Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AC099677.1-201ENST00000420575 175 ntBASIC3.14□□□□□ -1.91
PRKNO60260 AC005019.1-201ENST00000436455 431 ntBASIC3.14□□□□□ -1.91
PRKNO60260 MRPS31P2-201ENST00000451581 518 ntBASIC3.14□□□□□ -1.91
PRKNO60260 AC092989.1-201ENST00000481235 277 ntBASIC3.14□□□□□ -1.91
PRKNO60260 AC079382.1-201ENST00000493346 557 ntBASIC3.14□□□□□ -1.91
PRKNO60260 AC019235.1-201ENST00000503847 207 ntBASIC3.14□□□□□ -1.91
PRKNO60260 ARL4AP2-201ENST00000507378 601 ntBASIC3.14□□□□□ -1.91
PRKNO60260 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.14□□□□□ -1.91
PRKNO60260 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.14□□□□□ -1.91
PRKNO60260 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.14□□□□□ -1.91
PRKNO60260 NDUFB9P3-201ENST00000521269 501 ntBASIC3.14□□□□□ -1.91
PRKNO60260 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.14□□□□□ -1.91
PRKNO60260 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.14□□□□□ -1.91
PRKNO60260 AC018630.1-201ENST00000541376 925 ntBASIC3.14□□□□□ -1.91
PRKNO60260 AC011611.1-201ENST00000552179 197 ntBASIC3.14□□□□□ -1.91
PRKNO60260 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.14□□□□□ -1.91
PRKNO60260 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.14□□□□□ -1.91
PRKNO60260 AC012507.3-201ENST00000603556 477 ntBASIC3.14□□□□□ -1.91
PRKNO60260 AC093838.1-201ENST00000613014 469 ntBASIC3.14□□□□□ -1.91
PRKNO60260 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.14□□□□□ -1.91
PRKNO60260 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.14□□□□□ -1.91
PRKNO60260 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PRKNO60260 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.13□□□□□ -1.91
PRKNO60260 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PRKNO60260 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
PRKNO60260 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PRKNO60260 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
PRKNO60260 MIR30E-201ENST00000362104 92 ntBASIC3.13□□□□□ -1.91
PRKNO60260 Y_RNA.9-201ENST00000362354 101 ntBASIC3.13□□□□□ -1.91
PRKNO60260 SNORD56.2-201ENST00000363242 71 ntBASIC3.13□□□□□ -1.91
PRKNO60260 RNU6-335P-201ENST00000364563 113 ntBASIC3.13□□□□□ -1.91
PRKNO60260 RNU6-39P-201ENST00000384344 107 ntBASIC3.13□□□□□ -1.91
PRKNO60260 PTMAP5-201ENST00000393073 333 ntBASIC3.13□□□□□ -1.91
PRKNO60260 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PRKNO60260 AL109755.1-201ENST00000401791 649 ntBASIC3.13□□□□□ -1.91
PRKNO60260 SNORA11.1-201ENST00000408133 129 ntBASIC3.13□□□□□ -1.91
PRKNO60260 AC009237.5-201ENST00000414271 501 ntBASIC3.13□□□□□ -1.91
PRKNO60260 MTCO3P12-201ENST00000416718 547 ntBASIC3.13□□□□□ -1.91
PRKNO60260 TIMM9P3-201ENST00000428659 274 ntBASIC3.13□□□□□ -1.91
PRKNO60260 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.13□□□□□ -1.91
PRKNO60260 AC004866.2-201ENST00000438285 481 ntBASIC3.13□□□□□ -1.91
PRKNO60260 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.13□□□□□ -1.91
PRKNO60260 MTATP6P30-201ENST00000443540 664 ntBASIC3.13□□□□□ -1.91
PRKNO60260 AL136097.1-201ENST00000456945 913 ntBASIC3.13□□□□□ -1.91
PRKNO60260 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.13□□□□□ -1.91
PRKNO60260 RPL21P13-201ENST00000488305 481 ntBASIC3.13□□□□□ -1.91
PRKNO60260 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.13□□□□□ -1.91
PRKNO60260 FCF1P8-201ENST00000510322 597 ntBASIC3.13□□□□□ -1.91
PRKNO60260 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.13□□□□□ -1.91
PRKNO60260 SCARNA24.1-201ENST00000516465 137 ntBASIC3.13□□□□□ -1.91
PRKNO60260 Y_RNA.704-201ENST00000516851 102 ntBASIC3.13□□□□□ -1.91
PRKNO60260 MIR2276-201ENST00000516886 89 ntBASIC3.13□□□□□ -1.91
PRKNO60260 SNORA31.20-201ENST00000517111 133 ntBASIC3.13□□□□□ -1.91
PRKNO60260 AC090572.1-201ENST00000519251 160 ntBASIC3.13□□□□□ -1.91
PRKNO60260 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PRKNO60260 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.13□□□□□ -1.91
PRKNO60260 AK6P1-201ENST00000540219 478 ntBASIC3.13□□□□□ -1.91
PRKNO60260 AC092325.1-201ENST00000566449 554 ntBASIC3.13□□□□□ -1.91
PRKNO60260 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.13□□□□□ -1.91
PRKNO60260 AL606834.2-201ENST00000602954 668 ntBASIC3.13□□□□□ -1.91
PRKNO60260 AL022099.1-201ENST00000604551 712 ntBASIC3.13□□□□□ -1.91
PRKNO60260 AC103710.2-201ENST00000609912 942 ntBASIC3.13□□□□□ -1.91
PRKNO60260 AC096577.2-201ENST00000611455 153 ntBASIC3.13□□□□□ -1.91
PRKNO60260 AC007014.2-201ENST00000615581 479 ntBASIC3.13□□□□□ -1.91
PRKNO60260 MIR8058-201ENST00000615737 89 ntBASIC3.13□□□□□ -1.91
PRKNO60260 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
PRKNO60260 MIR6130-201ENST00000619419 109 ntBASIC3.13□□□□□ -1.91
PRKNO60260 AL353748.2-201ENST00000622148 471 ntBASIC3.13□□□□□ -1.91
PRKNO60260 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.13□□□□□ -1.91
PRKNO60260 AC139792.3-201ENST00000623525 224 ntBASIC3.13□□□□□ -1.91
PRKNO60260 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
PRKNO60260 HSPA8P1-201ENST00000425843 1833 ntBASIC3.13□□□□□ -1.91
PRKNO60260 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PRKNO60260 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
PRKNO60260 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PRKNO60260 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.13□□□□□ -1.91
PRKNO60260 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PRKNO60260 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PRKNO60260 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.12□□□□□ -1.91
PRKNO60260 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
PRKNO60260 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PRKNO60260 RNU6-1085P-201ENST00000363576 107 ntBASIC3.12□□□□□ -1.91
PRKNO60260 SNORA7.2-201ENST00000364446 145 ntBASIC3.12□□□□□ -1.91
PRKNO60260 U3.11-201ENST00000364476 212 ntBASIC3.12□□□□□ -1.91
PRKNO60260 Y_RNA.256-201ENST00000364594 104 ntBASIC3.12□□□□□ -1.91
PRKNO60260 Y_RNA.333-201ENST00000365274 102 ntBASIC3.12□□□□□ -1.91
PRKNO60260 Y_RNA.381-201ENST00000365666 102 ntBASIC3.12□□□□□ -1.91
PRKNO60260 Y_RNA.450-201ENST00000384198 113 ntBASIC3.12□□□□□ -1.91
PRKNO60260 MIR607-201ENST00000385241 96 ntBASIC3.12□□□□□ -1.91
PRKNO60260 RNU6-882P-201ENST00000391025 103 ntBASIC3.12□□□□□ -1.91
PRKNO60260 AC068050.1-201ENST00000394891 380 ntBASIC3.12□□□□□ -1.91
PRKNO60260 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PRKNO60260 Z98941.1-201ENST00000407764 100 ntBASIC3.12□□□□□ -1.91
PRKNO60260 RPL21P24-201ENST00000413752 448 ntBASIC3.12□□□□□ -1.91
PRKNO60260 MTATP6P18-201ENST00000417994 673 ntBASIC3.12□□□□□ -1.91
PRKNO60260 AL353193.1-201ENST00000421444 268 ntBASIC3.12□□□□□ -1.91
PRKNO60260 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.12□□□□□ -1.91
PRKNO60260 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.12□□□□□ -1.91
PRKNO60260 ELOCP14-201ENST00000428070 331 ntBASIC3.12□□□□□ -1.91
PRKNO60260 AC005326.1-201ENST00000429197 123 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms