Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 MTND1P33-201ENST00000446251 917 ntBASIC1.39□□□□□ -2.19
SNRNP200O75643 AL136380.1-201ENST00000447970 162 ntBASIC1.39□□□□□ -2.19
SNRNP200O75643 RPS27P21-201ENST00000486977 252 ntBASIC1.39□□□□□ -2.19
SNRNP200O75643 RPS27P23-201ENST00000487608 251 ntBASIC1.39□□□□□ -2.19
SNRNP200O75643 AC104685.1-201ENST00000502445 371 ntBASIC1.39□□□□□ -2.19
SNRNP200O75643 MTCO2P9-201ENST00000503214 694 ntBASIC1.39□□□□□ -2.19
SNRNP200O75643 AC093770.1-201ENST00000511559 571 ntBASIC1.39□□□□□ -2.19
SNRNP200O75643 MRPS17P9-201ENST00000511924 393 ntBASIC1.39□□□□□ -2.19
SNRNP200O75643 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.39□□□□□ -2.19
SNRNP200O75643 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC1.39□□□□□ -2.19
SNRNP200O75643 AP005902.1-201ENST00000521358 186 ntBASIC1.39□□□□□ -2.19
SNRNP200O75643 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC1.39□□□□□ -2.19
SNRNP200O75643 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.39□□□□□ -2.19
SNRNP200O75643 MIR4421-201ENST00000578133 69 ntBASIC1.39□□□□□ -2.19
SNRNP200O75643 MIR4287-201ENST00000579398 78 ntBASIC1.39□□□□□ -2.19
SNRNP200O75643 AC018618.2-201ENST00000604770 446 ntBASIC1.39□□□□□ -2.19
SNRNP200O75643 HMGB1P24-202ENST00000615653 685 ntBASIC1.39□□□□□ -2.19
SNRNP200O75643 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.39□□□□□ -2.19
SNRNP200O75643 OR5H6-203ENST00000642105 978 ntBASIC1.39□□□□□ -2.19
SNRNP200O75643 DDX10P1-201ENST00000448545 1933 ntBASIC1.39□□□□□ -2.19
SNRNP200O75643 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
SNRNP200O75643 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
SNRNP200O75643 RPS3AP24-201ENST00000407896 734 ntBASIC1.39□□□□□ -2.19
SNRNP200O75643 AL356379.1-201ENST00000414105 126 ntBASIC1.39□□□□□ -2.19
SNRNP200O75643 Z85995.1-201ENST00000415547 335 ntBASIC1.39□□□□□ -2.19
SNRNP200O75643 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC1.39□□□□□ -2.19
SNRNP200O75643 AC090774.1-201ENST00000435925 246 ntBASIC1.39□□□□□ -2.19
SNRNP200O75643 snoU13.28-201ENST00000459235 104 ntBASIC1.39□□□□□ -2.19
SNRNP200O75643 UBE2Q2P9-201ENST00000490086 202 ntBASIC1.39□□□□□ -2.19
SNRNP200O75643 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC1.39□□□□□ -2.19
SNRNP200O75643 AC025755.1-201ENST00000521306 278 ntBASIC1.39□□□□□ -2.19
SNRNP200O75643 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.39□□□□□ -2.19
SNRNP200O75643 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.39□□□□□ -2.19
SNRNP200O75643 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.39□□□□□ -2.19
SNRNP200O75643 MIR3921-201ENST00000577308 85 ntBASIC1.39□□□□□ -2.19
SNRNP200O75643 BX322635.1-201ENST00000605804 496 ntBASIC1.39□□□□□ -2.19
SNRNP200O75643 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.39□□□□□ -2.19
SNRNP200O75643 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
SNRNP200O75643 RNA5SP27-201ENST00000363839 119 ntBASIC1.38□□□□□ -2.19
SNRNP200O75643 RNU6-461P-201ENST00000364195 107 ntBASIC1.38□□□□□ -2.19
SNRNP200O75643 RPL23AP36-201ENST00000413895 458 ntBASIC1.38□□□□□ -2.19
SNRNP200O75643 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.38□□□□□ -2.19
SNRNP200O75643 AC074117.2-201ENST00000417130 397 ntBASIC1.38□□□□□ -2.19
SNRNP200O75643 AC244453.4-201ENST00000419150 388 ntBASIC1.38□□□□□ -2.19
SNRNP200O75643 SEPT2P1-201ENST00000419651 180 ntBASIC1.38□□□□□ -2.19
SNRNP200O75643 AL035410.1-201ENST00000427409 427 ntBASIC1.38□□□□□ -2.19
SNRNP200O75643 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.38□□□□□ -2.19
SNRNP200O75643 OR52A4P-202ENST00000481634 799 ntBASIC1.38□□□□□ -2.19
SNRNP200O75643 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.38□□□□□ -2.19
SNRNP200O75643 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.38□□□□□ -2.19
SNRNP200O75643 AC093281.2-201ENST00000510153 597 ntBASIC1.38□□□□□ -2.19
SNRNP200O75643 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.38□□□□□ -2.19
SNRNP200O75643 RNA5SP61-201ENST00000516453 100 ntBASIC1.38□□□□□ -2.19
SNRNP200O75643 IGKV2D-36-201ENST00000518643 226 ntBASIC1.38□□□□□ -2.19
SNRNP200O75643 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.38□□□□□ -2.19
SNRNP200O75643 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.38□□□□□ -2.19
SNRNP200O75643 ANP32BP3-201ENST00000559213 706 ntBASIC1.38□□□□□ -2.19
SNRNP200O75643 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.38□□□□□ -2.19
SNRNP200O75643 AC005296.1-201ENST00000616145 209 ntBASIC1.38□□□□□ -2.19
SNRNP200O75643 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.38□□□□□ -2.19
SNRNP200O75643 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC1.38□□□□□ -2.19
SNRNP200O75643 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
SNRNP200O75643 CR848007.1-201ENST00000442354 1699 ntBASIC1.38□□□□□ -2.19
SNRNP200O75643 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.38□□□□□ -2.19
SNRNP200O75643 AC006026.1-201ENST00000444025 1803 ntBASIC1.38□□□□□ -2.19
SNRNP200O75643 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.37□□□□□ -2.19
SNRNP200O75643 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
SNRNP200O75643 RNU6-198P-201ENST00000384258 104 ntBASIC1.37□□□□□ -2.19
SNRNP200O75643 TAF9BP2-201ENST00000400856 499 ntBASIC1.37□□□□□ -2.19
SNRNP200O75643 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.37□□□□□ -2.19
SNRNP200O75643 BTF3P4-201ENST00000418852 495 ntBASIC1.37□□□□□ -2.19
SNRNP200O75643 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC1.37□□□□□ -2.19
SNRNP200O75643 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.37□□□□□ -2.19
SNRNP200O75643 AC140059.1-201ENST00000489238 361 ntBASIC1.37□□□□□ -2.19
SNRNP200O75643 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC1.37□□□□□ -2.19
SNRNP200O75643 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.37□□□□□ -2.19
SNRNP200O75643 AC090666.1-201ENST00000578241 445 ntBASIC1.37□□□□□ -2.19
SNRNP200O75643 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC1.37□□□□□ -2.19
SNRNP200O75643 AC022387.2-201ENST00000604050 448 ntBASIC1.37□□□□□ -2.19
SNRNP200O75643 AC025588.3-201ENST00000604182 274 ntBASIC1.37□□□□□ -2.19
SNRNP200O75643 MIR8070-201ENST00000616510 88 ntBASIC1.37□□□□□ -2.19
SNRNP200O75643 AC018926.3-201ENST00000618841 406 ntBASIC1.37□□□□□ -2.19
SNRNP200O75643 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
SNRNP200O75643 MTCO1P4-201ENST00000520516 1409 ntBASIC1.37□□□□□ -2.19
SNRNP200O75643 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.37□□□□□ -2.19
SNRNP200O75643 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.37□□□□□ -2.19
SNRNP200O75643 CIR1P3-201ENST00000405137 479 ntBASIC1.37□□□□□ -2.19
SNRNP200O75643 AL513475.1-201ENST00000406602 315 ntBASIC1.37□□□□□ -2.19
SNRNP200O75643 OFD1P2Y-201ENST00000421895 1149 ntBASIC1.37□□□□□ -2.19
SNRNP200O75643 AC018630.2-202ENST00000422992 927 ntBASIC1.37□□□□□ -2.19
SNRNP200O75643 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
SNRNP200O75643 AC024082.2-201ENST00000434771 238 ntBASIC1.37□□□□□ -2.19
SNRNP200O75643 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC1.37□□□□□ -2.19
SNRNP200O75643 RN7SL274P-201ENST00000492268 272 ntBASIC1.37□□□□□ -2.19
SNRNP200O75643 MTCYBP18-201ENST00000501056 747 ntBASIC1.37□□□□□ -2.19
SNRNP200O75643 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
SNRNP200O75643 RNU5F-8P-201ENST00000515941 111 ntBASIC1.37□□□□□ -2.19
SNRNP200O75643 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.37□□□□□ -2.19
SNRNP200O75643 AL109918.3-201ENST00000603072 338 ntBASIC1.37□□□□□ -2.19
SNRNP200O75643 HSPE1P7-201ENST00000604681 321 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms