Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.16□□□□□ -1.9
CDH3P22223 RPL30P14-201ENST00000482744 348 ntBASIC3.16□□□□□ -1.9
CDH3P22223 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CDH3P22223 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.16□□□□□ -1.9
CDH3P22223 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.16□□□□□ -1.9
CDH3P22223 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.16□□□□□ -1.9
CDH3P22223 CBX3P3-201ENST00000508108 532 ntBASIC3.16□□□□□ -1.9
CDH3P22223 AC109464.2-201ENST00000510242 943 ntBASIC3.16□□□□□ -1.9
CDH3P22223 MTCO3P28-201ENST00000513351 515 ntBASIC3.16□□□□□ -1.9
CDH3P22223 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.16□□□□□ -1.9
CDH3P22223 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.16□□□□□ -1.9
CDH3P22223 RN7SKP57-201ENST00000517248 293 ntBASIC3.16□□□□□ -1.9
CDH3P22223 AP001804.3-201ENST00000525146 880 ntBASIC3.16□□□□□ -1.9
CDH3P22223 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.16□□□□□ -1.9
CDH3P22223 DEFB108D-201ENST00000527787 222 ntBASIC3.16□□□□□ -1.9
CDH3P22223 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.16□□□□□ -1.9
CDH3P22223 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.16□□□□□ -1.9
CDH3P22223 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.16□□□□□ -1.9
CDH3P22223 AL133153.1-201ENST00000557756 303 ntBASIC3.16□□□□□ -1.9
CDH3P22223 MED28P6-201ENST00000558776 231 ntBASIC3.16□□□□□ -1.9
CDH3P22223 AL157394.1-201ENST00000562983 1224 ntBASIC3.16□□□□□ -1.9
CDH3P22223 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.16□□□□□ -1.9
CDH3P22223 AC009977.1-201ENST00000586015 570 ntBASIC3.16□□□□□ -1.9
CDH3P22223 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.16□□□□□ -1.9
CDH3P22223 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.16□□□□□ -1.9
CDH3P22223 AC068790.3-201ENST00000602988 553 ntBASIC3.16□□□□□ -1.9
CDH3P22223 AC064872.1-201ENST00000604823 1072 ntBASIC3.16□□□□□ -1.9
CDH3P22223 AC087752.4-201ENST00000605911 462 ntBASIC3.16□□□□□ -1.9
CDH3P22223 uc_338.1-201ENST00000612113 180 ntBASIC3.16□□□□□ -1.9
CDH3P22223 AL138880.2-201ENST00000616214 239 ntBASIC3.16□□□□□ -1.9
CDH3P22223 AC009509.4-201ENST00000619202 509 ntBASIC3.16□□□□□ -1.9
CDH3P22223 AC084035.1-201ENST00000634543 607 ntBASIC3.16□□□□□ -1.9
CDH3P22223 AC093831.2-201ENST00000624393 3427 ntBASIC3.16□□□□□ -1.9
CDH3P22223 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.16□□□□□ -1.9
CDH3P22223 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.15□□□□□ -1.9
CDH3P22223 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.15□□□□□ -1.9
CDH3P22223 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
CDH3P22223 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CDH3P22223 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.9
CDH3P22223 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.15□□□□□ -1.91
CDH3P22223 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CDH3P22223 RNU6-173P-201ENST00000364215 104 ntBASIC3.15□□□□□ -1.91
CDH3P22223 RNU6-297P-201ENST00000384636 107 ntBASIC3.15□□□□□ -1.91
CDH3P22223 SNORA1.3-201ENST00000384676 136 ntBASIC3.15□□□□□ -1.91
CDH3P22223 RPS4XP3-201ENST00000398541 413 ntBASIC3.15□□□□□ -1.91
CDH3P22223 RN7SKP58-201ENST00000411010 305 ntBASIC3.15□□□□□ -1.91
CDH3P22223 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.15□□□□□ -1.91
CDH3P22223 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.15□□□□□ -1.91
CDH3P22223 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.15□□□□□ -1.91
CDH3P22223 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.15□□□□□ -1.91
CDH3P22223 SNRPFP4-201ENST00000456366 242 ntBASIC3.15□□□□□ -1.91
CDH3P22223 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.15□□□□□ -1.91
CDH3P22223 RPL23AP41-201ENST00000484754 458 ntBASIC3.15□□□□□ -1.91
CDH3P22223 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.15□□□□□ -1.91
CDH3P22223 ARL4AP2-201ENST00000507378 601 ntBASIC3.15□□□□□ -1.91
CDH3P22223 AP003467.2-201ENST00000520175 319 ntBASIC3.15□□□□□ -1.91
CDH3P22223 AP003181.2-201ENST00000528941 181 ntBASIC3.15□□□□□ -1.91
CDH3P22223 AP000873.5-201ENST00000533906 236 ntBASIC3.15□□□□□ -1.91
CDH3P22223 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.15□□□□□ -1.91
CDH3P22223 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.15□□□□□ -1.91
CDH3P22223 AP005205.1-201ENST00000563503 508 ntBASIC3.15□□□□□ -1.91
CDH3P22223 AC006362.1-201ENST00000567392 174 ntBASIC3.15□□□□□ -1.91
CDH3P22223 AC010653.1-201ENST00000571108 881 ntBASIC3.15□□□□□ -1.91
CDH3P22223 ZNF415P1-201ENST00000582279 1166 ntBASIC3.15□□□□□ -1.91
CDH3P22223 AC005771.1-201ENST00000585581 349 ntBASIC3.15□□□□□ -1.91
CDH3P22223 HMGN1P30-201ENST00000589286 268 ntBASIC3.15□□□□□ -1.91
CDH3P22223 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.15□□□□□ -1.91
CDH3P22223 AC007038.2-201ENST00000608095 740 ntBASIC3.15□□□□□ -1.91
CDH3P22223 AC004067.1-201ENST00000608733 700 ntBASIC3.15□□□□□ -1.91
CDH3P22223 AL603758.1-201ENST00000618654 241 ntBASIC3.15□□□□□ -1.91
CDH3P22223 AC019226.1-201ENST00000625666 515 ntBASIC3.15□□□□□ -1.91
CDH3P22223 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
CDH3P22223 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.15□□□□□ -1.91
CDH3P22223 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.15□□□□□ -1.91
CDH3P22223 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CDH3P22223 AP003122.5-201ENST00000527668 3766 ntBASIC3.14□□□□□ -1.91
CDH3P22223 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CDH3P22223 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.14□□□□□ -1.91
CDH3P22223 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.14□□□□□ -1.91
CDH3P22223 RNU1-70P-201ENST00000362618 164 ntBASIC3.14□□□□□ -1.91
CDH3P22223 Y_RNA.318-201ENST00000365131 97 ntBASIC3.14□□□□□ -1.91
CDH3P22223 RNU6-76P-201ENST00000384060 104 ntBASIC3.14□□□□□ -1.91
CDH3P22223 SNORA75-201ENST00000384158 137 ntBASIC3.14□□□□□ -1.91
CDH3P22223 RNU6-432P-201ENST00000384196 109 ntBASIC3.14□□□□□ -1.91
CDH3P22223 SNORA40.3-201ENST00000390964 122 ntBASIC3.14□□□□□ -1.91
CDH3P22223 MIR1289-1-201ENST00000408836 144 ntBASIC3.14□□□□□ -1.91
CDH3P22223 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.14□□□□□ -1.91
CDH3P22223 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.14□□□□□ -1.91
CDH3P22223 MTCO2P34-201ENST00000421994 607 ntBASIC3.14□□□□□ -1.91
CDH3P22223 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.14□□□□□ -1.91
CDH3P22223 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.14□□□□□ -1.91
CDH3P22223 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.14□□□□□ -1.91
CDH3P22223 ATP5C1P1-201ENST00000441945 895 ntBASIC3.14□□□□□ -1.91
CDH3P22223 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.14□□□□□ -1.91
CDH3P22223 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.14□□□□□ -1.91
CDH3P22223 Z75741.1-201ENST00000446793 314 ntBASIC3.14□□□□□ -1.91
CDH3P22223 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.14□□□□□ -1.91
CDH3P22223 SNORD42A-201ENST00000459584 64 ntBASIC3.14□□□□□ -1.91
CDH3P22223 RN7SL75P-201ENST00000461926 281 ntBASIC3.14□□□□□ -1.91
CDH3P22223 MTND4P2-201ENST00000507767 1203 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms