Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.37□□□□□ -1.87
LDB3O75112 AC034229.5-201ENST00000624258 185 ntBASIC3.37□□□□□ -1.87
LDB3O75112 AL159972.1-201ENST00000625150 448 ntBASIC3.37□□□□□ -1.87
LDB3O75112 AL353746.1-201ENST00000566293 6881 ntBASIC3.37□□□□□ -1.87
LDB3O75112 MTCO1P9-201ENST00000505577 1534 ntBASIC3.37□□□□□ -1.87
LDB3O75112 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LDB3O75112 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
LDB3O75112 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.37□□□□□ -1.87
LDB3O75112 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.37□□□□□ -1.87
LDB3O75112 AL138713.1-201ENST00000624026 2130 ntBASIC3.37□□□□□ -1.87
LDB3O75112 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.36□□□□□ -1.87
LDB3O75112 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
LDB3O75112 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LDB3O75112 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LDB3O75112 RNY4P16-201ENST00000364768 94 ntBASIC3.36□□□□□ -1.87
LDB3O75112 RNU6-169P-201ENST00000365336 107 ntBASIC3.36□□□□□ -1.87
LDB3O75112 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LDB3O75112 RNU6-1158P-201ENST00000391167 107 ntBASIC3.36□□□□□ -1.87
LDB3O75112 RPS4XP8-201ENST00000402039 771 ntBASIC3.36□□□□□ -1.87
LDB3O75112 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.36□□□□□ -1.87
LDB3O75112 RNU6-1068P-201ENST00000410958 103 ntBASIC3.36□□□□□ -1.87
LDB3O75112 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.36□□□□□ -1.87
LDB3O75112 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
LDB3O75112 RPS20P20-201ENST00000460498 340 ntBASIC3.36□□□□□ -1.87
LDB3O75112 VN1R17P-201ENST00000472048 1090 ntBASIC3.36□□□□□ -1.87
LDB3O75112 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.36□□□□□ -1.87
LDB3O75112 HMGN1P10-201ENST00000474557 553 ntBASIC3.36□□□□□ -1.87
LDB3O75112 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.36□□□□□ -1.87
LDB3O75112 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.36□□□□□ -1.87
LDB3O75112 AC022616.3-201ENST00000523940 148 ntBASIC3.36□□□□□ -1.87
LDB3O75112 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.36□□□□□ -1.87
LDB3O75112 OR5B19P-201ENST00000531766 928 ntBASIC3.36□□□□□ -1.87
LDB3O75112 AP003034.1-201ENST00000534621 422 ntBASIC3.36□□□□□ -1.87
LDB3O75112 AC093027.1-201ENST00000546698 429 ntBASIC3.36□□□□□ -1.87
LDB3O75112 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.36□□□□□ -1.87
LDB3O75112 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.36□□□□□ -1.87
LDB3O75112 MIR3146-201ENST00000580367 79 ntBASIC3.36□□□□□ -1.87
LDB3O75112 SNORD84-203ENST00000584275 78 ntBASIC3.36□□□□□ -1.87
LDB3O75112 KC877982.1-201ENST00000602313 470 ntBASIC3.36□□□□□ -1.87
LDB3O75112 AL162413.1-201ENST00000603198 110 ntBASIC3.36□□□□□ -1.87
LDB3O75112 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.36□□□□□ -1.87
LDB3O75112 BNIP3P10-201ENST00000605360 577 ntBASIC3.36□□□□□ -1.87
LDB3O75112 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.36□□□□□ -1.87
LDB3O75112 AC006023.2-201ENST00000609916 167 ntBASIC3.36□□□□□ -1.87
LDB3O75112 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.36□□□□□ -1.87
LDB3O75112 AC006133.1-201ENST00000617106 264 ntBASIC3.36□□□□□ -1.87
LDB3O75112 AC006504.8-201ENST00000621046 635 ntBASIC3.36□□□□□ -1.87
LDB3O75112 AL136221.1-201ENST00000621449 509 ntBASIC3.36□□□□□ -1.87
LDB3O75112 U4.6-201ENST00000621618 127 ntBASIC3.36□□□□□ -1.87
LDB3O75112 AC093648.1-201ENST00000623546 606 ntBASIC3.36□□□□□ -1.87
LDB3O75112 AC112204.3-201ENST00000623822 332 ntBASIC3.36□□□□□ -1.87
LDB3O75112 AC048347.1-201ENST00000624621 427 ntBASIC3.36□□□□□ -1.87
LDB3O75112 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.36□□□□□ -1.87
LDB3O75112 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.36□□□□□ -1.87
LDB3O75112 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.36□□□□□ -1.87
LDB3O75112 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LDB3O75112 AC008725.1-201ENST00000605123 2263 ntBASIC3.36□□□□□ -1.87
LDB3O75112 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LDB3O75112 AC010733.2-201ENST00000589496 5702 ntBASIC3.36□□□□□ -1.87
LDB3O75112 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LDB3O75112 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LDB3O75112 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
LDB3O75112 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LDB3O75112 ZNF680P1-201ENST00000436625 1469 ntBASIC3.35□□□□□ -1.87
LDB3O75112 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LDB3O75112 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.35□□□□□ -1.87
LDB3O75112 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LDB3O75112 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LDB3O75112 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
LDB3O75112 RNA5SP42-201ENST00000364278 115 ntBASIC3.35□□□□□ -1.87
LDB3O75112 XGY1-201ENST00000381172 446 ntBASIC3.35□□□□□ -1.87
LDB3O75112 RNU6-456P-201ENST00000384493 107 ntBASIC3.35□□□□□ -1.87
LDB3O75112 MIR19A-201ENST00000384878 82 ntBASIC3.35□□□□□ -1.87
LDB3O75112 RNU2-9P-201ENST00000410194 145 ntBASIC3.35□□□□□ -1.87
LDB3O75112 MTATP6P18-201ENST00000417994 673 ntBASIC3.35□□□□□ -1.87
LDB3O75112 OR1AA1P-201ENST00000419597 916 ntBASIC3.35□□□□□ -1.87
LDB3O75112 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.35□□□□□ -1.87
LDB3O75112 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.35□□□□□ -1.87
LDB3O75112 AC002075.2-201ENST00000425207 252 ntBASIC3.35□□□□□ -1.87
LDB3O75112 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.35□□□□□ -1.87
LDB3O75112 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.35□□□□□ -1.87
LDB3O75112 AC007677.1-201ENST00000445757 515 ntBASIC3.35□□□□□ -1.87
LDB3O75112 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.35□□□□□ -1.87
LDB3O75112 AC234775.1-201ENST00000454247 670 ntBASIC3.35□□□□□ -1.87
LDB3O75112 ANP32BP2-201ENST00000454525 545 ntBASIC3.35□□□□□ -1.87
LDB3O75112 AC084357.1-201ENST00000473404 255 ntBASIC3.35□□□□□ -1.87
LDB3O75112 AC106707.2-201ENST00000484182 374 ntBASIC3.35□□□□□ -1.87
LDB3O75112 RPL36AP51-201ENST00000487216 318 ntBASIC3.35□□□□□ -1.87
LDB3O75112 AC023194.1-201ENST00000493084 308 ntBASIC3.35□□□□□ -1.87
LDB3O75112 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.35□□□□□ -1.87
LDB3O75112 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.35□□□□□ -1.87
LDB3O75112 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LDB3O75112 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.35□□□□□ -1.87
LDB3O75112 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.35□□□□□ -1.87
LDB3O75112 SCARNA15.1-201ENST00000516384 125 ntBASIC3.35□□□□□ -1.87
LDB3O75112 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LDB3O75112 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC3.35□□□□□ -1.87
LDB3O75112 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.35□□□□□ -1.87
LDB3O75112 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.35□□□□□ -1.87
LDB3O75112 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms