Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AL451062.2-201ENST00000427515 271 ntBASIC1.43□□□□□ -2.18
CXCL1P09341 PSMA6P3-201ENST00000428242 164 ntBASIC1.43□□□□□ -2.18
CXCL1P09341 AC241584.1-201ENST00000438469 1241 ntBASIC1.43□□□□□ -2.18
CXCL1P09341 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.43□□□□□ -2.18
CXCL1P09341 RPL7P12-201ENST00000446719 750 ntBASIC1.43□□□□□ -2.18
CXCL1P09341 AC096576.1-201ENST00000489014 359 ntBASIC1.43□□□□□ -2.18
CXCL1P09341 AC105252.1-201ENST00000503089 286 ntBASIC1.43□□□□□ -2.18
CXCL1P09341 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.43□□□□□ -2.18
CXCL1P09341 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.43□□□□□ -2.18
CXCL1P09341 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.43□□□□□ -2.18
CXCL1P09341 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC1.43□□□□□ -2.18
CXCL1P09341 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
CXCL1P09341 AC007375.1-201ENST00000554513 578 ntBASIC1.43□□□□□ -2.18
CXCL1P09341 CYCSP2-201ENST00000558168 301 ntBASIC1.43□□□□□ -2.18
CXCL1P09341 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC1.43□□□□□ -2.18
CXCL1P09341 MIR4419B-201ENST00000577260 68 ntBASIC1.43□□□□□ -2.18
CXCL1P09341 MIR4529-201ENST00000578110 78 ntBASIC1.43□□□□□ -2.18
CXCL1P09341 AC022662.1-201ENST00000580252 331 ntBASIC1.43□□□□□ -2.18
CXCL1P09341 MIR3162-201ENST00000581818 82 ntBASIC1.43□□□□□ -2.18
CXCL1P09341 AC239803.2-201ENST00000610161 430 ntBASIC1.43□□□□□ -2.18
CXCL1P09341 AL163051.2-201ENST00000618976 735 ntBASIC1.43□□□□□ -2.18
CXCL1P09341 MIR6873-201ENST00000622788 63 ntBASIC1.43□□□□□ -2.18
CXCL1P09341 AP001002.2-201ENST00000625137 386 ntBASIC1.43□□□□□ -2.18
CXCL1P09341 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.43□□□□□ -2.18
CXCL1P09341 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
CXCL1P09341 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
CXCL1P09341 SNORD116-23-201ENST00000384645 92 ntBASIC1.42□□□□□ -2.18
CXCL1P09341 MIR491-201ENST00000384877 84 ntBASIC1.42□□□□□ -2.18
CXCL1P09341 MIR888-201ENST00000401186 77 ntBASIC1.42□□□□□ -2.18
CXCL1P09341 TMSB4XP8-201ENST00000402089 135 ntBASIC1.42□□□□□ -2.18
CXCL1P09341 TMSB4XP6-201ENST00000415187 135 ntBASIC1.42□□□□□ -2.18
CXCL1P09341 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.42□□□□□ -2.18
CXCL1P09341 EIF1AXP1-201ENST00000419267 435 ntBASIC1.42□□□□□ -2.18
CXCL1P09341 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.42□□□□□ -2.18
CXCL1P09341 TMSB4XP1-201ENST00000424567 135 ntBASIC1.42□□□□□ -2.18
CXCL1P09341 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.42□□□□□ -2.18
CXCL1P09341 AC002542.1-201ENST00000440683 193 ntBASIC1.42□□□□□ -2.18
CXCL1P09341 MTCO1P48-201ENST00000448024 1096 ntBASIC1.42□□□□□ -2.18
CXCL1P09341 HMGN1P5-201ENST00000448591 263 ntBASIC1.42□□□□□ -2.18
CXCL1P09341 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
CXCL1P09341 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC1.42□□□□□ -2.18
CXCL1P09341 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC1.42□□□□□ -2.18
CXCL1P09341 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
CXCL1P09341 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.42□□□□□ -2.18
CXCL1P09341 AC008127.2-201ENST00000549925 1075 ntBASIC1.42□□□□□ -2.18
CXCL1P09341 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.42□□□□□ -2.18
CXCL1P09341 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC1.42□□□□□ -2.18
CXCL1P09341 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.42□□□□□ -2.18
CXCL1P09341 AC233266.2-201ENST00000567067 528 ntBASIC1.42□□□□□ -2.18
CXCL1P09341 AC023824.3-201ENST00000569003 562 ntBASIC1.42□□□□□ -2.18
CXCL1P09341 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.42□□□□□ -2.18
CXCL1P09341 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.42□□□□□ -2.18
CXCL1P09341 AL355802.4-201ENST00000607635 548 ntBASIC1.42□□□□□ -2.18
CXCL1P09341 AC007349.4-201ENST00000608114 532 ntBASIC1.42□□□□□ -2.18
CXCL1P09341 AC004908.2-201ENST00000609090 574 ntBASIC1.42□□□□□ -2.18
CXCL1P09341 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.42□□□□□ -2.18
CXCL1P09341 AC006020.1-201ENST00000420179 1854 ntBASIC1.41□□□□□ -2.18
CXCL1P09341 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CXCL1P09341 RN7SKP158-201ENST00000410453 326 ntBASIC1.41□□□□□ -2.18
CXCL1P09341 RNU2-49P-201ENST00000410666 184 ntBASIC1.41□□□□□ -2.18
CXCL1P09341 RNU4-53P-201ENST00000410828 140 ntBASIC1.41□□□□□ -2.18
CXCL1P09341 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.41□□□□□ -2.18
CXCL1P09341 RPS3AP44-201ENST00000425466 790 ntBASIC1.41□□□□□ -2.18
CXCL1P09341 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.41□□□□□ -2.18
CXCL1P09341 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC1.41□□□□□ -2.18
CXCL1P09341 RPL23AP3-201ENST00000453844 468 ntBASIC1.41□□□□□ -2.18
CXCL1P09341 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.41□□□□□ -2.18
CXCL1P09341 AC017007.3-201ENST00000479865 435 ntBASIC1.41□□□□□ -2.18
CXCL1P09341 AC020699.1-201ENST00000505161 445 ntBASIC1.41□□□□□ -2.18
CXCL1P09341 LTV1P1-201ENST00000510683 1237 ntBASIC1.41□□□□□ -2.18
CXCL1P09341 RNA5SP135-201ENST00000517019 125 ntBASIC1.41□□□□□ -2.18
CXCL1P09341 AC103833.1-201ENST00000517442 172 ntBASIC1.41□□□□□ -2.18
CXCL1P09341 AC022880.1-201ENST00000534017 973 ntBASIC1.41□□□□□ -2.18
CXCL1P09341 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
CXCL1P09341 AC009097.3-201ENST00000563557 1018 ntBASIC1.41□□□□□ -2.18
CXCL1P09341 AC093519.1-201ENST00000566109 298 ntBASIC1.41□□□□□ -2.18
CXCL1P09341 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.41□□□□□ -2.18
CXCL1P09341 AP000403.1-201ENST00000603349 851 ntBASIC1.41□□□□□ -2.18
CXCL1P09341 AC005034.5-201ENST00000604219 466 ntBASIC1.41□□□□□ -2.18
CXCL1P09341 AC069294.1-201ENST00000608397 350 ntBASIC1.41□□□□□ -2.18
CXCL1P09341 AC103710.1-201ENST00000610003 901 ntBASIC1.41□□□□□ -2.18
CXCL1P09341 Y_RNA.783-201ENST00000613546 102 ntBASIC1.41□□□□□ -2.18
CXCL1P09341 MIR6130-201ENST00000619419 109 ntBASIC1.41□□□□□ -2.18
CXCL1P09341 AC109809.1-201ENST00000619665 545 ntBASIC1.41□□□□□ -2.18
CXCL1P09341 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.41□□□□□ -2.18
CXCL1P09341 MIR219B-201ENST00000637023 88 ntBASIC1.41□□□□□ -2.18
CXCL1P09341 MTCO1P4-201ENST00000520516 1409 ntBASIC1.4□□□□□ -2.18
CXCL1P09341 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.4□□□□□ -2.18
CXCL1P09341 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC1.4□□□□□ -2.19
CXCL1P09341 OR4G2P-202ENST00000641004 1759 ntBASIC1.4□□□□□ -2.19
CXCL1P09341 RNA5SP289-201ENST00000362332 137 ntBASIC1.4□□□□□ -2.19
CXCL1P09341 SNORA5B-201ENST00000363786 132 ntBASIC1.4□□□□□ -2.19
CXCL1P09341 U8.14-201ENST00000390843 143 ntBASIC1.4□□□□□ -2.19
CXCL1P09341 AL356131.1-201ENST00000405826 414 ntBASIC1.4□□□□□ -2.19
CXCL1P09341 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.4□□□□□ -2.19
CXCL1P09341 AL135786.1-201ENST00000415892 214 ntBASIC1.4□□□□□ -2.19
CXCL1P09341 CCDC58P2-201ENST00000417131 366 ntBASIC1.4□□□□□ -2.19
CXCL1P09341 ZNF863P-201ENST00000426746 417 ntBASIC1.4□□□□□ -2.19
CXCL1P09341 TPTE2P1-204ENST00000435256 593 ntBASIC1.4□□□□□ -2.19
CXCL1P09341 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms