Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC011611.1-201ENST00000552179 197 ntBASIC4.21□□□□□ -1.74
HLA-DOAP06340 NCAPGP2-201ENST00000557911 754 ntBASIC4.21□□□□□ -1.74
HLA-DOAP06340 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.21□□□□□ -1.74
HLA-DOAP06340 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.21□□□□□ -1.74
HLA-DOAP06340 AC015813.4-201ENST00000610469 179 ntBASIC4.21□□□□□ -1.74
HLA-DOAP06340 AC006329.2-201ENST00000611491 394 ntBASIC4.21□□□□□ -1.74
HLA-DOAP06340 uc_338.12-201ENST00000616344 181 ntBASIC4.21□□□□□ -1.74
HLA-DOAP06340 AC103858.2-201ENST00000621471 543 ntBASIC4.21□□□□□ -1.74
HLA-DOAP06340 AL160413.1-201ENST00000622780 310 ntBASIC4.21□□□□□ -1.74
HLA-DOAP06340 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.21□□□□□ -1.74
HLA-DOAP06340 TPTEP1-208ENST00000636884 213 ntBASIC4.21□□□□□ -1.74
HLA-DOAP06340 AL732372.2-225ENST00000642124 456 ntBASIC4.21□□□□□ -1.74
HLA-DOAP06340 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DOAP06340 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DOAP06340 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.21□□□□□ -1.74
HLA-DOAP06340 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
HLA-DOAP06340 AC009902.3-201ENST00000606235 2172 ntBASIC4.2□□□□□ -1.74
HLA-DOAP06340 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
HLA-DOAP06340 AL645937.1-201ENST00000641739 1652 ntBASIC4.2□□□□□ -1.74
HLA-DOAP06340 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DOAP06340 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DOAP06340 MTND4P35-201ENST00000604257 1375 ntBASIC4.2□□□□□ -1.74
HLA-DOAP06340 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
HLA-DOAP06340 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
HLA-DOAP06340 RNU4-35P-201ENST00000362588 141 ntBASIC4.2□□□□□ -1.74
HLA-DOAP06340 RNU1-33P-201ENST00000364249 162 ntBASIC4.2□□□□□ -1.74
HLA-DOAP06340 RNU6-996P-201ENST00000365438 107 ntBASIC4.2□□□□□ -1.74
HLA-DOAP06340 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
HLA-DOAP06340 RNU6-339P-201ENST00000384310 107 ntBASIC4.2□□□□□ -1.74
HLA-DOAP06340 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DOAP06340 RNU6-373P-201ENST00000411247 98 ntBASIC4.2□□□□□ -1.74
HLA-DOAP06340 BX323014.1-201ENST00000412876 237 ntBASIC4.2□□□□□ -1.74
HLA-DOAP06340 AL158156.1-201ENST00000422509 473 ntBASIC4.2□□□□□ -1.74
HLA-DOAP06340 AL391219.1-201ENST00000422570 483 ntBASIC4.2□□□□□ -1.74
HLA-DOAP06340 DUTP6-201ENST00000425573 462 ntBASIC4.2□□□□□ -1.74
HLA-DOAP06340 MTCO3P46-201ENST00000425787 232 ntBASIC4.2□□□□□ -1.74
HLA-DOAP06340 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.2□□□□□ -1.74
HLA-DOAP06340 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.2□□□□□ -1.74
HLA-DOAP06340 RAC1P7-201ENST00000445367 377 ntBASIC4.2□□□□□ -1.74
HLA-DOAP06340 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.2□□□□□ -1.74
HLA-DOAP06340 MTCO2P29-201ENST00000465212 189 ntBASIC4.2□□□□□ -1.74
HLA-DOAP06340 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.2□□□□□ -1.74
HLA-DOAP06340 RN7SL601P-201ENST00000471221 293 ntBASIC4.2□□□□□ -1.74
HLA-DOAP06340 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.2□□□□□ -1.74
HLA-DOAP06340 AL163973.1-201ENST00000484753 577 ntBASIC4.2□□□□□ -1.74
HLA-DOAP06340 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.2□□□□□ -1.74
HLA-DOAP06340 AC004062.1-201ENST00000509926 645 ntBASIC4.2□□□□□ -1.74
HLA-DOAP06340 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.2□□□□□ -1.74
HLA-DOAP06340 TTC39CP1-201ENST00000512513 755 ntBASIC4.2□□□□□ -1.74
HLA-DOAP06340 RNU4-49P-201ENST00000516080 140 ntBASIC4.2□□□□□ -1.74
HLA-DOAP06340 RNU6-579P-201ENST00000516879 102 ntBASIC4.2□□□□□ -1.74
HLA-DOAP06340 RNU6-410P-201ENST00000517006 107 ntBASIC4.2□□□□□ -1.74
HLA-DOAP06340 SNORA70.24-201ENST00000517233 118 ntBASIC4.2□□□□□ -1.74
HLA-DOAP06340 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.2□□□□□ -1.74
HLA-DOAP06340 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.2□□□□□ -1.74
HLA-DOAP06340 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC4.2□□□□□ -1.74
HLA-DOAP06340 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.2□□□□□ -1.74
HLA-DOAP06340 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.2□□□□□ -1.74
HLA-DOAP06340 KC877982.1-201ENST00000602313 470 ntBASIC4.2□□□□□ -1.74
HLA-DOAP06340 AC105429.2-201ENST00000610567 517 ntBASIC4.2□□□□□ -1.74
HLA-DOAP06340 AC245517.5-201ENST00000611529 162 ntBASIC4.2□□□□□ -1.74
HLA-DOAP06340 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC4.2□□□□□ -1.74
HLA-DOAP06340 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DOAP06340 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.2□□□□□ -1.74
HLA-DOAP06340 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DOAP06340 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.19□□□□□ -1.74
HLA-DOAP06340 RNU6-1227P-201ENST00000383981 107 ntBASIC4.19□□□□□ -1.74
HLA-DOAP06340 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.19□□□□□ -1.74
HLA-DOAP06340 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.19□□□□□ -1.74
HLA-DOAP06340 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.19□□□□□ -1.74
HLA-DOAP06340 SRIP2-201ENST00000428470 166 ntBASIC4.19□□□□□ -1.74
HLA-DOAP06340 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.19□□□□□ -1.74
HLA-DOAP06340 AL365400.1-201ENST00000431854 640 ntBASIC4.19□□□□□ -1.74
HLA-DOAP06340 MRPS18BP2-201ENST00000434310 759 ntBASIC4.19□□□□□ -1.74
HLA-DOAP06340 MTATP6P16-201ENST00000434543 526 ntBASIC4.19□□□□□ -1.74
HLA-DOAP06340 AC005019.1-201ENST00000436455 431 ntBASIC4.19□□□□□ -1.74
HLA-DOAP06340 RPL5P30-201ENST00000465511 891 ntBASIC4.19□□□□□ -1.74
HLA-DOAP06340 MTND4P17-201ENST00000470444 350 ntBASIC4.19□□□□□ -1.74
HLA-DOAP06340 RPL23AP41-201ENST00000484754 458 ntBASIC4.19□□□□□ -1.74
HLA-DOAP06340 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.19□□□□□ -1.74
HLA-DOAP06340 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.19□□□□□ -1.74
HLA-DOAP06340 AC017037.2-201ENST00000513850 890 ntBASIC4.19□□□□□ -1.74
HLA-DOAP06340 SNORD60.2-201ENST00000516883 86 ntBASIC4.19□□□□□ -1.74
HLA-DOAP06340 AP005597.4-201ENST00000526762 229 ntBASIC4.19□□□□□ -1.74
HLA-DOAP06340 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.19□□□□□ -1.74
HLA-DOAP06340 KLKP1-201ENST00000595979 403 ntBASIC4.19□□□□□ -1.74
HLA-DOAP06340 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.19□□□□□ -1.74
HLA-DOAP06340 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.19□□□□□ -1.74
HLA-DOAP06340 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
HLA-DOAP06340 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HLA-DOAP06340 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HLA-DOAP06340 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
HLA-DOAP06340 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HLA-DOAP06340 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.18□□□□□ -1.74
HLA-DOAP06340 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.18□□□□□ -1.74
HLA-DOAP06340 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.18□□□□□ -1.74
HLA-DOAP06340 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
HLA-DOAP06340 Y_RNA.326-201ENST00000365176 113 ntBASIC4.18□□□□□ -1.74
HLA-DOAP06340 MIR491-201ENST00000384877 84 ntBASIC4.18□□□□□ -1.74
HLA-DOAP06340 UBE2V1P2-201ENST00000397758 440 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms