Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
TO15178 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TO15178 RNU6-1042P-201ENST00000384204 107 ntBASIC3.18□□□□□ -1.9
TO15178 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TO15178 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.18□□□□□ -1.9
TO15178 AL359634.1-202ENST00000404721 284 ntBASIC3.18□□□□□ -1.9
TO15178 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.18□□□□□ -1.9
TO15178 RNA5SP293-201ENST00000410527 113 ntBASIC3.18□□□□□ -1.9
TO15178 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.18□□□□□ -1.9
TO15178 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
TO15178 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.18□□□□□ -1.9
TO15178 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.18□□□□□ -1.9
TO15178 AL590383.1-201ENST00000428602 75 ntBASIC3.18□□□□□ -1.9
TO15178 AL031667.1-201ENST00000440222 725 ntBASIC3.18□□□□□ -1.9
TO15178 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.18□□□□□ -1.9
TO15178 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.18□□□□□ -1.9
TO15178 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.18□□□□□ -1.9
TO15178 SNORD97-201ENST00000459187 142 ntBASIC3.18□□□□□ -1.9
TO15178 KLF3P2-201ENST00000465138 268 ntBASIC3.18□□□□□ -1.9
TO15178 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.18□□□□□ -1.9
TO15178 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.18□□□□□ -1.9
TO15178 RN7SKP298-201ENST00000515950 94 ntBASIC3.18□□□□□ -1.9
TO15178 Vault.3-201ENST00000516676 95 ntBASIC3.18□□□□□ -1.9
TO15178 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.18□□□□□ -1.9
TO15178 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.18□□□□□ -1.9
TO15178 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.18□□□□□ -1.9
TO15178 DNAJC8P1-201ENST00000554535 372 ntBASIC3.18□□□□□ -1.9
TO15178 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.18□□□□□ -1.9
TO15178 BNIP3P33-201ENST00000598912 569 ntBASIC3.18□□□□□ -1.9
TO15178 AL161734.1-201ENST00000609720 557 ntBASIC3.18□□□□□ -1.9
TO15178 AC103710.2-201ENST00000609912 942 ntBASIC3.18□□□□□ -1.9
TO15178 HULC.1-201ENST00000612720 240 ntBASIC3.18□□□□□ -1.9
TO15178 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
TO15178 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
TO15178 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TO15178 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.17□□□□□ -1.9
TO15178 RNU4-35P-201ENST00000362588 141 ntBASIC3.17□□□□□ -1.9
TO15178 Y_RNA.559-201ENST00000384686 107 ntBASIC3.17□□□□□ -1.9
TO15178 RN7SKP27-201ENST00000410684 333 ntBASIC3.17□□□□□ -1.9
TO15178 RN7SKP140-201ENST00000411196 284 ntBASIC3.17□□□□□ -1.9
TO15178 ELOCP4-201ENST00000420090 333 ntBASIC3.17□□□□□ -1.9
TO15178 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.17□□□□□ -1.9
TO15178 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.17□□□□□ -1.9
TO15178 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.17□□□□□ -1.9
TO15178 AL158071.1-201ENST00000430315 461 ntBASIC3.17□□□□□ -1.9
TO15178 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC3.17□□□□□ -1.9
TO15178 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.17□□□□□ -1.9
TO15178 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.17□□□□□ -1.9
TO15178 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.17□□□□□ -1.9
TO15178 AL031183.1-201ENST00000457667 207 ntBASIC3.17□□□□□ -1.9
TO15178 RPS4XP2-201ENST00000458402 793 ntBASIC3.17□□□□□ -1.9
TO15178 RPS4XP22-201ENST00000480755 780 ntBASIC3.17□□□□□ -1.9
TO15178 RPL32P34-201ENST00000486380 400 ntBASIC3.17□□□□□ -1.9
TO15178 NRON-201ENST00000517270 370 ntBASIC3.17□□□□□ -1.9
TO15178 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.17□□□□□ -1.9
TO15178 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.17□□□□□ -1.9
TO15178 AC124947.2-202ENST00000552735 133 ntBASIC3.17□□□□□ -1.9
TO15178 AC005951.2-201ENST00000576282 495 ntBASIC3.17□□□□□ -1.9
TO15178 AC012213.3-201ENST00000577199 777 ntBASIC3.17□□□□□ -1.9
TO15178 AC067852.3-201ENST00000589177 561 ntBASIC3.17□□□□□ -1.9
TO15178 AC087683.1-201ENST00000591187 441 ntBASIC3.17□□□□□ -1.9
TO15178 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.17□□□□□ -1.9
TO15178 AC079089.3-201ENST00000603094 673 ntBASIC3.17□□□□□ -1.9
TO15178 AC008739.3-201ENST00000603262 127 ntBASIC3.17□□□□□ -1.9
TO15178 AC245014.2-201ENST00000603689 287 ntBASIC3.17□□□□□ -1.9
TO15178 AC246785.4-201ENST00000605374 287 ntBASIC3.17□□□□□ -1.9
TO15178 AC004832.5-201ENST00000608677 401 ntBASIC3.17□□□□□ -1.9
TO15178 AC103591.3-201ENST00000608684 209 ntBASIC3.17□□□□□ -1.9
TO15178 AC104073.3-201ENST00000610942 955 ntBASIC3.17□□□□□ -1.9
TO15178 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.17□□□□□ -1.9
TO15178 AC008498.1-201ENST00000613012 531 ntBASIC3.17□□□□□ -1.9
TO15178 AL357559.1-201ENST00000622228 274 ntBASIC3.17□□□□□ -1.9
TO15178 AC139792.2-201ENST00000624218 587 ntBASIC3.17□□□□□ -1.9
TO15178 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TO15178 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TO15178 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
TO15178 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
TO15178 RNU6-511P-201ENST00000363496 107 ntBASIC3.16□□□□□ -1.9
TO15178 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TO15178 OR5H15-201ENST00000383696 930 ntBASIC3.16□□□□□ -1.9
TO15178 SNORA20.2-201ENST00000383922 131 ntBASIC3.16□□□□□ -1.9
TO15178 SNORA48.7-201ENST00000391302 135 ntBASIC3.16□□□□□ -1.9
TO15178 SNORA11-201ENST00000408789 128 ntBASIC3.16□□□□□ -1.9
TO15178 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.16□□□□□ -1.9
TO15178 BX842559.1-201ENST00000419615 532 ntBASIC3.16□□□□□ -1.9
TO15178 AL451054.2-201ENST00000420896 202 ntBASIC3.16□□□□□ -1.9
TO15178 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.16□□□□□ -1.9
TO15178 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TO15178 MTCO3P5-201ENST00000433620 714 ntBASIC3.16□□□□□ -1.9
TO15178 AC104850.1-201ENST00000435940 476 ntBASIC3.16□□□□□ -1.9
TO15178 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.16□□□□□ -1.9
TO15178 VN1R34P-201ENST00000447387 883 ntBASIC3.16□□□□□ -1.9
TO15178 GAPDHP27-201ENST00000447427 1020 ntBASIC3.16□□□□□ -1.9
TO15178 MRPS31P2-201ENST00000451581 518 ntBASIC3.16□□□□□ -1.9
TO15178 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.16□□□□□ -1.9
TO15178 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.16□□□□□ -1.9
TO15178 RPL23AP67-201ENST00000465341 474 ntBASIC3.16□□□□□ -1.9
TO15178 RPS26P21-201ENST00000475397 348 ntBASIC3.16□□□□□ -1.9
TO15178 RBM43P1-201ENST00000476891 1081 ntBASIC3.16□□□□□ -1.9
TO15178 AC025518.1-201ENST00000479856 347 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 150.3 ms