Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.2□□□□□ -2.22
CNOT1A5YKK6 AP005435.4-201ENST00000529514 284 ntBASIC1.2□□□□□ -2.22
CNOT1A5YKK6 AL132857.1-201ENST00000555180 708 ntBASIC1.2□□□□□ -2.22
CNOT1A5YKK6 MIR4295-201ENST00000585286 85 ntBASIC1.2□□□□□ -2.22
CNOT1A5YKK6 AC034236.3-201ENST00000605999 461 ntBASIC1.2□□□□□ -2.22
CNOT1A5YKK6 uc_338.9-201ENST00000617424 182 ntBASIC1.2□□□□□ -2.22
CNOT1A5YKK6 AC007275.1-201ENST00000621243 671 ntBASIC1.2□□□□□ -2.22
CNOT1A5YKK6 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
CNOT1A5YKK6 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
CNOT1A5YKK6 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.19□□□□□ -2.22
CNOT1A5YKK6 RNU6-997P-201ENST00000384725 107 ntBASIC1.19□□□□□ -2.22
CNOT1A5YKK6 SNRPEP2-201ENST00000397592 279 ntBASIC1.19□□□□□ -2.22
CNOT1A5YKK6 TATDN1P1-201ENST00000414123 891 ntBASIC1.19□□□□□ -2.22
CNOT1A5YKK6 CYCSP48-201ENST00000417124 323 ntBASIC1.19□□□□□ -2.22
CNOT1A5YKK6 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.19□□□□□ -2.22
CNOT1A5YKK6 TPRKBP1-201ENST00000456243 481 ntBASIC1.19□□□□□ -2.22
CNOT1A5YKK6 HMGB1P38-201ENST00000490557 577 ntBASIC1.19□□□□□ -2.22
CNOT1A5YKK6 MTND3P24-201ENST00000506306 329 ntBASIC1.19□□□□□ -2.22
CNOT1A5YKK6 RN7SKP265-201ENST00000516448 223 ntBASIC1.19□□□□□ -2.22
CNOT1A5YKK6 MIR514B-201ENST00000516774 80 ntBASIC1.19□□□□□ -2.22
CNOT1A5YKK6 AC025755.1-201ENST00000521306 278 ntBASIC1.19□□□□□ -2.22
CNOT1A5YKK6 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.19□□□□□ -2.22
CNOT1A5YKK6 AC109635.4-202ENST00000531666 412 ntBASIC1.19□□□□□ -2.22
CNOT1A5YKK6 HSPE1P3-201ENST00000559254 309 ntBASIC1.19□□□□□ -2.22
CNOT1A5YKK6 AC097504.2-201ENST00000608088 454 ntBASIC1.19□□□□□ -2.22
CNOT1A5YKK6 AC112503.2-201ENST00000609005 552 ntBASIC1.19□□□□□ -2.22
CNOT1A5YKK6 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.19□□□□□ -2.22
CNOT1A5YKK6 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
CNOT1A5YKK6 AC016769.3-201ENST00000396562 315 ntBASIC1.19□□□□□ -2.22
CNOT1A5YKK6 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.19□□□□□ -2.22
CNOT1A5YKK6 RPL27AP8-201ENST00000424277 446 ntBASIC1.19□□□□□ -2.22
CNOT1A5YKK6 AC004022.1-201ENST00000447766 1066 ntBASIC1.19□□□□□ -2.22
CNOT1A5YKK6 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
CNOT1A5YKK6 ARL2BPP4-201ENST00000506854 471 ntBASIC1.19□□□□□ -2.22
CNOT1A5YKK6 RNU11-2P-201ENST00000516898 142 ntBASIC1.19□□□□□ -2.22
CNOT1A5YKK6 AC090821.2-201ENST00000523552 176 ntBASIC1.19□□□□□ -2.22
CNOT1A5YKK6 AC022690.1-201ENST00000526681 550 ntBASIC1.19□□□□□ -2.22
CNOT1A5YKK6 AC233266.2-201ENST00000567067 528 ntBASIC1.19□□□□□ -2.22
CNOT1A5YKK6 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC1.19□□□□□ -2.22
CNOT1A5YKK6 FAM106CP-201ENST00000582212 507 ntBASIC1.19□□□□□ -2.22
CNOT1A5YKK6 MTND4P31-201ENST00000425607 1343 ntBASIC1.18□□□□□ -2.22
CNOT1A5YKK6 Y_RNA.518-201ENST00000384552 113 ntBASIC1.18□□□□□ -2.22
CNOT1A5YKK6 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
CNOT1A5YKK6 MORF4L1P7-201ENST00000426038 703 ntBASIC1.18□□□□□ -2.22
CNOT1A5YKK6 ZNF965P-201ENST00000432501 817 ntBASIC1.18□□□□□ -2.22
CNOT1A5YKK6 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.18□□□□□ -2.22
CNOT1A5YKK6 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC1.18□□□□□ -2.22
CNOT1A5YKK6 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.18□□□□□ -2.22
CNOT1A5YKK6 NBEAP1-201ENST00000554452 979 ntBASIC1.18□□□□□ -2.22
CNOT1A5YKK6 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.18□□□□□ -2.22
CNOT1A5YKK6 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.18□□□□□ -2.22
CNOT1A5YKK6 AL138880.2-201ENST00000616214 239 ntBASIC1.18□□□□□ -2.22
CNOT1A5YKK6 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.18□□□□□ -2.22
CNOT1A5YKK6 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
CNOT1A5YKK6 AP001350.1-201ENST00000601906 1524 ntBASIC1.18□□□□□ -2.22
CNOT1A5YKK6 AC011477.1-204ENST00000623416 1325 ntBASIC1.18□□□□□ -2.22
CNOT1A5YKK6 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.18□□□□□ -2.22
CNOT1A5YKK6 SNORD23.1-201ENST00000408212 104 ntBASIC1.18□□□□□ -2.22
CNOT1A5YKK6 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC1.18□□□□□ -2.22
CNOT1A5YKK6 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.18□□□□□ -2.22
CNOT1A5YKK6 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.18□□□□□ -2.22
CNOT1A5YKK6 SSXP4-201ENST00000451349 245 ntBASIC1.18□□□□□ -2.22
CNOT1A5YKK6 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC1.18□□□□□ -2.22
CNOT1A5YKK6 AC093281.2-201ENST00000510153 597 ntBASIC1.18□□□□□ -2.22
CNOT1A5YKK6 AC093752.1-206ENST00000511823 336 ntBASIC1.18□□□□□ -2.22
CNOT1A5YKK6 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.18□□□□□ -2.22
CNOT1A5YKK6 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.18□□□□□ -2.22
CNOT1A5YKK6 AC087808.1-201ENST00000520501 361 ntBASIC1.18□□□□□ -2.22
CNOT1A5YKK6 EEF1B2P4-201ENST00000551398 348 ntBASIC1.18□□□□□ -2.22
CNOT1A5YKK6 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.18□□□□□ -2.22
CNOT1A5YKK6 AL031601.2-202ENST00000622650 282 ntBASIC1.18□□□□□ -2.22
CNOT1A5YKK6 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.17□□□□□ -2.22
CNOT1A5YKK6 ZNF519P1-201ENST00000449011 1626 ntBASIC1.17□□□□□ -2.22
CNOT1A5YKK6 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
CNOT1A5YKK6 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
CNOT1A5YKK6 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.17□□□□□ -2.22
CNOT1A5YKK6 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.17□□□□□ -2.22
CNOT1A5YKK6 SNRPEP4-201ENST00000435815 279 ntBASIC1.17□□□□□ -2.22
CNOT1A5YKK6 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC1.17□□□□□ -2.22
CNOT1A5YKK6 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC1.17□□□□□ -2.22
CNOT1A5YKK6 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC1.17□□□□□ -2.22
CNOT1A5YKK6 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC1.17□□□□□ -2.22
CNOT1A5YKK6 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.17□□□□□ -2.22
CNOT1A5YKK6 AC068831.7-201ENST00000616954 363 ntBASIC1.17□□□□□ -2.22
CNOT1A5YKK6 AP003122.6-201ENST00000623831 495 ntBASIC1.17□□□□□ -2.22
CNOT1A5YKK6 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC1.17□□□□□ -2.22
CNOT1A5YKK6 AC090740.1-201ENST00000623193 2262 ntBASIC1.17□□□□□ -2.22
CNOT1A5YKK6 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.17□□□□□ -2.22
CNOT1A5YKK6 AL137003.2-201ENST00000606924 2538 ntBASIC1.17□□□□□ -2.22
CNOT1A5YKK6 RNU4-52P-201ENST00000384209 138 ntBASIC1.16□□□□□ -2.22
CNOT1A5YKK6 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.16□□□□□ -2.22
CNOT1A5YKK6 AL360221.1-201ENST00000445989 335 ntBASIC1.16□□□□□ -2.22
CNOT1A5YKK6 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.16□□□□□ -2.22
CNOT1A5YKK6 MTCO1P47-201ENST00000523889 1271 ntBASIC1.16□□□□□ -2.22
CNOT1A5YKK6 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.16□□□□□ -2.22
CNOT1A5YKK6 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.16□□□□□ -2.22
CNOT1A5YKK6 AC005498.1-201ENST00000592125 465 ntBASIC1.16□□□□□ -2.22
CNOT1A5YKK6 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.16□□□□□ -2.22
CNOT1A5YKK6 DUXAP11-201ENST00000603858 526 ntBASIC1.16□□□□□ -2.22
CNOT1A5YKK6 BNIP3P7-201ENST00000605641 516 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms