Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.51□□□□□ -2.01
CLDN9O95484 AL133445.2-201ENST00000611191 527 ntBASIC2.51□□□□□ -2.01
CLDN9O95484 AC093838.1-201ENST00000613014 469 ntBASIC2.51□□□□□ -2.01
CLDN9O95484 TUG1_2.1-201ENST00000614234 87 ntBASIC2.51□□□□□ -2.01
CLDN9O95484 AC010133.1-201ENST00000615809 842 ntBASIC2.51□□□□□ -2.01
CLDN9O95484 AC006386.1-201ENST00000619436 415 ntBASIC2.51□□□□□ -2.01
CLDN9O95484 AC079228.1-201ENST00000624774 1049 ntBASIC2.51□□□□□ -2.01
CLDN9O95484 AC006378.2-201ENST00000623178 2476 ntBASIC2.51□□□□□ -2.01
CLDN9O95484 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CLDN9O95484 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.5□□□□□ -2.01
CLDN9O95484 Z82195.2-201ENST00000612348 18351 ntBASIC2.5□□□□□ -2.01
CLDN9O95484 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CLDN9O95484 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
CLDN9O95484 RNU6-217P-201ENST00000384164 104 ntBASIC2.5□□□□□ -2.01
CLDN9O95484 RNU6-754P-201ENST00000391166 107 ntBASIC2.5□□□□□ -2.01
CLDN9O95484 TXNP7-201ENST00000406296 293 ntBASIC2.5□□□□□ -2.01
CLDN9O95484 MIR320C1-201ENST00000408566 88 ntBASIC2.5□□□□□ -2.01
CLDN9O95484 RNU2-33P-201ENST00000410344 192 ntBASIC2.5□□□□□ -2.01
CLDN9O95484 MTND1P21-201ENST00000412991 285 ntBASIC2.5□□□□□ -2.01
CLDN9O95484 AL096701.2-201ENST00000416920 238 ntBASIC2.5□□□□□ -2.01
CLDN9O95484 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.5□□□□□ -2.01
CLDN9O95484 AL451054.2-201ENST00000420896 202 ntBASIC2.5□□□□□ -2.01
CLDN9O95484 AL354692.1-201ENST00000423044 315 ntBASIC2.5□□□□□ -2.01
CLDN9O95484 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.5□□□□□ -2.01
CLDN9O95484 AC092648.1-201ENST00000425870 423 ntBASIC2.5□□□□□ -2.01
CLDN9O95484 RPL35AP22-201ENST00000436855 335 ntBASIC2.5□□□□□ -2.01
CLDN9O95484 AC107083.1-201ENST00000439643 279 ntBASIC2.5□□□□□ -2.01
CLDN9O95484 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC2.5□□□□□ -2.01
CLDN9O95484 FGF7P5-201ENST00000441829 291 ntBASIC2.5□□□□□ -2.01
CLDN9O95484 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.5□□□□□ -2.01
CLDN9O95484 TPT1P14-201ENST00000448018 505 ntBASIC2.5□□□□□ -2.01
CLDN9O95484 RPS15AP27-201ENST00000449183 343 ntBASIC2.5□□□□□ -2.01
CLDN9O95484 RPS20P22-201ENST00000473700 357 ntBASIC2.5□□□□□ -2.01
CLDN9O95484 RPL31P41-201ENST00000477967 372 ntBASIC2.5□□□□□ -2.01
CLDN9O95484 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.5□□□□□ -2.01
CLDN9O95484 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.5□□□□□ -2.01
CLDN9O95484 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.5□□□□□ -2.01
CLDN9O95484 MTND3P3-201ENST00000505004 126 ntBASIC2.5□□□□□ -2.01
CLDN9O95484 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.5□□□□□ -2.01
CLDN9O95484 AC093281.2-201ENST00000510153 597 ntBASIC2.5□□□□□ -2.01
CLDN9O95484 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.5□□□□□ -2.01
CLDN9O95484 TBCAP3-201ENST00000512475 312 ntBASIC2.5□□□□□ -2.01
CLDN9O95484 MRPS36P2-201ENST00000512569 299 ntBASIC2.5□□□□□ -2.01
CLDN9O95484 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.5□□□□□ -2.01
CLDN9O95484 AC096725.1-201ENST00000514266 313 ntBASIC2.5□□□□□ -2.01
CLDN9O95484 RNA5SP282-201ENST00000516355 108 ntBASIC2.5□□□□□ -2.01
CLDN9O95484 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.5□□□□□ -2.01
CLDN9O95484 GTF3AP2-201ENST00000557014 266 ntBASIC2.5□□□□□ -2.01
CLDN9O95484 AC087465.1-201ENST00000560574 245 ntBASIC2.5□□□□□ -2.01
CLDN9O95484 HMGN2P15-201ENST00000585707 270 ntBASIC2.5□□□□□ -2.01
CLDN9O95484 AF038458.1-201ENST00000588406 262 ntBASIC2.5□□□□□ -2.01
CLDN9O95484 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.5□□□□□ -2.01
CLDN9O95484 AL161729.4-201ENST00000604650 476 ntBASIC2.5□□□□□ -2.01
CLDN9O95484 AC024560.3-201ENST00000608482 349 ntBASIC2.5□□□□□ -2.01
CLDN9O95484 SDR42E1P2-201ENST00000614861 481 ntBASIC2.5□□□□□ -2.01
CLDN9O95484 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.5□□□□□ -2.01
CLDN9O95484 AP003399.1-201ENST00000637534 361 ntBASIC2.5□□□□□ -2.01
CLDN9O95484 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
CLDN9O95484 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CLDN9O95484 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.5□□□□□ -2.01
CLDN9O95484 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.49□□□□□ -2.01
CLDN9O95484 RNU6-140P-201ENST00000384566 108 ntBASIC2.49□□□□□ -2.01
CLDN9O95484 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.49□□□□□ -2.01
CLDN9O95484 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.49□□□□□ -2.01
CLDN9O95484 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.49□□□□□ -2.01
CLDN9O95484 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.49□□□□□ -2.01
CLDN9O95484 PTENP1-201ENST00000447117 1215 ntBASIC2.49□□□□□ -2.01
CLDN9O95484 AP000542.1-201ENST00000448473 371 ntBASIC2.49□□□□□ -2.01
CLDN9O95484 RPL23AP70-201ENST00000483361 460 ntBASIC2.49□□□□□ -2.01
CLDN9O95484 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC2.49□□□□□ -2.01
CLDN9O95484 AC134050.1-201ENST00000495088 933 ntBASIC2.49□□□□□ -2.01
CLDN9O95484 SEM1P1-201ENST00000506694 209 ntBASIC2.49□□□□□ -2.01
CLDN9O95484 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.49□□□□□ -2.01
CLDN9O95484 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.49□□□□□ -2.01
CLDN9O95484 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.49□□□□□ -2.01
CLDN9O95484 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.49□□□□□ -2.01
CLDN9O95484 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.49□□□□□ -2.01
CLDN9O95484 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.49□□□□□ -2.01
CLDN9O95484 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.49□□□□□ -2.01
CLDN9O95484 AC060771.1-201ENST00000582031 164 ntBASIC2.49□□□□□ -2.01
CLDN9O95484 MIR4672-201ENST00000583126 81 ntBASIC2.49□□□□□ -2.01
CLDN9O95484 UBE2L4-201ENST00000587688 464 ntBASIC2.49□□□□□ -2.01
CLDN9O95484 AC091057.3-201ENST00000602684 733 ntBASIC2.49□□□□□ -2.01
CLDN9O95484 RNU4-5P-201ENST00000607255 135 ntBASIC2.49□□□□□ -2.01
CLDN9O95484 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.49□□□□□ -2.01
CLDN9O95484 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.49□□□□□ -2.01
CLDN9O95484 AL158801.5-201ENST00000623123 465 ntBASIC2.49□□□□□ -2.01
CLDN9O95484 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.49□□□□□ -2.01
CLDN9O95484 MTND1P37-201ENST00000636562 264 ntBASIC2.49□□□□□ -2.01
CLDN9O95484 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CLDN9O95484 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.49□□□□□ -2.01
CLDN9O95484 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
CLDN9O95484 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
CLDN9O95484 OR5J1P-201ENST00000313544 939 ntBASIC2.48□□□□□ -2.01
CLDN9O95484 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
CLDN9O95484 SNORD62.1-201ENST00000362541 86 ntBASIC2.48□□□□□ -2.01
CLDN9O95484 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.48□□□□□ -2.01
CLDN9O95484 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CLDN9O95484 RNU6-636P-201ENST00000384598 107 ntBASIC2.48□□□□□ -2.01
CLDN9O95484 MIR627-201ENST00000384979 97 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 172.2 ms