Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.88□□□□□ -1.79
PHGDHO43175 OR6C66P-201ENST00000414917 930 ntBASIC3.88□□□□□ -1.79
PHGDHO43175 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.88□□□□□ -1.79
PHGDHO43175 YPEL5P1-201ENST00000419731 367 ntBASIC3.88□□□□□ -1.79
PHGDHO43175 RPL7P46-201ENST00000425129 740 ntBASIC3.88□□□□□ -1.79
PHGDHO43175 AC007919.1-201ENST00000429380 217 ntBASIC3.88□□□□□ -1.79
PHGDHO43175 MTCO3P18-201ENST00000440206 761 ntBASIC3.88□□□□□ -1.79
PHGDHO43175 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.88□□□□□ -1.79
PHGDHO43175 TPT1P12-201ENST00000448968 492 ntBASIC3.88□□□□□ -1.79
PHGDHO43175 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.88□□□□□ -1.79
PHGDHO43175 ELOCP23-201ENST00000452014 332 ntBASIC3.88□□□□□ -1.79
PHGDHO43175 SNRPFP3-201ENST00000457792 225 ntBASIC3.88□□□□□ -1.79
PHGDHO43175 RPS20P22-201ENST00000473700 357 ntBASIC3.88□□□□□ -1.79
PHGDHO43175 RPS29P25-201ENST00000481709 171 ntBASIC3.88□□□□□ -1.79
PHGDHO43175 FCF1P3-201ENST00000496394 590 ntBASIC3.88□□□□□ -1.79
PHGDHO43175 EIF4EP3-201ENST00000498782 656 ntBASIC3.88□□□□□ -1.79
PHGDHO43175 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.88□□□□□ -1.79
PHGDHO43175 AC117522.3-201ENST00000507974 584 ntBASIC3.88□□□□□ -1.79
PHGDHO43175 AC098591.2-201ENST00000510152 315 ntBASIC3.88□□□□□ -1.79
PHGDHO43175 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.88□□□□□ -1.79
PHGDHO43175 RNU6-358P-201ENST00000516564 75 ntBASIC3.88□□□□□ -1.79
PHGDHO43175 RNA5SP179-201ENST00000517284 121 ntBASIC3.88□□□□□ -1.79
PHGDHO43175 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.88□□□□□ -1.79
PHGDHO43175 AC087369.1-201ENST00000520775 996 ntBASIC3.88□□□□□ -1.79
PHGDHO43175 SUB1P1-201ENST00000524415 382 ntBASIC3.88□□□□□ -1.79
PHGDHO43175 AC091516.1-201ENST00000549191 703 ntBASIC3.88□□□□□ -1.79
PHGDHO43175 AC007424.1-203ENST00000554613 687 ntBASIC3.88□□□□□ -1.79
PHGDHO43175 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.88□□□□□ -1.79
PHGDHO43175 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.88□□□□□ -1.79
PHGDHO43175 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.88□□□□□ -1.79
PHGDHO43175 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PHGDHO43175 MIR548S-201ENST00000581352 82 ntBASIC3.88□□□□□ -1.79
PHGDHO43175 AC013553.2-201ENST00000604244 589 ntBASIC3.88□□□□□ -1.79
PHGDHO43175 AC022893.3-201ENST00000607665 437 ntBASIC3.88□□□□□ -1.79
PHGDHO43175 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.88□□□□□ -1.79
PHGDHO43175 RMST_3.1-201ENST00000611651 109 ntBASIC3.88□□□□□ -1.79
PHGDHO43175 AC099654.14-201ENST00000638599 341 ntBASIC3.88□□□□□ -1.79
PHGDHO43175 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.88□□□□□ -1.79
PHGDHO43175 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
PHGDHO43175 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.88□□□□□ -1.79
PHGDHO43175 HSPA8P1-201ENST00000425843 1833 ntBASIC3.88□□□□□ -1.79
PHGDHO43175 NCAPGP1-201ENST00000505112 1814 ntBASIC3.88□□□□□ -1.79
PHGDHO43175 AC010733.2-201ENST00000589496 5702 ntBASIC3.88□□□□□ -1.79
PHGDHO43175 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PHGDHO43175 MTND4P14-201ENST00000435799 1354 ntBASIC3.88□□□□□ -1.79
PHGDHO43175 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PHGDHO43175 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.87□□□□□ -1.79
PHGDHO43175 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PHGDHO43175 UBE2L2-201ENST00000254302 429 ntBASIC3.87□□□□□ -1.79
PHGDHO43175 AL139276.1-201ENST00000311910 1001 ntBASIC3.87□□□□□ -1.79
PHGDHO43175 RNU6-116P-201ENST00000384042 109 ntBASIC3.87□□□□□ -1.79
PHGDHO43175 RNU6-550P-201ENST00000391057 101 ntBASIC3.87□□□□□ -1.79
PHGDHO43175 AL139397.2-201ENST00000404529 772 ntBASIC3.87□□□□□ -1.79
PHGDHO43175 AL606923.1-201ENST00000406616 190 ntBASIC3.87□□□□□ -1.79
PHGDHO43175 AC245054.1-201ENST00000420944 258 ntBASIC3.87□□□□□ -1.79
PHGDHO43175 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.87□□□□□ -1.79
PHGDHO43175 AC009237.8-201ENST00000445492 379 ntBASIC3.87□□□□□ -1.79
PHGDHO43175 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.87□□□□□ -1.79
PHGDHO43175 HMGN2P16-201ENST00000456802 261 ntBASIC3.87□□□□□ -1.79
PHGDHO43175 AC087588.1-201ENST00000462203 316 ntBASIC3.87□□□□□ -1.79
PHGDHO43175 RPL21P8-201ENST00000465083 535 ntBASIC3.87□□□□□ -1.79
PHGDHO43175 RPS23P7-201ENST00000466210 444 ntBASIC3.87□□□□□ -1.79
PHGDHO43175 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.87□□□□□ -1.79
PHGDHO43175 TTC39CP1-201ENST00000512513 755 ntBASIC3.87□□□□□ -1.79
PHGDHO43175 RNU6-685P-201ENST00000517088 95 ntBASIC3.87□□□□□ -1.79
PHGDHO43175 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.87□□□□□ -1.79
PHGDHO43175 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.87□□□□□ -1.79
PHGDHO43175 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PHGDHO43175 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.87□□□□□ -1.79
PHGDHO43175 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.87□□□□□ -1.79
PHGDHO43175 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.87□□□□□ -1.79
PHGDHO43175 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.87□□□□□ -1.79
PHGDHO43175 AC090877.1-201ENST00000561418 344 ntBASIC3.87□□□□□ -1.79
PHGDHO43175 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.87□□□□□ -1.79
PHGDHO43175 MIR3939-201ENST00000582614 106 ntBASIC3.87□□□□□ -1.79
PHGDHO43175 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.87□□□□□ -1.79
PHGDHO43175 AC110741.2-201ENST00000605278 268 ntBASIC3.87□□□□□ -1.79
PHGDHO43175 AC022306.2-201ENST00000617563 647 ntBASIC3.87□□□□□ -1.79
PHGDHO43175 AC079684.1-201ENST00000621405 437 ntBASIC3.87□□□□□ -1.79
PHGDHO43175 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.87□□□□□ -1.79
PHGDHO43175 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.87□□□□□ -1.79
PHGDHO43175 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
PHGDHO43175 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PHGDHO43175 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.87□□□□□ -1.79
PHGDHO43175 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.87□□□□□ -1.79
PHGDHO43175 ASNSP3-201ENST00000451989 1306 ntBASIC3.87□□□□□ -1.79
PHGDHO43175 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PHGDHO43175 AC103710.2-202ENST00000641454 2853 ntBASIC3.87□□□□□ -1.79
PHGDHO43175 CASC19-280ENST00000642102 1351 ntBASIC3.87□□□□□ -1.79
PHGDHO43175 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.87□□□□□ -1.79
PHGDHO43175 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.87□□□□□ -1.79
PHGDHO43175 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.87□□□□□ -1.79
PHGDHO43175 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PHGDHO43175 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PHGDHO43175 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.86□□□□□ -1.79
PHGDHO43175 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PHGDHO43175 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
PHGDHO43175 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PHGDHO43175 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PHGDHO43175 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms