| GLI3 | P10071 | AC068944.2-201 | ENST00000610373 | 403 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| GLI3 | P10071 | LUZP4-201 | ENST00000371920 | 1701 nt | APPRIS P2 TSL 1 (best) BASIC | 1.96 | □□□□□ -2.1 | | |
| GLI3 | P10071 | AC135776.4-201 | ENST00000624300 | 1904 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| GLI3 | P10071 | DSTNP4-201 | ENST00000399472 | 474 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| GLI3 | P10071 | ERHP2-201 | ENST00000402323 | 299 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| GLI3 | P10071 | RNU6-272P-201 | ENST00000411028 | 104 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| GLI3 | P10071 | DPYD-AS2-201 | ENST00000422259 | 788 nt | TSL 3 BASIC | 1.95 | □□□□□ -2.1 | | |
| GLI3 | P10071 | ZNF965P-201 | ENST00000432501 | 817 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| GLI3 | P10071 | ZMYM4-AS1-201 | ENST00000432683 | 459 nt | TSL 2 BASIC | 1.95 | □□□□□ -2.1 | | |
| GLI3 | P10071 | AC009158.1-207 | ENST00000432973 | 394 nt | TSL 5 BASIC | 1.95 | □□□□□ -2.1 | | |
| GLI3 | P10071 | RABEPKP1-201 | ENST00000440529 | 1026 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| GLI3 | P10071 | COX6CP14-201 | ENST00000469580 | 174 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| GLI3 | P10071 | OR9N1P-202 | ENST00000494289 | 481 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| GLI3 | P10071 | LINC02270-201 | ENST00000505386 | 610 nt | TSL 1 (best) BASIC | 1.95 | □□□□□ -2.1 | | |
| GLI3 | P10071 | SNORA31.8-201 | ENST00000516327 | 108 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| GLI3 | P10071 | RNA5SP471-201 | ENST00000516971 | 106 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| GLI3 | P10071 | AL049869.2-201 | ENST00000556634 | 365 nt | TSL 2 BASIC | 1.95 | □□□□□ -2.1 | | |
| GLI3 | P10071 | NUTF2P8-201 | ENST00000604593 | 363 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| GLI3 | P10071 | AC083806.3-201 | ENST00000614016 | 455 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| GLI3 | P10071 | AC006963.1-201 | ENST00000624003 | 1052 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| GLI3 | P10071 | LINC01790-201 | ENST00000447194 | 2852 nt | TSL 2 BASIC | 1.95 | □□□□□ -2.1 | | |
| GLI3 | P10071 | EYS-202 | ENST00000342421 | 2168 nt | TSL 1 (best) BASIC | 1.95 | □□□□□ -2.1 | | |
| GLI3 | P10071 | PTPRQ-208 | ENST00000614701 | 8289 nt | APPRIS P1 TSL 5 BASIC | 1.94 | □□□□□ -2.1 | | |
| GLI3 | P10071 | STATH-201 | ENST00000246895 | 598 nt | APPRIS P1 TSL 1 (best) BASIC | 1.94 | □□□□□ -2.1 | | |
| GLI3 | P10071 | AC016716.1-201 | ENST00000265882 | 708 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| GLI3 | P10071 | RNU6-40P-201 | ENST00000384254 | 107 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| GLI3 | P10071 | RNU6-837P-201 | ENST00000391056 | 108 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| GLI3 | P10071 | AC096533.1-201 | ENST00000411645 | 353 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| GLI3 | P10071 | RBM43P1-201 | ENST00000476891 | 1081 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| GLI3 | P10071 | VCAN-AS1-202 | ENST00000513899 | 453 nt | TSL 3 BASIC | 1.94 | □□□□□ -2.1 | | |
| GLI3 | P10071 | RNU6-488P-201 | ENST00000515918 | 99 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| GLI3 | P10071 | PLCZ1-203 | ENST00000534932 | 525 nt | TSL 4 BASIC | 1.94 | □□□□□ -2.1 | | |
| GLI3 | P10071 | AC092470.1-201 | ENST00000546187 | 132 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| GLI3 | P10071 | AL139021.2-201 | ENST00000556390 | 399 nt | TSL 3 BASIC | 1.94 | □□□□□ -2.1 | | |
| GLI3 | P10071 | AC025918.2-201 | ENST00000558683 | 763 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| GLI3 | P10071 | MIR3660-201 | ENST00000584845 | 100 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| GLI3 | P10071 | AC021851.1-201 | ENST00000608537 | 1082 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| GLI3 | P10071 | AC110491.2-201 | ENST00000624061 | 646 nt | TSL 5 BASIC | 1.94 | □□□□□ -2.1 | | |
| GLI3 | P10071 | C8orf89-202 | ENST00000624510 | 658 nt | APPRIS P2 TSL 3 BASIC | 1.94 | □□□□□ -2.1 | | |
| GLI3 | P10071 | AL109659.3-201 | ENST00000624985 | 950 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| GLI3 | P10071 | AC017104.5-201 | ENST00000637647 | 639 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| GLI3 | P10071 | BRDT-206 | ENST00000402388 | 3125 nt | APPRIS P3 TSL 1 (best) BASIC | 1.94 | □□□□□ -2.1 | | |
| GLI3 | P10071 | AC099654.7-201 | ENST00000635788 | 2127 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| GLI3 | P10071 | AC007342.9-201 | ENST00000623877 | 1385 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| GLI3 | P10071 | CEP83-202 | ENST00000397807 | 2737 nt | TSL 5 BASIC | 1.94 | □□□□□ -2.1 | | |
| GLI3 | P10071 | RNU6-543P-201 | ENST00000362576 | 108 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| GLI3 | P10071 | MT-TC-201 | ENST00000387405 | 66 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| GLI3 | P10071 | MIR548J-201 | ENST00000408833 | 112 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| GLI3 | P10071 | RNU4-78P-201 | ENST00000410940 | 126 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| GLI3 | P10071 | HMGB3P31-201 | ENST00000413333 | 595 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| GLI3 | P10071 | AL590623.1-201 | ENST00000427864 | 105 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| GLI3 | P10071 | GSAP-208 | ENST00000441833 | 737 nt | TSL 1 (best) BASIC | 1.93 | □□□□□ -2.1 | | |
| GLI3 | P10071 | CALM1P1-201 | ENST00000442082 | 433 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| GLI3 | P10071 | ZNF736P6Y-201 | ENST00000447526 | 1213 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| GLI3 | P10071 | AL592161.1-201 | ENST00000456389 | 861 nt | TSL 3 BASIC | 1.93 | □□□□□ -2.1 | | |
| GLI3 | P10071 | snoU109.4-201 | ENST00000458953 | 143 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| GLI3 | P10071 | AC107463.1-203 | ENST00000509713 | 284 nt | TSL 5 BASIC | 1.93 | □□□□□ -2.1 | | |
| GLI3 | P10071 | AC109927.1-202 | ENST00000511951 | 282 nt | TSL 3 BASIC | 1.93 | □□□□□ -2.1 | | |
| GLI3 | P10071 | LINC02382-201 | ENST00000515840 | 614 nt | TSL 1 (best) BASIC | 1.93 | □□□□□ -2.1 | | |
| GLI3 | P10071 | SMILR-201 | ENST00000533992 | 553 nt | TSL 4 BASIC | 1.93 | □□□□□ -2.1 | | |
| GLI3 | P10071 | AC121758.2-201 | ENST00000553271 | 193 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| GLI3 | P10071 | AL133279.2-201 | ENST00000556546 | 428 nt | TSL 3 BASIC | 1.93 | □□□□□ -2.1 | | |
| GLI3 | P10071 | ADAM3B-201 | ENST00000569937 | 840 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| GLI3 | P10071 | AP001021.1-201 | ENST00000577704 | 244 nt | TSL 3 BASIC | 1.93 | □□□□□ -2.1 | | |
| GLI3 | P10071 | FAM106DP-201 | ENST00000586416 | 501 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| GLI3 | P10071 | AC242426.3-203 | ENST00000606757 | 712 nt | TSL 3 BASIC | 1.93 | □□□□□ -2.1 | | |
| GLI3 | P10071 | AL355810.1-201 | ENST00000614629 | 552 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| GLI3 | P10071 | STATH-208 | ENST00000615994 | 598 nt | APPRIS P1 TSL 1 (best) BASIC | 1.93 | □□□□□ -2.1 | | |
| GLI3 | P10071 | AC068620.4-201 | ENST00000636730 | 1182 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| GLI3 | P10071 | CCDC68-201 | ENST00000337363 | 1457 nt | APPRIS P1 TSL 2 BASIC | 1.93 | □□□□□ -2.1 | | |
| GLI3 | P10071 | MLIP-AS1-201 | ENST00000434196 | 1534 nt | TSL 2 BASIC | 1.93 | □□□□□ -2.1 | | |
| GLI3 | P10071 | RNU6-1249P-201 | ENST00000363237 | 111 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| GLI3 | P10071 | SNORD114-27-201 | ENST00000363766 | 70 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| GLI3 | P10071 | RNU6-1226P-201 | ENST00000384317 | 107 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| GLI3 | P10071 | ZNF92P1Y-201 | ENST00000415010 | 1191 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| GLI3 | P10071 | Z85995.1-201 | ENST00000415547 | 335 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| GLI3 | P10071 | AL606495.1-201 | ENST00000422100 | 813 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| GLI3 | P10071 | AL034418.1-201 | ENST00000448675 | 860 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| GLI3 | P10071 | AC234775.1-201 | ENST00000454247 | 670 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| GLI3 | P10071 | LINC00374-201 | ENST00000454780 | 800 nt | TSL 3 BASIC | 1.93 | □□□□□ -2.1 | | |
| GLI3 | P10071 | RPS15AP34-201 | ENST00000487776 | 387 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| GLI3 | P10071 | CDC42P4-201 | ENST00000510507 | 563 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| GLI3 | P10071 | OR4R1P-201 | ENST00000529879 | 463 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| GLI3 | P10071 | GLUD1P4-201 | ENST00000590914 | 418 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| GLI3 | P10071 | AC008739.2-201 | ENST00000597006 | 317 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| GLI3 | P10071 | AL391646.1-201 | ENST00000603860 | 190 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| GLI3 | P10071 | AC012493.3-201 | ENST00000604494 | 112 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| GLI3 | P10071 | DPRXP5-201 | ENST00000604662 | 539 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| GLI3 | P10071 | AC004775.1-201 | ENST00000607389 | 753 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| GLI3 | P10071 | NEAT1-205 | ENST00000616315 | 483 nt | TSL 2 BASIC | 1.93 | □□□□□ -2.1 | | |
| GLI3 | P10071 | AC018926.3-201 | ENST00000618841 | 406 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| GLI3 | P10071 | KBTBD2-208 | ENST00000621876 | 1196 nt | TSL 5 BASIC | 1.93 | □□□□□ -2.1 | | |
| GLI3 | P10071 | MAPK10-266 | ENST00000641066 | 6555 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| GLI3 | P10071 | AC121333.1-201 | ENST00000567488 | 2709 nt | BASIC | 1.92 | □□□□□ -2.1 | | |
| GLI3 | P10071 | TEX15-203 | ENST00000638951 | 11341 nt | APPRIS P1 TSL 5 BASIC | 1.92 | □□□□□ -2.1 | | |
| GLI3 | P10071 | DDX10P1-201 | ENST00000448545 | 1933 nt | BASIC | 1.92 | □□□□□ -2.1 | | |
| GLI3 | P10071 | RPL39-201 | ENST00000361575 | 401 nt | APPRIS P1 TSL 1 (best) BASIC | 1.92 | □□□□□ -2.1 | | |
| GLI3 | P10071 | UBE2V1P9-201 | ENST00000414760 | 368 nt | BASIC | 1.92 | □□□□□ -2.1 | | |
| GLI3 | P10071 | HMGN2P19-201 | ENST00000425149 | 265 nt | BASIC | 1.92 | □□□□□ -2.1 | | |
| GLI3 | P10071 | AC092839.2-201 | ENST00000431130 | 377 nt | TSL 3 BASIC | 1.92 | □□□□□ -2.1 | | |