 ntBASIC4.76□□□□□ -1.65
COL8A1P27658 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.76□□□□□ -1.65
COL8A1P27658 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.76□□□□□ -1.65
COL8A1P27658 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL8A1P27658 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
COL8A1P27658 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.76□□□□□ -1.65
COL8A1P27658 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC4.76□□□□□ -1.65
COL8A1P27658 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL8A1P27658 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.76□□□□□ -1.65
COL8A1P27658 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL8A1P27658 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
COL8A1P27658 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
COL8A1P27658 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL8A1P27658 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
COL8A1P27658 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
COL8A1P27658 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
COL8A1P27658 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.75□□□□□ -1.65
COL8A1P27658 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL8A1P27658 Y_RNA.182-201ENST00000363880 111 ntBASIC4.75□□□□□ -1.65
COL8A1P27658 RNU4-11P-201ENST00000365287 132 ntBASIC4.75□□□□□ -1.65
COL8A1P27658 RNU6-1144P-201ENST00000384247 104 ntBASIC4.75□□□□□ -1.65
COL8A1P27658 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC4.75□□□□□ -1.65
COL8A1P27658 AC015977.1-201ENST00000418887 292 ntBASIC4.75□□□□□ -1.65
COL8A1P27658 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC4.75□□□□□ -1.65
COL8A1P27658 GSTM5P1-201ENST00000434751 660 ntBASIC4.75□□□□□ -1.65
COL8A1P27658 HIGD1AP2-201ENST00000446367 280 ntBASIC4.75□□□□□ -1.65
COL8A1P27658 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.75□□□□□ -1.65
COL8A1P27658 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC4.75□□□□□ -1.65
COL8A1P27658 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC4.75□□□□□ -1.65
COL8A1P27658 RAC1P5-201ENST00000512182 576 ntBASIC4.75□□□□□ -1.65
COL8A1P27658 RNU6-168P-201ENST00000516189 101 ntBASIC4.75□□□□□ -1.65
COL8A1P27658 AC103783.1-201ENST00000520506 373 ntBASIC4.75□□□□□ -1.65
COL8A1P27658 ATP5F1P5-201ENST00000526403 760 ntBASIC4.75□□□□□ -1.65
COL8A1P27658 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.75□□□□□ -1.65
COL8A1P27658 AP006289.1-201ENST00000538089 277 ntBASIC4.75□□□□□ -1.65
COL8A1P27658 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.75□□□□□ -1.65
COL8A1P27658 RPL23AP87-202ENST00000573039 466 ntBASIC4.75□□□□□ -1.65
COL8A1P27658 MIR5582-201ENST00000579697 68 ntBASIC4.75□□□□□ -1.65
COL8A1P27658 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC4.75□□□□□ -1.65
COL8A1P27658 B3GNTL1P2-201ENST00000603673 288 ntBASIC4.75□□□□□ -1.65
COL8A1P27658 AL034351.1-201ENST00000605288 668 ntBASIC4.75□□□□□ -1.65
COL8A1P27658 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC4.75□□□□□ -1.65
COL8A1P27658 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL8A1P27658 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL8A1P27658 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL8A1P27658 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL8A1P27658 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.75□□□□□ -1.65
COL8A1P27658 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
COL8A1P27658 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
COL8A1P27658 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.75□□□□□ -1.65
COL8A1P27658 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
COL8A1P27658 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL8A1P27658 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC4.74□□□□□ -1.65
COL8A1P27658 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.74□□□□□ -1.65
COL8A1P27658 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
COL8A1P27658 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL8A1P27658 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL8A1P27658 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.74□□□□□ -1.65
COL8A1P27658 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL8A1P27658 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC4.74□□□□□ -1.65
COL8A1P27658 AL353796.1-201ENST00000561542 3241 ntBASIC4.74□□□□□ -1.65
COL8A1P27658 RN7SKP227-201ENST00000364445 330 ntBASIC4.74□□□□□ -1.65
COL8A1P27658 RNA5SP455-201ENST00000365190 119 ntBASIC4.74□□□□□ -1.65
COL8A1P27658 Y_RNA.542-201ENST00000384641 111 ntBASIC4.74□□□□□ -1.65
COL8A1P27658 MIR1193-201ENST00000408109 78 ntBASIC4.74□□□□□ -1.65
COL8A1P27658 RPL7AP73-201ENST00000413490 353 ntBASIC4.74□□□□□ -1.65
COL8A1P27658 AC063979.1-201ENST00000415539 377 ntBASIC4.74□□□□□ -1.65
COL8A1P27658 AC119751.6-201ENST00000416712 186 ntBASIC4.74□□□□□ -1.65
COL8A1P27658 AF186996.5-201ENST00000418098 904 ntBASIC4.74□□□□□ -1.65
COL8A1P27658 Z82188.1-201ENST00000436709 154 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms