Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 RNA5SP62-201ENST00000363457 110 ntBASIC1.91□□□□□ -2.1
CHD1O14646 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.91□□□□□ -2.1
CHD1O14646 AC241520.1-201ENST00000422654 1099 ntBASIC1.91□□□□□ -2.1
CHD1O14646 MTND5P25-201ENST00000430499 799 ntBASIC1.91□□□□□ -2.1
CHD1O14646 RPS27P21-201ENST00000486977 252 ntBASIC1.91□□□□□ -2.1
CHD1O14646 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC1.91□□□□□ -2.1
CHD1O14646 MIR514B-201ENST00000516774 80 ntBASIC1.91□□□□□ -2.1
CHD1O14646 AC024619.4-201ENST00000580924 316 ntBASIC1.91□□□□□ -2.1
CHD1O14646 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC1.91□□□□□ -2.1
CHD1O14646 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC1.91□□□□□ -2.1
CHD1O14646 AC116563.2-201ENST00000624751 535 ntBASIC1.91□□□□□ -2.1
CHD1O14646 AL356118.1-201ENST00000635272 1078 ntBASIC1.91□□□□□ -2.1
CHD1O14646 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.91□□□□□ -2.1
CHD1O14646 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.91□□□□□ -2.1
CHD1O14646 RNA5SP257-201ENST00000363023 116 ntBASIC1.91□□□□□ -2.1
CHD1O14646 MIR216A-201ENST00000385063 110 ntBASIC1.91□□□□□ -2.1
CHD1O14646 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.91□□□□□ -2.1
CHD1O14646 RPL37P6-202ENST00000464216 403 ntBASIC1.91□□□□□ -2.1
CHD1O14646 AC114801.2-201ENST00000503825 781 ntBASIC1.91□□□□□ -2.1
CHD1O14646 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.91□□□□□ -2.1
CHD1O14646 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.91□□□□□ -2.1
CHD1O14646 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.91□□□□□ -2.1
CHD1O14646 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.91□□□□□ -2.1
CHD1O14646 AC090616.5-202ENST00000582111 297 ntBASIC1.91□□□□□ -2.1
CHD1O14646 AL031274.2-201ENST00000599419 203 ntBASIC1.91□□□□□ -2.1
CHD1O14646 AC112191.3-201ENST00000604371 277 ntBASIC1.91□□□□□ -2.1
CHD1O14646 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
CHD1O14646 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.9□□□□□ -2.11
CHD1O14646 AL513343.1-201ENST00000451818 792 ntBASIC1.9□□□□□ -2.11
CHD1O14646 KLRA1P-201ENST00000503499 986 ntBASIC1.9□□□□□ -2.11
CHD1O14646 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.9□□□□□ -2.11
CHD1O14646 MTND3P24-201ENST00000506306 329 ntBASIC1.9□□□□□ -2.11
CHD1O14646 RNA5SP471-201ENST00000516971 106 ntBASIC1.9□□□□□ -2.11
CHD1O14646 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC1.9□□□□□ -2.11
CHD1O14646 AC123912.5-201ENST00000605470 343 ntBASIC1.9□□□□□ -2.11
CHD1O14646 AP005137.2-201ENST00000609238 400 ntBASIC1.9□□□□□ -2.11
CHD1O14646 AC116618.1-201ENST00000634617 774 ntBASIC1.9□□□□□ -2.11
CHD1O14646 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
CHD1O14646 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.89□□□□□ -2.11
CHD1O14646 LAMTOR3P1-201ENST00000428620 370 ntBASIC1.89□□□□□ -2.11
CHD1O14646 TPMTP4-201ENST00000450749 678 ntBASIC1.89□□□□□ -2.11
CHD1O14646 RPL30P11-201ENST00000495304 339 ntBASIC1.89□□□□□ -2.11
CHD1O14646 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC1.89□□□□□ -2.11
CHD1O14646 AC108078.1-201ENST00000508073 725 ntBASIC1.89□□□□□ -2.11
CHD1O14646 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.89□□□□□ -2.11
CHD1O14646 VN1R81P-201ENST00000602085 372 ntBASIC1.89□□□□□ -2.11
CHD1O14646 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC1.89□□□□□ -2.11
CHD1O14646 AC111188.2-201ENST00000529697 1387 ntBASIC1.89□□□□□ -2.11
CHD1O14646 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.89□□□□□ -2.11
CHD1O14646 RNU6-37P-201ENST00000362692 107 ntBASIC1.88□□□□□ -2.11
CHD1O14646 RNA5SP457-201ENST00000363657 124 ntBASIC1.88□□□□□ -2.11
CHD1O14646 RNU6-11P-201ENST00000364234 107 ntBASIC1.88□□□□□ -2.11
CHD1O14646 MIR17-201ENST00000385012 84 ntBASIC1.88□□□□□ -2.11
CHD1O14646 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.88□□□□□ -2.11
CHD1O14646 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.88□□□□□ -2.11
CHD1O14646 HMGB1P46-201ENST00000520062 610 ntBASIC1.88□□□□□ -2.11
CHD1O14646 AC008739.2-201ENST00000597006 317 ntBASIC1.88□□□□□ -2.11
CHD1O14646 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
CHD1O14646 MTND4P11-201ENST00000417020 1058 ntBASIC1.88□□□□□ -2.11
CHD1O14646 CYCSP48-201ENST00000417124 323 ntBASIC1.88□□□□□ -2.11
CHD1O14646 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC1.88□□□□□ -2.11
CHD1O14646 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.88□□□□□ -2.11
CHD1O14646 AC092989.1-201ENST00000481235 277 ntBASIC1.88□□□□□ -2.11
CHD1O14646 NCOR1P1-202ENST00000486162 291 ntBASIC1.88□□□□□ -2.11
CHD1O14646 MTCO2P9-201ENST00000503214 694 ntBASIC1.88□□□□□ -2.11
CHD1O14646 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CHD1O14646 AC114322.1-201ENST00000506771 926 ntBASIC1.88□□□□□ -2.11
CHD1O14646 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.88□□□□□ -2.11
CHD1O14646 AC233266.2-201ENST00000567067 528 ntBASIC1.88□□□□□ -2.11
CHD1O14646 AC008962.1-201ENST00000605729 304 ntBASIC1.88□□□□□ -2.11
CHD1O14646 AL138955.1-201ENST00000622881 1040 ntBASIC1.88□□□□□ -2.11
CHD1O14646 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CHD1O14646 SNRPEP10-201ENST00000420249 274 ntBASIC1.87□□□□□ -2.11
CHD1O14646 ANP32BP3-201ENST00000559213 706 ntBASIC1.87□□□□□ -2.11
CHD1O14646 CYP3A137P-201ENST00000562436 69 ntBASIC1.87□□□□□ -2.11
CHD1O14646 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.87□□□□□ -2.11
CHD1O14646 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CHD1O14646 RBBP8P1-201ENST00000449447 1844 ntBASIC1.86□□□□□ -2.11
CHD1O14646 RNU6-317P-201ENST00000384031 107 ntBASIC1.86□□□□□ -2.11
CHD1O14646 RNU6-1181P-201ENST00000384191 106 ntBASIC1.86□□□□□ -2.11
CHD1O14646 RNU6-532P-201ENST00000384318 107 ntBASIC1.86□□□□□ -2.11
CHD1O14646 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.86□□□□□ -2.11
CHD1O14646 RNU7-27P-201ENST00000459281 62 ntBASIC1.86□□□□□ -2.11
CHD1O14646 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.86□□□□□ -2.11
CHD1O14646 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC1.86□□□□□ -2.11
CHD1O14646 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.86□□□□□ -2.11
CHD1O14646 AC023790.1-201ENST00000482174 347 ntBASIC1.86□□□□□ -2.11
CHD1O14646 MTCO3P35-201ENST00000485582 781 ntBASIC1.86□□□□□ -2.11
CHD1O14646 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC1.86□□□□□ -2.11
CHD1O14646 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.86□□□□□ -2.11
CHD1O14646 AC105245.1-201ENST00000581934 244 ntBASIC1.86□□□□□ -2.11
CHD1O14646 AC009090.3-201ENST00000616553 565 ntBASIC1.86□□□□□ -2.11
CHD1O14646 AC139769.3-201ENST00000618383 175 ntBASIC1.86□□□□□ -2.11
CHD1O14646 AC010889.1-201ENST00000566193 2666 ntBASIC1.85□□□□□ -2.11
CHD1O14646 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CHD1O14646 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CHD1O14646 OR9N1P-202ENST00000494289 481 ntBASIC1.85□□□□□ -2.11
CHD1O14646 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.85□□□□□ -2.11
CHD1O14646 AC105313.1-201ENST00000509121 353 ntBASIC1.85□□□□□ -2.11
CHD1O14646 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms