Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 RNU6-798P-201ENST00000516912 103 ntBASIC3.38□□□□□ -1.87
LDLRP01130 AC103783.1-201ENST00000520506 373 ntBASIC3.38□□□□□ -1.87
LDLRP01130 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LDLRP01130 AL133271.1-201ENST00000538229 291 ntBASIC3.38□□□□□ -1.87
LDLRP01130 AC018630.1-201ENST00000541376 925 ntBASIC3.38□□□□□ -1.87
LDLRP01130 SETP2-201ENST00000553886 926 ntBASIC3.38□□□□□ -1.87
LDLRP01130 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.38□□□□□ -1.87
LDLRP01130 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.38□□□□□ -1.87
LDLRP01130 SNORD84-203ENST00000584275 78 ntBASIC3.38□□□□□ -1.87
LDLRP01130 SEPT7P9-203ENST00000604116 343 ntBASIC3.38□□□□□ -1.87
LDLRP01130 RNU1-30P-201ENST00000606575 163 ntBASIC3.38□□□□□ -1.87
LDLRP01130 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.38□□□□□ -1.87
LDLRP01130 AC012150.2-201ENST00000621300 544 ntBASIC3.38□□□□□ -1.87
LDLRP01130 DUXAP9-208ENST00000622815 614 ntBASIC3.38□□□□□ -1.87
LDLRP01130 AP000553.6-201ENST00000641242 118 ntBASIC3.38□□□□□ -1.87
LDLRP01130 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.38□□□□□ -1.87
LDLRP01130 AL645937.1-201ENST00000641739 1652 ntBASIC3.38□□□□□ -1.87
LDLRP01130 AL136164.4-201ENST00000625013 2135 ntBASIC3.38□□□□□ -1.87
LDLRP01130 AC009902.3-201ENST00000606235 2172 ntBASIC3.38□□□□□ -1.87
LDLRP01130 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
LDLRP01130 AC007656.2-201ENST00000624902 4547 ntBASIC3.38□□□□□ -1.87
LDLRP01130 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LDLRP01130 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.37□□□□□ -1.87
LDLRP01130 Y_RNA.813-201ENST00000364639 102 ntBASIC3.37□□□□□ -1.87
LDLRP01130 SNORA40.3-201ENST00000390964 122 ntBASIC3.37□□□□□ -1.87
LDLRP01130 EI24P2-201ENST00000397776 1076 ntBASIC3.37□□□□□ -1.87
LDLRP01130 MIR1277-201ENST00000408536 78 ntBASIC3.37□□□□□ -1.87
LDLRP01130 U3.39-201ENST00000408569 239 ntBASIC3.37□□□□□ -1.87
LDLRP01130 RNA5SP120-201ENST00000410900 112 ntBASIC3.37□□□□□ -1.87
LDLRP01130 RNA5SP31-201ENST00000411144 127 ntBASIC3.37□□□□□ -1.87
LDLRP01130 RNA5SP107-201ENST00000411358 122 ntBASIC3.37□□□□□ -1.87
LDLRP01130 USP9YP13-201ENST00000417797 480 ntBASIC3.37□□□□□ -1.87
LDLRP01130 RPL21P32-201ENST00000419877 477 ntBASIC3.37□□□□□ -1.87
LDLRP01130 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.37□□□□□ -1.87
LDLRP01130 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.37□□□□□ -1.87
LDLRP01130 AC073063.1-201ENST00000434352 607 ntBASIC3.37□□□□□ -1.87
LDLRP01130 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.37□□□□□ -1.87
LDLRP01130 KLF3P2-201ENST00000465138 268 ntBASIC3.37□□□□□ -1.87
LDLRP01130 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.37□□□□□ -1.87
LDLRP01130 MLLT10P2-201ENST00000506434 249 ntBASIC3.37□□□□□ -1.87
LDLRP01130 KLHL2P1-201ENST00000508691 521 ntBASIC3.37□□□□□ -1.87
LDLRP01130 AC117522.1-201ENST00000509821 380 ntBASIC3.37□□□□□ -1.87
LDLRP01130 RNU6-314P-201ENST00000516574 104 ntBASIC3.37□□□□□ -1.87
LDLRP01130 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.37□□□□□ -1.87
LDLRP01130 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LDLRP01130 DEFB108A-201ENST00000530110 222 ntBASIC3.37□□□□□ -1.87
LDLRP01130 AP002453.2-201ENST00000533503 320 ntBASIC3.37□□□□□ -1.87
LDLRP01130 AC123904.2-201ENST00000548059 300 ntBASIC3.37□□□□□ -1.87
LDLRP01130 BNIP3P8-201ENST00000597863 560 ntBASIC3.37□□□□□ -1.87
LDLRP01130 AP001429.1-201ENST00000602568 530 ntBASIC3.37□□□□□ -1.87
LDLRP01130 AC112191.3-201ENST00000604371 277 ntBASIC3.37□□□□□ -1.87
LDLRP01130 AL022099.1-201ENST00000604551 712 ntBASIC3.37□□□□□ -1.87
LDLRP01130 AL022154.1-201ENST00000604698 785 ntBASIC3.37□□□□□ -1.87
LDLRP01130 AC006077.1-201ENST00000604746 343 ntBASIC3.37□□□□□ -1.87
LDLRP01130 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.37□□□□□ -1.87
LDLRP01130 AC092954.2-201ENST00000609103 430 ntBASIC3.37□□□□□ -1.87
LDLRP01130 AL355472.4-201ENST00000610233 626 ntBASIC3.37□□□□□ -1.87
LDLRP01130 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.37□□□□□ -1.87
LDLRP01130 AC008250.2-201ENST00000615261 205 ntBASIC3.37□□□□□ -1.87
LDLRP01130 AL353748.2-201ENST00000622148 471 ntBASIC3.37□□□□□ -1.87
LDLRP01130 AC110801.1-201ENST00000623590 212 ntBASIC3.37□□□□□ -1.87
LDLRP01130 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.37□□□□□ -1.87
LDLRP01130 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.37□□□□□ -1.87
LDLRP01130 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.37□□□□□ -1.87
LDLRP01130 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.37□□□□□ -1.87
LDLRP01130 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.37□□□□□ -1.87
LDLRP01130 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LDLRP01130 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LDLRP01130 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LDLRP01130 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LDLRP01130 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LDLRP01130 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LDLRP01130 MIR181A1-201ENST00000385026 110 ntBASIC3.36□□□□□ -1.87
LDLRP01130 SOD2P1-201ENST00000396543 562 ntBASIC3.36□□□□□ -1.87
LDLRP01130 Y_RNA.608-201ENST00000410647 95 ntBASIC3.36□□□□□ -1.87
LDLRP01130 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.36□□□□□ -1.87
LDLRP01130 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.36□□□□□ -1.87
LDLRP01130 CYCSP4-201ENST00000429682 331 ntBASIC3.36□□□□□ -1.87
LDLRP01130 AC000111.3-201ENST00000433478 193 ntBASIC3.36□□□□□ -1.87
LDLRP01130 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.36□□□□□ -1.87
LDLRP01130 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.36□□□□□ -1.87
LDLRP01130 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.36□□□□□ -1.87
LDLRP01130 AL357552.1-201ENST00000445254 415 ntBASIC3.36□□□□□ -1.87
LDLRP01130 TPT1P14-201ENST00000448018 505 ntBASIC3.36□□□□□ -1.87
LDLRP01130 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LDLRP01130 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.36□□□□□ -1.87
LDLRP01130 RPS24P6-201ENST00000452670 400 ntBASIC3.36□□□□□ -1.87
LDLRP01130 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.36□□□□□ -1.87
LDLRP01130 SNORD42A-201ENST00000459584 64 ntBASIC3.36□□□□□ -1.87
LDLRP01130 AC008155.2-201ENST00000464337 397 ntBASIC3.36□□□□□ -1.87
LDLRP01130 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.36□□□□□ -1.87
LDLRP01130 AC093278.1-201ENST00000494700 600 ntBASIC3.36□□□□□ -1.87
LDLRP01130 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.36□□□□□ -1.87
LDLRP01130 AC091133.4-201ENST00000511142 308 ntBASIC3.36□□□□□ -1.87
LDLRP01130 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.36□□□□□ -1.87
LDLRP01130 AC022878.1-201ENST00000530684 149 ntBASIC3.36□□□□□ -1.87
LDLRP01130 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.36□□□□□ -1.87
LDLRP01130 AC004024.1-201ENST00000549244 247 ntBASIC3.36□□□□□ -1.87
LDLRP01130 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.36□□□□□ -1.87
LDLRP01130 AC125611.2-201ENST00000551907 647 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 163.4 ms