Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 RNU6-217P-201ENST00000384164 104 ntBASIC1.98□□□□□ -2.09
CD28P10747 RNU6-1316P-201ENST00000384242 108 ntBASIC1.98□□□□□ -2.09
CD28P10747 AL356421.1-201ENST00000403255 413 ntBASIC1.98□□□□□ -2.09
CD28P10747 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.98□□□□□ -2.09
CD28P10747 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.98□□□□□ -2.09
CD28P10747 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.98□□□□□ -2.09
CD28P10747 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.98□□□□□ -2.09
CD28P10747 TXNL1P1-201ENST00000429528 554 ntBASIC1.98□□□□□ -2.09
CD28P10747 EEF1E1P1-201ENST00000446998 430 ntBASIC1.98□□□□□ -2.09
CD28P10747 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.98□□□□□ -2.09
CD28P10747 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.98□□□□□ -2.09
CD28P10747 AC092798.1-201ENST00000458542 409 ntBASIC1.98□□□□□ -2.09
CD28P10747 snoU13.28-201ENST00000459235 104 ntBASIC1.98□□□□□ -2.09
CD28P10747 AC005410.1-202ENST00000460347 485 ntBASIC1.98□□□□□ -2.09
CD28P10747 AC103975.1-201ENST00000482506 483 ntBASIC1.98□□□□□ -2.09
CD28P10747 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC1.98□□□□□ -2.09
CD28P10747 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC1.98□□□□□ -2.09
CD28P10747 AIG1P1-201ENST00000503376 148 ntBASIC1.98□□□□□ -2.09
CD28P10747 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC1.98□□□□□ -2.09
CD28P10747 MTND3P3-201ENST00000505004 126 ntBASIC1.98□□□□□ -2.09
CD28P10747 ANXA2P1-201ENST00000505539 926 ntBASIC1.98□□□□□ -2.09
CD28P10747 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.98□□□□□ -2.09
CD28P10747 AC116353.3-201ENST00000511215 249 ntBASIC1.98□□□□□ -2.09
CD28P10747 RAC1P5-201ENST00000512182 576 ntBASIC1.98□□□□□ -2.09
CD28P10747 RNA5SP24-201ENST00000516478 95 ntBASIC1.98□□□□□ -2.09
CD28P10747 AC109329.2-201ENST00000519658 482 ntBASIC1.98□□□□□ -2.09
CD28P10747 AP003122.3-201ENST00000526316 255 ntBASIC1.98□□□□□ -2.09
CD28P10747 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.98□□□□□ -2.09
CD28P10747 ERP27-202ENST00000540097 993 ntTSL 2 BASIC1.98□□□□□ -2.09
CD28P10747 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC1.98□□□□□ -2.09
CD28P10747 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC1.98□□□□□ -2.09
CD28P10747 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.98□□□□□ -2.09
CD28P10747 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.98□□□□□ -2.09
CD28P10747 MTCYBP23-201ENST00000558717 1102 ntBASIC1.98□□□□□ -2.09
CD28P10747 AC068135.2-201ENST00000569293 1028 ntBASIC1.98□□□□□ -2.09
CD28P10747 RPL23AP84-201ENST00000571193 464 ntBASIC1.98□□□□□ -2.09
CD28P10747 AC005951.2-201ENST00000576282 495 ntBASIC1.98□□□□□ -2.09
CD28P10747 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC1.98□□□□□ -2.09
CD28P10747 AC022662.1-201ENST00000580252 331 ntBASIC1.98□□□□□ -2.09
CD28P10747 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC1.98□□□□□ -2.09
CD28P10747 UBE2L4-201ENST00000587688 464 ntBASIC1.98□□□□□ -2.09
CD28P10747 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.98□□□□□ -2.09
CD28P10747 AC010620.2-201ENST00000600135 313 ntBASIC1.98□□□□□ -2.09
CD28P10747 AL161729.4-201ENST00000604650 476 ntBASIC1.98□□□□□ -2.09
CD28P10747 AC112220.3-201ENST00000605502 502 ntBASIC1.98□□□□□ -2.09
CD28P10747 AC087241.4-201ENST00000612441 480 ntBASIC1.98□□□□□ -2.09
CD28P10747 MIR6715A-201ENST00000615929 79 ntBASIC1.98□□□□□ -2.09
CD28P10747 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.98□□□□□ -2.09
CD28P10747 AC022306.3-201ENST00000619930 550 ntBASIC1.98□□□□□ -2.09
CD28P10747 U4.3-201ENST00000621047 82 ntBASIC1.98□□□□□ -2.09
CD28P10747 AL158801.5-201ENST00000623123 465 ntBASIC1.98□□□□□ -2.09
CD28P10747 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC1.98□□□□□ -2.09
CD28P10747 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
CD28P10747 AL138713.1-201ENST00000624026 2130 ntBASIC1.98□□□□□ -2.09
CD28P10747 AP000776.1-201ENST00000530032 1663 ntBASIC1.98□□□□□ -2.09
CD28P10747 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC1.98□□□□□ -2.09
CD28P10747 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC1.97□□□□□ -2.09
CD28P10747 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC1.97□□□□□ -2.09
CD28P10747 RNU4-68P-201ENST00000364314 141 ntBASIC1.97□□□□□ -2.09
CD28P10747 SNORA23-201ENST00000365128 182 ntBASIC1.97□□□□□ -2.09
CD28P10747 SNORD21-201ENST00000383953 95 ntBASIC1.97□□□□□ -2.09
CD28P10747 SNORA70B-201ENST00000384210 135 ntBASIC1.97□□□□□ -2.09
CD28P10747 RNU6-114P-201ENST00000384704 105 ntBASIC1.97□□□□□ -2.09
CD28P10747 MIR325-201ENST00000385260 98 ntBASIC1.97□□□□□ -2.09
CD28P10747 RNA5SP210-201ENST00000391034 120 ntBASIC1.97□□□□□ -2.09
CD28P10747 AL109755.1-201ENST00000401791 649 ntBASIC1.97□□□□□ -2.09
CD28P10747 AL356057.2-201ENST00000403318 432 ntBASIC1.97□□□□□ -2.09
CD28P10747 RPS4XP7-201ENST00000406274 780 ntBASIC1.97□□□□□ -2.09
CD28P10747 RN7SKP266-201ENST00000410232 287 ntBASIC1.97□□□□□ -2.09
CD28P10747 RNU2-33P-201ENST00000410344 192 ntBASIC1.97□□□□□ -2.09
CD28P10747 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CD28P10747 ELOCP9-201ENST00000418624 239 ntBASIC1.97□□□□□ -2.09
CD28P10747 AC099548.1-201ENST00000421443 426 ntBASIC1.97□□□□□ -2.09
CD28P10747 AC008850.1-201ENST00000427546 362 ntBASIC1.97□□□□□ -2.09
CD28P10747 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.97□□□□□ -2.09
CD28P10747 WASF1P1-201ENST00000447560 1131 ntBASIC1.97□□□□□ -2.09
CD28P10747 MTCO1P27-201ENST00000448269 226 ntBASIC1.97□□□□□ -2.09
CD28P10747 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC1.97□□□□□ -2.09
CD28P10747 AC104090.1-201ENST00000506341 1171 ntBASIC1.97□□□□□ -2.09
CD28P10747 AC022447.3-201ENST00000506865 495 ntBASIC1.97□□□□□ -2.09
CD28P10747 MTND5P4-201ENST00000514978 288 ntBASIC1.97□□□□□ -2.09
CD28P10747 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC1.97□□□□□ -2.09
CD28P10747 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.97□□□□□ -2.09
CD28P10747 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.97□□□□□ -2.09
CD28P10747 AP002748.2-201ENST00000528671 348 ntBASIC1.97□□□□□ -2.09
CD28P10747 AL355836.1-201ENST00000555951 870 ntBASIC1.97□□□□□ -2.09
CD28P10747 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
CD28P10747 AC104984.5-201ENST00000586878 94 ntBASIC1.97□□□□□ -2.09
CD28P10747 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.97□□□□□ -2.09
CD28P10747 AC008739.2-201ENST00000597006 317 ntBASIC1.97□□□□□ -2.09
CD28P10747 RPL23AP78-201ENST00000599928 470 ntBASIC1.97□□□□□ -2.09
CD28P10747 AL596327.1-201ENST00000603629 213 ntBASIC1.97□□□□□ -2.09
CD28P10747 AC006270.3-201ENST00000605967 1036 ntBASIC1.97□□□□□ -2.09
CD28P10747 RNU4-5P-201ENST00000607255 135 ntBASIC1.97□□□□□ -2.09
CD28P10747 AL391834.2-201ENST00000609982 546 ntBASIC1.97□□□□□ -2.09
CD28P10747 BX664608.1-201ENST00000610519 487 ntBASIC1.97□□□□□ -2.09
CD28P10747 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
CD28P10747 AC093838.1-201ENST00000613014 469 ntBASIC1.97□□□□□ -2.09
CD28P10747 AL161629.2-201ENST00000615347 275 ntBASIC1.97□□□□□ -2.09
CD28P10747 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms