Protein–RNA interactions for Protein: P25940

COL5A3, Collagen alpha-3(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3P25940 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.88□□□□□ -2.11
COL5A3P25940 AL354695.1-201ENST00000427935 228 ntBASIC1.88□□□□□ -2.11
COL5A3P25940 PSMA2P3-201ENST00000429685 675 ntBASIC1.88□□□□□ -2.11
COL5A3P25940 GXYLT1P1-201ENST00000446657 490 ntBASIC1.88□□□□□ -2.11
COL5A3P25940 AL096803.2-201ENST00000450032 677 ntBASIC1.88□□□□□ -2.11
COL5A3P25940 RBM43P1-201ENST00000476891 1081 ntBASIC1.88□□□□□ -2.11
COL5A3P25940 AC009901.1-201ENST00000506703 541 ntBASIC1.88□□□□□ -2.11
COL5A3P25940 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC1.88□□□□□ -2.11
COL5A3P25940 LTV1P1-201ENST00000510683 1237 ntBASIC1.88□□□□□ -2.11
COL5A3P25940 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC1.88□□□□□ -2.11
COL5A3P25940 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC1.88□□□□□ -2.11
COL5A3P25940 MTND2P26-201ENST00000528255 1029 ntBASIC1.88□□□□□ -2.11
COL5A3P25940 AC006518.2-201ENST00000542513 940 ntBASIC1.88□□□□□ -2.11
COL5A3P25940 AC008015.1-201ENST00000555505 465 ntBASIC1.88□□□□□ -2.11
COL5A3P25940 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC1.88□□□□□ -2.11
COL5A3P25940 MTATP6P2-201ENST00000603319 678 ntBASIC1.88□□□□□ -2.11
COL5A3P25940 SEPT7P9-203ENST00000604116 343 ntBASIC1.88□□□□□ -2.11
COL5A3P25940 AL009028.1-201ENST00000604895 802 ntBASIC1.88□□□□□ -2.11
COL5A3P25940 AC021851.1-201ENST00000608537 1082 ntBASIC1.88□□□□□ -2.11
COL5A3P25940 AF129408.1-201ENST00000608767 431 ntBASIC1.88□□□□□ -2.11
COL5A3P25940 AC096586.1-201ENST00000610267 561 ntBASIC1.88□□□□□ -2.11
COL5A3P25940 PVT1_3.1-201ENST00000620853 95 ntBASIC1.88□□□□□ -2.11
COL5A3P25940 U6.107-201ENST00000637108 79 ntBASIC1.88□□□□□ -2.11
COL5A3P25940 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
COL5A3P25940 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
COL5A3P25940 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.88□□□□□ -2.11
COL5A3P25940 HSPE1P11-201ENST00000339579 310 ntBASIC1.88□□□□□ -2.11
COL5A3P25940 SNORA51.2-201ENST00000364595 132 ntBASIC1.88□□□□□ -2.11
COL5A3P25940 AL355615.1-201ENST00000406187 641 ntBASIC1.88□□□□□ -2.11
COL5A3P25940 RNU6-77P-201ENST00000410554 91 ntBASIC1.88□□□□□ -2.11
COL5A3P25940 UBE2V1P11-201ENST00000411559 285 ntBASIC1.88□□□□□ -2.11
COL5A3P25940 AC069282.1-201ENST00000411911 526 ntBASIC1.88□□□□□ -2.11
COL5A3P25940 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC1.88□□□□□ -2.11
COL5A3P25940 AL606495.1-201ENST00000422100 813 ntBASIC1.88□□□□□ -2.11
COL5A3P25940 AC013262.1-201ENST00000426710 252 ntBASIC1.88□□□□□ -2.11
COL5A3P25940 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.88□□□□□ -2.11
COL5A3P25940 YWHAZP8-201ENST00000436935 731 ntBASIC1.88□□□□□ -2.11
COL5A3P25940 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC1.88□□□□□ -2.11
COL5A3P25940 AC092170.1-201ENST00000440211 356 ntBASIC1.88□□□□□ -2.11
COL5A3P25940 ATP5J2P3-201ENST00000451550 258 ntBASIC1.88□□□□□ -2.11
COL5A3P25940 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC1.88□□□□□ -2.11
COL5A3P25940 GTF2IP12-201ENST00000456547 356 ntBASIC1.88□□□□□ -2.11
COL5A3P25940 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.88□□□□□ -2.11
COL5A3P25940 AC104108.1-201ENST00000509930 412 ntBASIC1.88□□□□□ -2.11
COL5A3P25940 RPPH1-2P-201ENST00000516688 293 ntBASIC1.88□□□□□ -2.11
COL5A3P25940 AC010376.1-201ENST00000522101 334 ntBASIC1.88□□□□□ -2.11
COL5A3P25940 PSMA3P-201ENST00000555485 635 ntBASIC1.88□□□□□ -2.11
COL5A3P25940 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC1.88□□□□□ -2.11
COL5A3P25940 MIR4789-201ENST00000577469 82 ntBASIC1.88□□□□□ -2.11
COL5A3P25940 AC010928.2-201ENST00000588017 287 ntBASIC1.88□□□□□ -2.11
COL5A3P25940 AC133794.1-201ENST00000602731 914 ntBASIC1.88□□□□□ -2.11
COL5A3P25940 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.88□□□□□ -2.11
COL5A3P25940 AC018926.1-201ENST00000616335 435 ntBASIC1.88□□□□□ -2.11
COL5A3P25940 STMN1P1-201ENST00000617809 440 ntBASIC1.88□□□□□ -2.11
COL5A3P25940 SNHG22-203ENST00000617833 660 ntBASIC1.88□□□□□ -2.11
COL5A3P25940 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC1.88□□□□□ -2.11
COL5A3P25940 AL109659.3-201ENST00000624985 950 ntBASIC1.88□□□□□ -2.11
COL5A3P25940 AC132825.7-201ENST00000638744 335 ntBASIC1.88□□□□□ -2.11
COL5A3P25940 ZNF209P-201ENST00000593450 2304 ntBASIC1.88□□□□□ -2.11
COL5A3P25940 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
COL5A3P25940 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
COL5A3P25940 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
COL5A3P25940 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.87□□□□□ -2.11
COL5A3P25940 AC103710.2-202ENST00000641454 2853 ntBASIC1.87□□□□□ -2.11
COL5A3P25940 RNU6-1027P-201ENST00000383998 107 ntBASIC1.87□□□□□ -2.11
COL5A3P25940 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC1.87□□□□□ -2.11
COL5A3P25940 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC1.87□□□□□ -2.11
COL5A3P25940 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.87□□□□□ -2.11
COL5A3P25940 AC092634.2-201ENST00000428146 1010 ntBASIC1.87□□□□□ -2.11
COL5A3P25940 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC1.87□□□□□ -2.11
COL5A3P25940 HMGN2P16-201ENST00000456802 261 ntBASIC1.87□□□□□ -2.11
COL5A3P25940 AC034244.1-201ENST00000507687 207 ntBASIC1.87□□□□□ -2.11
COL5A3P25940 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC1.87□□□□□ -2.11
COL5A3P25940 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC1.87□□□□□ -2.11
COL5A3P25940 AC124293.1-201ENST00000530034 493 ntBASIC1.87□□□□□ -2.11
COL5A3P25940 CYB5AP5-201ENST00000549779 389 ntBASIC1.87□□□□□ -2.11
COL5A3P25940 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC1.87□□□□□ -2.11
COL5A3P25940 MTCO3P24-201ENST00000572729 782 ntBASIC1.87□□□□□ -2.11
COL5A3P25940 AP002906.1-201ENST00000603405 233 ntBASIC1.87□□□□□ -2.11
COL5A3P25940 BNIP3P31-201ENST00000604515 566 ntBASIC1.87□□□□□ -2.11
COL5A3P25940 ZNF33BP1-201ENST00000452497 1834 ntBASIC1.87□□□□□ -2.11
COL5A3P25940 AC008568.2-201ENST00000623862 2313 ntBASIC1.87□□□□□ -2.11
COL5A3P25940 ZNF734P-201ENST00000419494 1534 ntBASIC1.87□□□□□ -2.11
COL5A3P25940 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.86□□□□□ -2.11
COL5A3P25940 AC121333.1-201ENST00000567488 2709 ntBASIC1.86□□□□□ -2.11
COL5A3P25940 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.86□□□□□ -2.11
COL5A3P25940 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
COL5A3P25940 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
COL5A3P25940 ENSAP3-201ENST00000312710 333 ntBASIC1.86□□□□□ -2.11
COL5A3P25940 SNORA7.2-201ENST00000364446 145 ntBASIC1.86□□□□□ -2.11
COL5A3P25940 U6.112-201ENST00000384129 70 ntBASIC1.86□□□□□ -2.11
COL5A3P25940 RNU6-932P-201ENST00000391108 106 ntBASIC1.86□□□□□ -2.11
COL5A3P25940 AC092447.6-201ENST00000414578 210 ntBASIC1.86□□□□□ -2.11
COL5A3P25940 AC241520.1-201ENST00000422654 1099 ntBASIC1.86□□□□□ -2.11
COL5A3P25940 PNRC2P1-201ENST00000423940 420 ntBASIC1.86□□□□□ -2.11
COL5A3P25940 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC1.86□□□□□ -2.11
COL5A3P25940 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.86□□□□□ -2.11
COL5A3P25940 LAMTOR3P1-201ENST00000428620 370 ntBASIC1.86□□□□□ -2.11
COL5A3P25940 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC1.86□□□□□ -2.11
COL5A3P25940 RNF2P1-201ENST00000442955 1010 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms