Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 MTND4P8-201ENST00000514997 1362 ntBASIC1.78□□□□□ -2.12
COL1A1P02452 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.13
COL1A1P02452 RNU5D-1-201ENST00000363299 116 ntBASIC1.77□□□□□ -2.13
COL1A1P02452 Y_RNA.205-201ENST00000364128 113 ntBASIC1.77□□□□□ -2.13
COL1A1P02452 RNA5SP354-201ENST00000391247 136 ntBASIC1.77□□□□□ -2.13
COL1A1P02452 RPL23AP29-201ENST00000397284 453 ntBASIC1.77□□□□□ -2.13
COL1A1P02452 RNU6-193P-201ENST00000410977 107 ntBASIC1.77□□□□□ -2.13
COL1A1P02452 RPL7P29-201ENST00000437151 728 ntBASIC1.77□□□□□ -2.13
COL1A1P02452 OR10R1P-201ENST00000441524 1141 ntBASIC1.77□□□□□ -2.13
COL1A1P02452 PIGFP3-201ENST00000441918 722 ntBASIC1.77□□□□□ -2.13
COL1A1P02452 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.77□□□□□ -2.13
COL1A1P02452 UBE2Q2P9-201ENST00000490086 202 ntBASIC1.77□□□□□ -2.13
COL1A1P02452 SUMO1P1-201ENST00000497904 306 ntBASIC1.77□□□□□ -2.13
COL1A1P02452 AC021146.8-201ENST00000507455 733 ntBASIC1.77□□□□□ -2.13
COL1A1P02452 HMGB3P3-201ENST00000510526 400 ntBASIC1.77□□□□□ -2.13
COL1A1P02452 AC139103.1-201ENST00000534696 1030 ntBASIC1.77□□□□□ -2.13
COL1A1P02452 AL731537.2-201ENST00000561565 951 ntBASIC1.77□□□□□ -2.13
COL1A1P02452 AC010928.2-201ENST00000588017 287 ntBASIC1.77□□□□□ -2.13
COL1A1P02452 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.77□□□□□ -2.13
COL1A1P02452 AL353770.2-201ENST00000620024 78 ntBASIC1.77□□□□□ -2.13
COL1A1P02452 AC025048.6-202ENST00000627667 438 ntBASIC1.77□□□□□ -2.13
COL1A1P02452 AC008669.1-201ENST00000565823 2178 ntBASIC1.77□□□□□ -2.13
COL1A1P02452 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
COL1A1P02452 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
COL1A1P02452 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.76□□□□□ -2.13
COL1A1P02452 AL356320.2-201ENST00000417263 507 ntBASIC1.76□□□□□ -2.13
COL1A1P02452 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.76□□□□□ -2.13
COL1A1P02452 AC010099.1-201ENST00000455434 375 ntBASIC1.76□□□□□ -2.13
COL1A1P02452 MRPL42P6-201ENST00000486397 371 ntBASIC1.76□□□□□ -2.13
COL1A1P02452 NUP58P1-201ENST00000502546 1738 ntBASIC1.76□□□□□ -2.13
COL1A1P02452 AC096751.1-202ENST00000502691 1067 ntBASIC1.76□□□□□ -2.13
COL1A1P02452 PRELID3BP4-201ENST00000515476 571 ntBASIC1.76□□□□□ -2.13
COL1A1P02452 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC1.76□□□□□ -2.13
COL1A1P02452 SUB1P1-201ENST00000524415 382 ntBASIC1.76□□□□□ -2.13
COL1A1P02452 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.76□□□□□ -2.13
COL1A1P02452 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.76□□□□□ -2.13
COL1A1P02452 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.76□□□□□ -2.13
COL1A1P02452 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.76□□□□□ -2.13
COL1A1P02452 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC1.76□□□□□ -2.13
COL1A1P02452 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
COL1A1P02452 AC116618.1-201ENST00000634617 774 ntBASIC1.76□□□□□ -2.13
COL1A1P02452 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
COL1A1P02452 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
COL1A1P02452 MIR96-201ENST00000362288 78 ntBASIC1.75□□□□□ -2.13
COL1A1P02452 AL023807.1-201ENST00000407932 359 ntBASIC1.75□□□□□ -2.13
COL1A1P02452 RNU2-40P-201ENST00000410833 196 ntBASIC1.75□□□□□ -2.13
COL1A1P02452 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
COL1A1P02452 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1.75□□□□□ -2.13
COL1A1P02452 AC090774.1-201ENST00000435925 246 ntBASIC1.75□□□□□ -2.13
COL1A1P02452 GTF2IP7-202ENST00000436677 309 ntBASIC1.75□□□□□ -2.13
COL1A1P02452 YWHAZP8-201ENST00000436935 731 ntBASIC1.75□□□□□ -2.13
COL1A1P02452 AL445687.1-201ENST00000439946 251 ntBASIC1.75□□□□□ -2.13
COL1A1P02452 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC1.75□□□□□ -2.13
COL1A1P02452 RNF2P1-201ENST00000442955 1010 ntBASIC1.75□□□□□ -2.13
COL1A1P02452 OR6K5P-201ENST00000447050 945 ntBASIC1.75□□□□□ -2.13
COL1A1P02452 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.75□□□□□ -2.13
COL1A1P02452 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC1.75□□□□□ -2.13
COL1A1P02452 AC114322.1-201ENST00000506771 926 ntBASIC1.75□□□□□ -2.13
COL1A1P02452 AC104057.1-201ENST00000515547 497 ntBASIC1.75□□□□□ -2.13
COL1A1P02452 AC087808.1-201ENST00000520501 361 ntBASIC1.75□□□□□ -2.13
COL1A1P02452 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.75□□□□□ -2.13
COL1A1P02452 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.75□□□□□ -2.13
COL1A1P02452 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
COL1A1P02452 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC1.75□□□□□ -2.13
COL1A1P02452 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
COL1A1P02452 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
COL1A1P02452 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
COL1A1P02452 RNU1-52P-201ENST00000384190 164 ntBASIC1.75□□□□□ -2.13
COL1A1P02452 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.75□□□□□ -2.13
COL1A1P02452 AL445669.1-201ENST00000426743 755 ntBASIC1.75□□□□□ -2.13
COL1A1P02452 AL121871.1-201ENST00000443413 436 ntBASIC1.75□□□□□ -2.13
COL1A1P02452 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.75□□□□□ -2.13
COL1A1P02452 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.75□□□□□ -2.13
COL1A1P02452 AC108734.3-201ENST00000481241 1165 ntBASIC1.75□□□□□ -2.13
COL1A1P02452 RPL23AP41-201ENST00000484754 458 ntBASIC1.75□□□□□ -2.13
COL1A1P02452 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.75□□□□□ -2.13
COL1A1P02452 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
COL1A1P02452 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.75□□□□□ -2.13
COL1A1P02452 OR5AQ1P-201ENST00000527596 927 ntBASIC1.75□□□□□ -2.13
COL1A1P02452 AP005435.4-201ENST00000529514 284 ntBASIC1.75□□□□□ -2.13
COL1A1P02452 AC138473.1-201ENST00000605717 526 ntBASIC1.75□□□□□ -2.13
COL1A1P02452 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
COL1A1P02452 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.74□□□□□ -2.13
COL1A1P02452 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
COL1A1P02452 RNU6-1072P-201ENST00000384703 107 ntBASIC1.74□□□□□ -2.13
COL1A1P02452 RNU6-443P-201ENST00000384780 107 ntBASIC1.74□□□□□ -2.13
COL1A1P02452 MIR524-201ENST00000385242 87 ntBASIC1.74□□□□□ -2.13
COL1A1P02452 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.74□□□□□ -2.13
COL1A1P02452 RPS15AP38-201ENST00000413110 372 ntBASIC1.74□□□□□ -2.13
COL1A1P02452 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.74□□□□□ -2.13
COL1A1P02452 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.74□□□□□ -2.13
COL1A1P02452 FO393419.3-201ENST00000428741 282 ntBASIC1.74□□□□□ -2.13
COL1A1P02452 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC1.74□□□□□ -2.13
COL1A1P02452 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.74□□□□□ -2.13
COL1A1P02452 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC1.74□□□□□ -2.13
COL1A1P02452 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
COL1A1P02452 TRAV28-201ENST00000557548 323 ntBASIC1.74□□□□□ -2.13
COL1A1P02452 MIR3122-201ENST00000577243 73 ntBASIC1.74□□□□□ -2.13
COL1A1P02452 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC1.74□□□□□ -2.13
COL1A1P02452 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms