Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC244033.1-201ENST00000426826 870 ntBASIC1.61□□□□□ -2.15
TOP2AP11388 ELOCP6-201ENST00000429066 328 ntBASIC1.61□□□□□ -2.15
TOP2AP11388 ELOCP12-201ENST00000458706 328 ntBASIC1.61□□□□□ -2.15
TOP2AP11388 AC025768.1-201ENST00000510057 267 ntBASIC1.61□□□□□ -2.15
TOP2AP11388 CBX3P8-201ENST00000532412 525 ntBASIC1.61□□□□□ -2.15
TOP2AP11388 CBX3P7-201ENST00000532876 502 ntBASIC1.61□□□□□ -2.15
TOP2AP11388 AC112191.3-201ENST00000604371 277 ntBASIC1.61□□□□□ -2.15
TOP2AP11388 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
TOP2AP11388 TEX21P-201ENST00000447107 1476 ntBASIC1.61□□□□□ -2.15
TOP2AP11388 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
TOP2AP11388 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.61□□□□□ -2.15
TOP2AP11388 OR6C66P-201ENST00000414917 930 ntBASIC1.61□□□□□ -2.15
TOP2AP11388 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC1.61□□□□□ -2.15
TOP2AP11388 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.61□□□□□ -2.15
TOP2AP11388 HSPE1P4-201ENST00000550617 308 ntBASIC1.61□□□□□ -2.15
TOP2AP11388 RPL21P5-201ENST00000554662 472 ntBASIC1.61□□□□□ -2.15
TOP2AP11388 AC004908.2-201ENST00000609090 574 ntBASIC1.61□□□□□ -2.15
TOP2AP11388 DDX43P2-201ENST00000604753 1354 ntBASIC1.6□□□□□ -2.15
TOP2AP11388 AC004941.2-201ENST00000427009 228 ntBASIC1.6□□□□□ -2.15
TOP2AP11388 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
TOP2AP11388 AL357134.1-201ENST00000445848 426 ntBASIC1.6□□□□□ -2.15
TOP2AP11388 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.6□□□□□ -2.15
TOP2AP11388 AC010683.1-201ENST00000473673 378 ntBASIC1.6□□□□□ -2.15
TOP2AP11388 MRPS33P3-201ENST00000513456 322 ntBASIC1.6□□□□□ -2.15
TOP2AP11388 MIR4698-201ENST00000577795 80 ntBASIC1.6□□□□□ -2.15
TOP2AP11388 RN7SL793P-201ENST00000583259 296 ntBASIC1.6□□□□□ -2.15
TOP2AP11388 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.6□□□□□ -2.15
TOP2AP11388 DDX10P1-201ENST00000448545 1933 ntBASIC1.59□□□□□ -2.16
TOP2AP11388 Y_RNA.393-201ENST00000383936 102 ntBASIC1.59□□□□□ -2.16
TOP2AP11388 AC068050.1-201ENST00000394891 380 ntBASIC1.59□□□□□ -2.16
TOP2AP11388 Z86062.1-201ENST00000406773 777 ntBASIC1.59□□□□□ -2.16
TOP2AP11388 RNU2-32P-201ENST00000411193 191 ntBASIC1.59□□□□□ -2.16
TOP2AP11388 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.59□□□□□ -2.16
TOP2AP11388 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.59□□□□□ -2.16
TOP2AP11388 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
TOP2AP11388 SNORD14B-201ENST00000364533 90 ntBASIC1.58□□□□□ -2.16
TOP2AP11388 SNORD23.1-201ENST00000408212 104 ntBASIC1.58□□□□□ -2.16
TOP2AP11388 CYCSP48-201ENST00000417124 323 ntBASIC1.58□□□□□ -2.16
TOP2AP11388 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC1.58□□□□□ -2.16
TOP2AP11388 AC092648.1-201ENST00000425870 423 ntBASIC1.58□□□□□ -2.16
TOP2AP11388 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.58□□□□□ -2.16
TOP2AP11388 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.58□□□□□ -2.16
TOP2AP11388 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
TOP2AP11388 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
TOP2AP11388 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC1.58□□□□□ -2.16
TOP2AP11388 AC095038.3-201ENST00000634439 195 ntBASIC1.58□□□□□ -2.16
TOP2AP11388 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
TOP2AP11388 RNU4-42P-201ENST00000364738 142 ntBASIC1.57□□□□□ -2.16
TOP2AP11388 MIR150-201ENST00000385048 84 ntBASIC1.57□□□□□ -2.16
TOP2AP11388 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.57□□□□□ -2.16
TOP2AP11388 AL135752.1-201ENST00000479477 471 ntBASIC1.57□□□□□ -2.16
TOP2AP11388 AC096745.1-201ENST00000509945 370 ntBASIC1.57□□□□□ -2.16
TOP2AP11388 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.57□□□□□ -2.16
TOP2AP11388 RN7SKP179-201ENST00000516126 217 ntBASIC1.57□□□□□ -2.16
TOP2AP11388 DEFB108E-201ENST00000524692 240 ntBASIC1.57□□□□□ -2.16
TOP2AP11388 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
TOP2AP11388 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.57□□□□□ -2.16
TOP2AP11388 AC023825.1-201ENST00000566704 1030 ntBASIC1.57□□□□□ -2.16
TOP2AP11388 AC103810.9-201ENST00000606688 112 ntBASIC1.57□□□□□ -2.16
TOP2AP11388 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC1.57□□□□□ -2.16
TOP2AP11388 AC092745.2-202ENST00000411880 369 ntBASIC1.56□□□□□ -2.16
TOP2AP11388 HSPE1P24-201ENST00000450782 238 ntBASIC1.56□□□□□ -2.16
TOP2AP11388 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.56□□□□□ -2.16
TOP2AP11388 RNY1P4-201ENST00000384595 115 ntBASIC1.56□□□□□ -2.16
TOP2AP11388 RPL30P3-201ENST00000424262 333 ntBASIC1.56□□□□□ -2.16
TOP2AP11388 RPS29P28-201ENST00000446439 141 ntBASIC1.56□□□□□ -2.16
TOP2AP11388 AC004022.1-201ENST00000447766 1066 ntBASIC1.56□□□□□ -2.16
TOP2AP11388 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.56□□□□□ -2.16
TOP2AP11388 RNU6-1132P-201ENST00000459214 107 ntBASIC1.56□□□□□ -2.16
TOP2AP11388 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.56□□□□□ -2.16
TOP2AP11388 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.56□□□□□ -2.16
TOP2AP11388 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC1.56□□□□□ -2.16
TOP2AP11388 HMGB1P24-202ENST00000615653 685 ntBASIC1.56□□□□□ -2.16
TOP2AP11388 uc_338.9-201ENST00000617424 182 ntBASIC1.56□□□□□ -2.16
TOP2AP11388 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.55□□□□□ -2.16
TOP2AP11388 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
TOP2AP11388 Y_RNA.295-201ENST00000364918 102 ntBASIC1.55□□□□□ -2.16
TOP2AP11388 AC022662.1-201ENST00000580252 331 ntBASIC1.55□□□□□ -2.16
TOP2AP11388 AL512605.2-201ENST00000592972 256 ntBASIC1.55□□□□□ -2.16
TOP2AP11388 AL020996.3-201ENST00000606617 222 ntBASIC1.55□□□□□ -2.16
TOP2AP11388 AL627230.6-201ENST00000611129 280 ntBASIC1.55□□□□□ -2.16
TOP2AP11388 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC1.54□□□□□ -2.16
TOP2AP11388 RPL30P4-201ENST00000429309 333 ntBASIC1.54□□□□□ -2.16
TOP2AP11388 AL445305.1-201ENST00000432577 575 ntBASIC1.54□□□□□ -2.16
TOP2AP11388 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.54□□□□□ -2.16
TOP2AP11388 HMGN2P10-201ENST00000448085 265 ntBASIC1.54□□□□□ -2.16
TOP2AP11388 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.54□□□□□ -2.16
TOP2AP11388 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.54□□□□□ -2.16
TOP2AP11388 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC1.54□□□□□ -2.16
TOP2AP11388 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.54□□□□□ -2.16
TOP2AP11388 AC009220.3-201ENST00000604318 586 ntBASIC1.54□□□□□ -2.16
TOP2AP11388 AC012443.1-201ENST00000605605 231 ntBASIC1.54□□□□□ -2.16
TOP2AP11388 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.54□□□□□ -2.16
TOP2AP11388 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
TOP2AP11388 SDR42E1P2-201ENST00000614861 481 ntBASIC1.54□□□□□ -2.16
TOP2AP11388 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
TOP2AP11388 SDR42E1P4-201ENST00000620894 481 ntBASIC1.54□□□□□ -2.16
TOP2AP11388 RNU6-1105P-201ENST00000384774 107 ntBASIC1.53□□□□□ -2.16
TOP2AP11388 AC004022.2-201ENST00000413824 193 ntBASIC1.53□□□□□ -2.16
TOP2AP11388 AL583843.1-201ENST00000456070 346 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms