Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 RNA5SP21-201ENST00000410917 96 ntBASIC2.7□□□□□ -1.98
XRCC1P18887 RNA5SP184-201ENST00000411071 108 ntBASIC2.7□□□□□ -1.98
XRCC1P18887 AL022400.1-201ENST00000423946 935 ntBASIC2.7□□□□□ -1.98
XRCC1P18887 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC2.7□□□□□ -1.98
XRCC1P18887 AC019097.1-201ENST00000424783 735 ntBASIC2.7□□□□□ -1.98
XRCC1P18887 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC2.7□□□□□ -1.98
XRCC1P18887 AC063976.3-201ENST00000426849 329 ntBASIC2.7□□□□□ -1.98
XRCC1P18887 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.7□□□□□ -1.98
XRCC1P18887 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.7□□□□□ -1.98
XRCC1P18887 Z96811.1-201ENST00000445880 108 ntBASIC2.7□□□□□ -1.98
XRCC1P18887 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.7□□□□□ -1.98
XRCC1P18887 ATG12P2-201ENST00000456830 416 ntBASIC2.7□□□□□ -1.98
XRCC1P18887 AP1S2P1-201ENST00000457344 379 ntBASIC2.7□□□□□ -1.98
XRCC1P18887 AC092798.1-201ENST00000458542 409 ntBASIC2.7□□□□□ -1.98
XRCC1P18887 AL049874.1-201ENST00000489560 388 ntBASIC2.7□□□□□ -1.98
XRCC1P18887 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.7□□□□□ -1.98
XRCC1P18887 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
XRCC1P18887 AC110760.3-202ENST00000515177 371 ntBASIC2.7□□□□□ -1.98
XRCC1P18887 RNU6-840P-201ENST00000517275 65 ntBASIC2.7□□□□□ -1.98
XRCC1P18887 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.7□□□□□ -1.98
XRCC1P18887 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC2.7□□□□□ -1.98
XRCC1P18887 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.7□□□□□ -1.98
XRCC1P18887 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2.7□□□□□ -1.98
XRCC1P18887 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.7□□□□□ -1.98
XRCC1P18887 GLUD1P4-201ENST00000590914 418 ntBASIC2.7□□□□□ -1.98
XRCC1P18887 AC234772.3-201ENST00000602277 528 ntBASIC2.7□□□□□ -1.98
XRCC1P18887 AL357094.1-201ENST00000603845 844 ntBASIC2.7□□□□□ -1.98
XRCC1P18887 AC013244.3-201ENST00000605614 388 ntBASIC2.7□□□□□ -1.98
XRCC1P18887 AC097468.3-201ENST00000607956 456 ntBASIC2.7□□□□□ -1.98
XRCC1P18887 AL139418.1-201ENST00000613613 177 ntBASIC2.7□□□□□ -1.98
XRCC1P18887 AP000676.3-201ENST00000623299 569 ntBASIC2.7□□□□□ -1.98
XRCC1P18887 AP003485.2-201ENST00000623636 610 ntBASIC2.7□□□□□ -1.98
XRCC1P18887 CR381653.2-201ENST00000624041 768 ntBASIC2.7□□□□□ -1.98
XRCC1P18887 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.7□□□□□ -1.98
XRCC1P18887 AC099063.3-201ENST00000642066 185 ntBASIC2.7□□□□□ -1.98
XRCC1P18887 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.7□□□□□ -1.98
XRCC1P18887 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.7□□□□□ -1.98
XRCC1P18887 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
XRCC1P18887 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.69□□□□□ -1.98
XRCC1P18887 AC022336.2-201ENST00000568966 2538 ntBASIC2.69□□□□□ -1.98
XRCC1P18887 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
XRCC1P18887 AC062016.1-201ENST00000355719 319 ntBASIC2.69□□□□□ -1.98
XRCC1P18887 MIR26A1-201ENST00000362205 77 ntBASIC2.69□□□□□ -1.98
XRCC1P18887 RNU1-109P-201ENST00000383960 147 ntBASIC2.69□□□□□ -1.98
XRCC1P18887 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
XRCC1P18887 RSL24D1P4-201ENST00000400938 484 ntBASIC2.69□□□□□ -1.98
XRCC1P18887 AL359704.1-201ENST00000411586 781 ntBASIC2.69□□□□□ -1.98
XRCC1P18887 SPA17P1-201ENST00000416656 452 ntBASIC2.69□□□□□ -1.98
XRCC1P18887 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.69□□□□□ -1.98
XRCC1P18887 AC236972.1-201ENST00000433225 199 ntBASIC2.69□□□□□ -1.98
XRCC1P18887 AL117351.1-201ENST00000438864 766 ntBASIC2.69□□□□□ -1.98
XRCC1P18887 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.69□□□□□ -1.98
XRCC1P18887 AP000705.1-201ENST00000454567 350 ntBASIC2.69□□□□□ -1.98
XRCC1P18887 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.69□□□□□ -1.98
XRCC1P18887 AC135721.1-201ENST00000497954 479 ntBASIC2.69□□□□□ -1.98
XRCC1P18887 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.69□□□□□ -1.98
XRCC1P18887 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.69□□□□□ -1.98
XRCC1P18887 CDC42P4-201ENST00000510507 563 ntBASIC2.69□□□□□ -1.98
XRCC1P18887 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.69□□□□□ -1.98
XRCC1P18887 AP003461.1-201ENST00000528866 78 ntBASIC2.69□□□□□ -1.98
XRCC1P18887 AC087276.1-201ENST00000529659 480 ntBASIC2.69□□□□□ -1.98
XRCC1P18887 AC004486.1-201ENST00000546846 233 ntBASIC2.69□□□□□ -1.98
XRCC1P18887 MTND1P24-201ENST00000552175 861 ntBASIC2.69□□□□□ -1.98
XRCC1P18887 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.69□□□□□ -1.98
XRCC1P18887 MIR3162-201ENST00000581818 82 ntBASIC2.69□□□□□ -1.98
XRCC1P18887 AC060771.1-201ENST00000582031 164 ntBASIC2.69□□□□□ -1.98
XRCC1P18887 MIR3605-201ENST00000583214 100 ntBASIC2.69□□□□□ -1.98
XRCC1P18887 VN1R90P-201ENST00000595717 726 ntBASIC2.69□□□□□ -1.98
XRCC1P18887 AC022022.2-201ENST00000602989 360 ntBASIC2.69□□□□□ -1.98
XRCC1P18887 RPL12P50-201ENST00000603116 116 ntBASIC2.69□□□□□ -1.98
XRCC1P18887 AC006023.1-201ENST00000603944 259 ntBASIC2.69□□□□□ -1.98
XRCC1P18887 AC013553.2-201ENST00000604244 589 ntBASIC2.69□□□□□ -1.98
XRCC1P18887 TUG1_2.1-201ENST00000614234 87 ntBASIC2.69□□□□□ -1.98
XRCC1P18887 AC007998.5-201ENST00000622938 237 ntBASIC2.69□□□□□ -1.98
XRCC1P18887 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
XRCC1P18887 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
XRCC1P18887 OR4G2P-202ENST00000641004 1759 ntBASIC2.69□□□□□ -1.98
XRCC1P18887 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
XRCC1P18887 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
XRCC1P18887 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.68□□□□□ -1.98
XRCC1P18887 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
XRCC1P18887 Y_RNA.18-201ENST00000362461 102 ntBASIC2.68□□□□□ -1.98
XRCC1P18887 RNY4P24-201ENST00000362735 96 ntBASIC2.68□□□□□ -1.98
XRCC1P18887 RNU6-433P-201ENST00000363216 104 ntBASIC2.68□□□□□ -1.98
XRCC1P18887 RNU6-799P-201ENST00000363567 107 ntBASIC2.68□□□□□ -1.98
XRCC1P18887 SNORA25.6-201ENST00000364121 118 ntBASIC2.68□□□□□ -1.98
XRCC1P18887 RNU6-1027P-201ENST00000383998 107 ntBASIC2.68□□□□□ -1.98
XRCC1P18887 Y_RNA.500-201ENST00000384466 111 ntBASIC2.68□□□□□ -1.98
XRCC1P18887 RNU6-253P-201ENST00000384730 105 ntBASIC2.68□□□□□ -1.98
XRCC1P18887 AL512633.1-201ENST00000399931 655 ntBASIC2.68□□□□□ -1.98
XRCC1P18887 TXNP7-201ENST00000406296 293 ntBASIC2.68□□□□□ -1.98
XRCC1P18887 AL592148.1-201ENST00000413568 445 ntBASIC2.68□□□□□ -1.98
XRCC1P18887 HIGD1AP15-201ENST00000416198 280 ntBASIC2.68□□□□□ -1.98
XRCC1P18887 NUP35P1-201ENST00000422734 947 ntBASIC2.68□□□□□ -1.98
XRCC1P18887 XKRYP1-201ENST00000423438 492 ntBASIC2.68□□□□□ -1.98
XRCC1P18887 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.68□□□□□ -1.98
XRCC1P18887 XKRYP2-201ENST00000432915 492 ntBASIC2.68□□□□□ -1.98
XRCC1P18887 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.68□□□□□ -1.98
XRCC1P18887 AL354941.1-201ENST00000438600 464 ntBASIC2.68□□□□□ -1.98
XRCC1P18887 FAM103A2P-201ENST00000444122 354 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms