Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 NRBF2P1-201ENST00000587407 859 ntBASIC3.16□□□□□ -1.9
SSX4O60224 DPPA3P3-201ENST00000603842 430 ntBASIC3.16□□□□□ -1.9
SSX4O60224 AC103591.3-201ENST00000608684 209 ntBASIC3.16□□□□□ -1.9
SSX4O60224 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.16□□□□□ -1.9
SSX4O60224 AC008498.1-201ENST00000613012 531 ntBASIC3.16□□□□□ -1.9
SSX4O60224 AC011939.3-201ENST00000613686 466 ntBASIC3.16□□□□□ -1.9
SSX4O60224 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.16□□□□□ -1.9
SSX4O60224 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SSX4O60224 AC073346.2-201ENST00000624724 2058 ntBASIC3.16□□□□□ -1.9
SSX4O60224 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SSX4O60224 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.16□□□□□ -1.9
SSX4O60224 AC068647.1-201ENST00000489539 2265 ntBASIC3.16□□□□□ -1.9
SSX4O60224 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
SSX4O60224 SNORD56.3-201ENST00000363507 71 ntBASIC3.15□□□□□ -1.91
SSX4O60224 RNA5SP50-201ENST00000363731 107 ntBASIC3.15□□□□□ -1.91
SSX4O60224 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SSX4O60224 RN7SKP53-201ENST00000411337 315 ntBASIC3.15□□□□□ -1.91
SSX4O60224 AL513331.1-201ENST00000411908 397 ntBASIC3.15□□□□□ -1.91
SSX4O60224 BX295541.1-201ENST00000417774 250 ntBASIC3.15□□□□□ -1.91
SSX4O60224 MORF4L1P6-201ENST00000418771 268 ntBASIC3.15□□□□□ -1.91
SSX4O60224 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.15□□□□□ -1.91
SSX4O60224 AC012498.1-201ENST00000424037 437 ntBASIC3.15□□□□□ -1.91
SSX4O60224 USP9YP36-201ENST00000424581 829 ntBASIC3.15□□□□□ -1.91
SSX4O60224 AL590383.1-201ENST00000428602 75 ntBASIC3.15□□□□□ -1.91
SSX4O60224 ARPC3P1-201ENST00000437218 533 ntBASIC3.15□□□□□ -1.91
SSX4O60224 AC009237.8-201ENST00000445492 379 ntBASIC3.15□□□□□ -1.91
SSX4O60224 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.15□□□□□ -1.91
SSX4O60224 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.15□□□□□ -1.91
SSX4O60224 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.15□□□□□ -1.91
SSX4O60224 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.15□□□□□ -1.91
SSX4O60224 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SSX4O60224 MTCO3P7-201ENST00000510008 774 ntBASIC3.15□□□□□ -1.91
SSX4O60224 AC010265.1-201ENST00000513509 211 ntBASIC3.15□□□□□ -1.91
SSX4O60224 RNU2-10P-201ENST00000516375 211 ntBASIC3.15□□□□□ -1.91
SSX4O60224 Vault.3-201ENST00000516676 95 ntBASIC3.15□□□□□ -1.91
SSX4O60224 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.15□□□□□ -1.91
SSX4O60224 AC022616.3-201ENST00000523940 148 ntBASIC3.15□□□□□ -1.91
SSX4O60224 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.15□□□□□ -1.91
SSX4O60224 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.15□□□□□ -1.91
SSX4O60224 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.15□□□□□ -1.91
SSX4O60224 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.15□□□□□ -1.91
SSX4O60224 MIR3167-201ENST00000579623 85 ntBASIC3.15□□□□□ -1.91
SSX4O60224 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.15□□□□□ -1.91
SSX4O60224 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.15□□□□□ -1.91
SSX4O60224 AC109347.2-201ENST00000610220 349 ntBASIC3.15□□□□□ -1.91
SSX4O60224 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.15□□□□□ -1.91
SSX4O60224 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SSX4O60224 CUL1P1-201ENST00000509510 2425 ntBASIC3.15□□□□□ -1.91
SSX4O60224 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.15□□□□□ -1.91
SSX4O60224 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
SSX4O60224 MTND5P27-201ENST00000428871 1720 ntBASIC3.15□□□□□ -1.91
SSX4O60224 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.15□□□□□ -1.91
SSX4O60224 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.14□□□□□ -1.91
SSX4O60224 SRP72P2-201ENST00000344851 1979 ntBASIC3.14□□□□□ -1.91
SSX4O60224 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
SSX4O60224 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.14□□□□□ -1.91
SSX4O60224 SNORD56.2-201ENST00000363242 71 ntBASIC3.14□□□□□ -1.91
SSX4O60224 SNORA20.2-201ENST00000383922 131 ntBASIC3.14□□□□□ -1.91
SSX4O60224 SNORA9-201ENST00000384215 133 ntBASIC3.14□□□□□ -1.91
SSX4O60224 Y_RNA.559-201ENST00000384686 107 ntBASIC3.14□□□□□ -1.91
SSX4O60224 RNVU1-14-201ENST00000384770 164 ntBASIC3.14□□□□□ -1.91
SSX4O60224 FAT1P1-201ENST00000406588 507 ntBASIC3.14□□□□□ -1.91
SSX4O60224 AL663109.1-201ENST00000411498 844 ntBASIC3.14□□□□□ -1.91
SSX4O60224 ATP5A1P2-201ENST00000412323 255 ntBASIC3.14□□□□□ -1.91
SSX4O60224 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.14□□□□□ -1.91
SSX4O60224 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.14□□□□□ -1.91
SSX4O60224 TMEM167AP1-201ENST00000423409 219 ntBASIC3.14□□□□□ -1.91
SSX4O60224 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.14□□□□□ -1.91
SSX4O60224 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.14□□□□□ -1.91
SSX4O60224 DLGAP5P1-201ENST00000430307 464 ntBASIC3.14□□□□□ -1.91
SSX4O60224 RPL31P35-201ENST00000431058 377 ntBASIC3.14□□□□□ -1.91
SSX4O60224 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.14□□□□□ -1.91
SSX4O60224 HIGD1AP11-201ENST00000438361 280 ntBASIC3.14□□□□□ -1.91
SSX4O60224 CBWD4P-201ENST00000445695 655 ntBASIC3.14□□□□□ -1.91
SSX4O60224 MTCO2P7-201ENST00000446518 666 ntBASIC3.14□□□□□ -1.91
SSX4O60224 RPL21P23-201ENST00000446654 460 ntBASIC3.14□□□□□ -1.91
SSX4O60224 SNRPGP6-201ENST00000451124 220 ntBASIC3.14□□□□□ -1.91
SSX4O60224 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.14□□□□□ -1.91
SSX4O60224 SNORD97-201ENST00000459187 142 ntBASIC3.14□□□□□ -1.91
SSX4O60224 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.14□□□□□ -1.91
SSX4O60224 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.14□□□□□ -1.91
SSX4O60224 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SSX4O60224 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.14□□□□□ -1.91
SSX4O60224 MTND1P15-201ENST00000579262 949 ntBASIC3.14□□□□□ -1.91
SSX4O60224 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
SSX4O60224 AC002545.1-201ENST00000592511 181 ntBASIC3.14□□□□□ -1.91
SSX4O60224 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.14□□□□□ -1.91
SSX4O60224 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.14□□□□□ -1.91
SSX4O60224 AL160281.1-201ENST00000605307 311 ntBASIC3.14□□□□□ -1.91
SSX4O60224 AC008962.1-201ENST00000605729 304 ntBASIC3.14□□□□□ -1.91
SSX4O60224 SNORA62.6-201ENST00000606322 83 ntBASIC3.14□□□□□ -1.91
SSX4O60224 AL161734.1-201ENST00000609720 557 ntBASIC3.14□□□□□ -1.91
SSX4O60224 AL589743.7-201ENST00000612637 233 ntBASIC3.14□□□□□ -1.91
SSX4O60224 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.14□□□□□ -1.91
SSX4O60224 MIR7975-201ENST00000619350 68 ntBASIC3.14□□□□□ -1.91
SSX4O60224 AL392088.2-201ENST00000637607 285 ntBASIC3.14□□□□□ -1.91
SSX4O60224 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.13□□□□□ -1.91
SSX4O60224 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SSX4O60224 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SSX4O60224 RNU5E-6P-201ENST00000365574 115 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms