Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
RTCAO00442 MIR6075-201ENST00000620782 95 ntBASIC3.07□□□□□ -1.92
RTCAO00442 AC019226.1-201ENST00000625666 515 ntBASIC3.07□□□□□ -1.92
RTCAO00442 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
RTCAO00442 MTND4P4-201ENST00000439033 1366 ntBASIC3.07□□□□□ -1.92
RTCAO00442 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.07□□□□□ -1.92
RTCAO00442 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.07□□□□□ -1.92
RTCAO00442 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.07□□□□□ -1.92
RTCAO00442 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
RTCAO00442 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
RTCAO00442 AL161431.1-201ENST00000618966 4205 ntBASIC3.07□□□□□ -1.92
RTCAO00442 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
RTCAO00442 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.06□□□□□ -1.92
RTCAO00442 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
RTCAO00442 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
RTCAO00442 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.06□□□□□ -1.92
RTCAO00442 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
RTCAO00442 RNU5F-6P-201ENST00000362979 116 ntBASIC3.06□□□□□ -1.92
RTCAO00442 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
RTCAO00442 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
RTCAO00442 RNVU1-14-201ENST00000384770 164 ntBASIC3.06□□□□□ -1.92
RTCAO00442 U8.14-201ENST00000390843 143 ntBASIC3.06□□□□□ -1.92
RTCAO00442 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
RTCAO00442 AL512633.1-201ENST00000399931 655 ntBASIC3.06□□□□□ -1.92
RTCAO00442 AL513331.1-201ENST00000411908 397 ntBASIC3.06□□□□□ -1.92
RTCAO00442 BX682237.1-201ENST00000415016 335 ntBASIC3.06□□□□□ -1.92
RTCAO00442 AC092427.1-202ENST00000430569 476 ntBASIC3.06□□□□□ -1.92
RTCAO00442 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.06□□□□□ -1.92
RTCAO00442 AC098826.1-201ENST00000433943 471 ntBASIC3.06□□□□□ -1.92
RTCAO00442 UBE2D3P4-201ENST00000441973 436 ntBASIC3.06□□□□□ -1.92
RTCAO00442 GDI2P2-201ENST00000445131 608 ntBASIC3.06□□□□□ -1.92
RTCAO00442 Z75741.1-201ENST00000446793 314 ntBASIC3.06□□□□□ -1.92
RTCAO00442 WASF1P1-201ENST00000447560 1131 ntBASIC3.06□□□□□ -1.92
RTCAO00442 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.06□□□□□ -1.92
RTCAO00442 RPL23AP41-201ENST00000484754 458 ntBASIC3.06□□□□□ -1.92
RTCAO00442 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.06□□□□□ -1.92
RTCAO00442 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.06□□□□□ -1.92
RTCAO00442 AC114786.4-201ENST00000508771 728 ntBASIC3.06□□□□□ -1.92
RTCAO00442 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.06□□□□□ -1.92
RTCAO00442 AC114797.1-201ENST00000514003 728 ntBASIC3.06□□□□□ -1.92
RTCAO00442 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.06□□□□□ -1.92
RTCAO00442 RNU1-143P-201ENST00000516296 146 ntBASIC3.06□□□□□ -1.92
RTCAO00442 SNORA64.4-201ENST00000516632 81 ntBASIC3.06□□□□□ -1.92
RTCAO00442 RNU6-201P-201ENST00000517100 61 ntBASIC3.06□□□□□ -1.92
RTCAO00442 RN7SKP40-201ENST00000517211 242 ntBASIC3.06□□□□□ -1.92
RTCAO00442 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.06□□□□□ -1.92
RTCAO00442 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
RTCAO00442 AC012435.1-202ENST00000568772 240 ntBASIC3.06□□□□□ -1.92
RTCAO00442 ROCK1P1-201ENST00000573767 549 ntBASIC3.06□□□□□ -1.92
RTCAO00442 AC103810.1-201ENST00000579873 453 ntBASIC3.06□□□□□ -1.92
RTCAO00442 CKS1BP3-201ENST00000600888 237 ntBASIC3.06□□□□□ -1.92
RTCAO00442 AC073657.2-201ENST00000605661 303 ntBASIC3.06□□□□□ -1.92
RTCAO00442 MIR92B-201ENST00000607575 96 ntBASIC3.06□□□□□ -1.92
RTCAO00442 U1.23-201ENST00000610293 146 ntBASIC3.06□□□□□ -1.92
RTCAO00442 AC100793.4-201ENST00000613683 429 ntBASIC3.06□□□□□ -1.92
RTCAO00442 RNU1-68P-201ENST00000615382 146 ntBASIC3.06□□□□□ -1.92
RTCAO00442 U1.39-201ENST00000621562 146 ntBASIC3.06□□□□□ -1.92
RTCAO00442 AC004972.1-201ENST00000623934 2209 ntBASIC3.06□□□□□ -1.92
RTCAO00442 AC007494.3-201ENST00000624660 743 ntBASIC3.06□□□□□ -1.92
RTCAO00442 MTND1P37-201ENST00000636562 264 ntBASIC3.06□□□□□ -1.92
RTCAO00442 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.06□□□□□ -1.92
RTCAO00442 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
RTCAO00442 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
RTCAO00442 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
RTCAO00442 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.05□□□□□ -1.92
RTCAO00442 SNORD56.3-201ENST00000363507 71 ntBASIC3.05□□□□□ -1.92
RTCAO00442 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
RTCAO00442 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.05□□□□□ -1.92
RTCAO00442 RNU1-109P-201ENST00000383960 147 ntBASIC3.05□□□□□ -1.92
RTCAO00442 RNU6-114P-201ENST00000384704 105 ntBASIC3.05□□□□□ -1.92
RTCAO00442 AL109755.1-201ENST00000401791 649 ntBASIC3.05□□□□□ -1.92
RTCAO00442 AL513475.1-201ENST00000406602 315 ntBASIC3.05□□□□□ -1.92
RTCAO00442 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
RTCAO00442 RPL17P12-201ENST00000413391 526 ntBASIC3.05□□□□□ -1.92
RTCAO00442 NPM1P11-201ENST00000417106 855 ntBASIC3.05□□□□□ -1.92
RTCAO00442 AC005326.1-201ENST00000429197 123 ntBASIC3.05□□□□□ -1.92
RTCAO00442 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.05□□□□□ -1.92
RTCAO00442 MTND2P4-201ENST00000445034 1004 ntBASIC3.05□□□□□ -1.92
RTCAO00442 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.05□□□□□ -1.92
RTCAO00442 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.05□□□□□ -1.92
RTCAO00442 EPS15P1-201ENST00000448836 336 ntBASIC3.05□□□□□ -1.92
RTCAO00442 SNRPFP4-201ENST00000456366 242 ntBASIC3.05□□□□□ -1.92
RTCAO00442 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.05□□□□□ -1.92
RTCAO00442 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.05□□□□□ -1.92
RTCAO00442 RPPH1-2P-201ENST00000516688 293 ntBASIC3.05□□□□□ -1.92
RTCAO00442 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.05□□□□□ -1.92
RTCAO00442 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.05□□□□□ -1.92
RTCAO00442 TPMTP1-201ENST00000592307 737 ntBASIC3.05□□□□□ -1.92
RTCAO00442 AL590229.1-201ENST00000603497 542 ntBASIC3.05□□□□□ -1.92
RTCAO00442 Z94722.1-201ENST00000604328 474 ntBASIC3.05□□□□□ -1.92
RTCAO00442 AC239868.4-201ENST00000608318 671 ntBASIC3.05□□□□□ -1.92
RTCAO00442 AC069200.1-201ENST00000609511 323 ntBASIC3.05□□□□□ -1.92
RTCAO00442 uc_338.25-201ENST00000613756 156 ntBASIC3.05□□□□□ -1.92
RTCAO00442 AC104010.1-201ENST00000616889 150 ntBASIC3.05□□□□□ -1.92
RTCAO00442 AC012150.2-201ENST00000621300 544 ntBASIC3.05□□□□□ -1.92
RTCAO00442 AC091931.1-201ENST00000623488 728 ntBASIC3.05□□□□□ -1.92
RTCAO00442 AC026422.1-201ENST00000623961 452 ntBASIC3.05□□□□□ -1.92
RTCAO00442 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.05□□□□□ -1.92
RTCAO00442 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.05□□□□□ -1.92
RTCAO00442 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms