Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC5.13□□□□□ -1.59
PRPF40AO75400 AC005154.2-201ENST00000438110 379 ntBASIC5.13□□□□□ -1.59
PRPF40AO75400 LAMTOR5P1-201ENST00000444290 270 ntBASIC5.13□□□□□ -1.59
PRPF40AO75400 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC5.13□□□□□ -1.59
PRPF40AO75400 RPS29P33-201ENST00000456717 146 ntBASIC5.13□□□□□ -1.59
PRPF40AO75400 RPL30P15-201ENST00000457129 321 ntBASIC5.13□□□□□ -1.59
PRPF40AO75400 RNU7-152P-201ENST00000458982 64 ntBASIC5.13□□□□□ -1.59
PRPF40AO75400 RPL21P41-201ENST00000459863 264 ntBASIC5.13□□□□□ -1.59
PRPF40AO75400 RN7SL738P-201ENST00000470264 297 ntBASIC5.13□□□□□ -1.59
PRPF40AO75400 AC117503.1-201ENST00000472241 394 ntBASIC5.13□□□□□ -1.59
PRPF40AO75400 AC090096.1-201ENST00000489168 390 ntBASIC5.13□□□□□ -1.59
PRPF40AO75400 AC093303.1-201ENST00000514549 295 ntBASIC5.13□□□□□ -1.59
PRPF40AO75400 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC5.13□□□□□ -1.59
PRPF40AO75400 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC5.13□□□□□ -1.59
PRPF40AO75400 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.13□□□□□ -1.59
PRPF40AO75400 AC022968.1-201ENST00000567372 442 ntBASIC5.13□□□□□ -1.59
PRPF40AO75400 AL162730.1-201ENST00000605734 292 ntBASIC5.13□□□□□ -1.59
PRPF40AO75400 AC034102.8-201ENST00000615146 484 ntBASIC5.13□□□□□ -1.59
PRPF40AO75400 AL360181.4-201ENST00000621752 134 ntBASIC5.13□□□□□ -1.59
PRPF40AO75400 AL136964.1-201ENST00000622038 2990 ntBASIC5.13□□□□□ -1.59
PRPF40AO75400 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
PRPF40AO75400 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
PRPF40AO75400 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.13□□□□□ -1.59
PRPF40AO75400 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PRPF40AO75400 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC5.13□□□□□ -1.59
PRPF40AO75400 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
PRPF40AO75400 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
PRPF40AO75400 OR4G2P-202ENST00000641004 1759 ntBASIC5.12□□□□□ -1.59
PRPF40AO75400 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
PRPF40AO75400 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PRPF40AO75400 DEFB108F-201ENST00000344638 222 ntBASIC5.12□□□□□ -1.59
PRPF40AO75400 RNU6-1188P-201ENST00000363795 107 ntBASIC5.12□□□□□ -1.59
PRPF40AO75400 Y_RNA.187-201ENST00000363918 113 ntBASIC5.12□□□□□ -1.59
PRPF40AO75400 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PRPF40AO75400 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
PRPF40AO75400 MIR192-201ENST00000384915 110 ntBASIC5.12□□□□□ -1.59
PRPF40AO75400 MIR298-201ENST00000401212 88 ntBASIC5.12□□□□□ -1.59
PRPF40AO75400 AL391417.1-201ENST00000404100 426 ntBASIC5.12□□□□□ -1.59
PRPF40AO75400 AL139397.2-201ENST00000404529 772 ntBASIC5.12□□□□□ -1.59
PRPF40AO75400 MIR1911-201ENST00000410783 80 ntBASIC5.12□□□□□ -1.59
PRPF40AO75400 SNORA74C-2-201ENST00000411179 201 ntBASIC5.12□□□□□ -1.59
PRPF40AO75400 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC5.12□□□□□ -1.59
PRPF40AO75400 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.12□□□□□ -1.59
PRPF40AO75400 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC5.12□□□□□ -1.59
PRPF40AO75400 AL353748.1-201ENST00000440753 474 ntBASIC5.12□□□□□ -1.59
PRPF40AO75400 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.12□□□□□ -1.59
PRPF40AO75400 AC073264.2-201ENST00000448886 166 ntBASIC5.12□□□□□ -1.59
PRPF40AO75400 ABCF2P2-201ENST00000450549 296 ntBASIC5.12□□□□□ -1.59
PRPF40AO75400 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC5.12□□□□□ -1.59
PRPF40AO75400 RPS15AP34-201ENST00000487776 387 ntBASIC5.12□□□□□ -1.59
PRPF40AO75400 AC079140.5-201ENST00000507882 310 ntBASIC5.12□□□□□ -1.59
PRPF40AO75400 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC5.12□□□□□ -1.59
PRPF40AO75400 SNRPGP16-201ENST00000533275 226 ntBASIC5.12□□□□□ -1.59
PRPF40AO75400 AL110118.1-201ENST00000553543 400 ntBASIC5.12□□□□□ -1.59
PRPF40AO75400 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.12□□□□□ -1.59
PRPF40AO75400 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PRPF40AO75400 AL592182.3-201ENST00000642132 3304 ntBASIC5.12□□□□□ -1.59
PRPF40AO75400 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC5.12□□□□□ -1.59
PRPF40AO75400 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
PRPF40AO75400 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
PRPF40AO75400 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC5.12□□□□□ -1.59
PRPF40AO75400 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
PRPF40AO75400 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PRPF40AO75400 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PRPF40AO75400 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.12□□□□□ -1.59
PRPF40AO75400 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PRPF40AO75400 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
PRPF40AO75400 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
PRPF40AO75400 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
PRPF40AO75400 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC5.11□□□□□ -1.59
PRPF40AO75400 RNU6-593P-201ENST00000364716 112 ntBASIC5.11□□□□□ -1.59
PRPF40AO75400 Y_RNA.422-201ENST00000384054 114 ntBASIC5.11□□□□□ -1.59
PRPF40AO75400 MIR514A1-201ENST00000385133 98 ntBASIC5.11□□□□□ -1.59
PRPF40AO75400 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
PRPF40AO75400 AL445189.1-201ENST00000405722 338 ntBASIC5.11□□□□□ -1.59
PRPF40AO75400 RPS16P5-201ENST00000406501 404 ntBASIC5.11□□□□□ -1.59
PRPF40AO75400 RNA5SP104-201ENST00000410989 118 ntBASIC5.11□□□□□ -1.59
PRPF40AO75400 RPL21P90-201ENST00000415692 466 ntBASIC5.11□□□□□ -1.59
PRPF40AO75400 RPS12P10-201ENST00000427031 377 ntBASIC5.11□□□□□ -1.59
PRPF40AO75400 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.11□□□□□ -1.59
PRPF40AO75400 RPL23AP31-201ENST00000456160 467 ntBASIC5.11□□□□□ -1.59
PRPF40AO75400 RPL31P60-201ENST00000478450 367 ntBASIC5.11□□□□□ -1.59
PRPF40AO75400 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC5.11□□□□□ -1.59
PRPF40AO75400 RNU6-143P-201ENST00000516942 93 ntBASIC5.11□□□□□ -1.59
PRPF40AO75400 AC087854.1-201ENST00000519706 414 ntBASIC5.11□□□□□ -1.59
PRPF40AO75400 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.11□□□□□ -1.59
PRPF40AO75400 AP006289.1-201ENST00000538089 277 ntBASIC5.11□□□□□ -1.59
PRPF40AO75400 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.11□□□□□ -1.59
PRPF40AO75400 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC5.11□□□□□ -1.59
PRPF40AO75400 AC069061.3-201ENST00000582254 823 ntBASIC5.11□□□□□ -1.59
PRPF40AO75400 SNRPGP17-201ENST00000603780 214 ntBASIC5.11□□□□□ -1.59
PRPF40AO75400 MIR6780A-201ENST00000615089 68 ntBASIC5.11□□□□□ -1.59
PRPF40AO75400 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC5.11□□□□□ -1.59
PRPF40AO75400 MIR6853-201ENST00000619642 74 ntBASIC5.11□□□□□ -1.59
PRPF40AO75400 AL023881.1-201ENST00000621088 301 ntBASIC5.11□□□□□ -1.59
PRPF40AO75400 AC244517.12-201ENST00000623581 663 ntBASIC5.11□□□□□ -1.59
PRPF40AO75400 AC067931.1-201ENST00000624190 671 ntBASIC5.11□□□□□ -1.59
PRPF40AO75400 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.11□□□□□ -1.59
PRPF40AO75400 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PRPF40AO75400 AC074029.4-201ENST00000624796 1859 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms